RNA–Protein interactions for RNA: ENST00000315684.12

CTC1-201, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTC1, Length 7,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-201ENST00000315684 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.84□□□□□ -0.831e-323■■■■□ 24.2
CTC1-201ENST00000315684 NSUN2Q08J23 767 aaKnown RBP eCLIP9.66□□□□□ -0.861e-323■■■■■ 1506.6
CTC1-201ENST00000315684 DDX3XO00571 662 aaKnown RBP eCLIP9.22□□□□□ -0.932e-75■□□□□ 10.6
CTC1-201ENST00000315684 SMNDC1O75940 238 aaKnown RBP eCLIP8.97□□□□□ -0.975e-46■■■■□ 21.6
CTC1-201ENST00000315684 PABPC4Q13310 644 aaKnown RBP eCLIP10.25□□□□□ -0.771e-38■■□□□ 12.2
CTC1-201ENST00000315684 NPM1P06748 294 aaKnown RBP eCLIP13.2□□□□□ -0.33e-25■■■■■ 32.4
CTC1-201ENST00000315684 YWHAGP61981 247 aaKnown RBP eCLIP9.67□□□□□ -0.866e-25■□□□□ 9.9
CTC1-201ENST00000315684 U2AF1Q01081 240 aaKnown RBP eCLIP11.73□□□□□ -0.531e-10■■■■□ 19.8
CTC1-201ENST00000315684 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.89□□□□□ -0.835e-10■■■■□ 25.2
CTC1-201ENST00000315684 XRCC6P12956 609 aaKnown RBP eCLIP9.95□□□□□ -0.826e-10■■■■□ 23.9
CTC1-201ENST00000315684 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.91□□□□□ -0.988e-10■■□□□ 13
CTC1-201ENST00000315684 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.57□□□□□ -0.881e-9■□□□□ 8.8
CTC1-201ENST00000315684 WRNQ14191 1432 aaPredicted RBP eCLIP12.43□□□□□ -0.422e-9■■■■■ 37.2
CTC1-201ENST00000315684 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.56□□□□□ -1.22e-9■■■■■ 27.1
CTC1-201ENST00000315684 NONOQ15233 471 aaKnown RBP eCLIP10.13□□□□□ -0.791e-8■■■■■ 38.3
CTC1-201ENST00000315684 SF3B1O75533 1304 aaKnown RBP eCLIP9.4□□□□□ -0.94e-8■■■■■ 85.2
CTC1-201ENST00000315684 RBM15Q96T37 977 aaKnown RBP eCLIP9.27□□□□□ -0.935e-8■■■■□ 26.5
CTC1-201ENST00000315684 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.13□□□□□ -0.635e-8■■■■□ 24.2
CTC1-201ENST00000315684 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.41□□□□□ -0.96e-8■□□□□ 10.2
CTC1-201ENST00000315684 U2AF2P26368 475 aaKnown RBP eCLIP9.56□□□□□ -0.888e-8■■■■■ 28.7
CTC1-201ENST00000315684 ZNF622Q969S3 477 aaKnown RBP eCLIP11.09□□□□□ -0.631e-7■■■■■ 29.8
CTC1-201ENST00000315684 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.59□□□□□ -0.712e-7■■■□□ 15.1
CTC1-201ENST00000315684 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.62□□□□□ -1.034e-7■■□□□ 12.7
CTC1-201ENST00000315684 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.72□□□□□ -0.694e-7■■■■■ 130
CTC1-201ENST00000315684 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.32□□□□□ -0.925e-7■■■■□ 25.4
CTC1-201ENST00000315684 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.19□□□□□ -0.786e-7■■□□□ 12.6
CTC1-201ENST00000315684 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.96□□□□□ -0.336e-7■■■□□ 19.2
CTC1-201ENST00000315684 SF3B4Q15427 424 aaKnown RBP eCLIP8.49□□□□□ -1.056e-7■■■■■ 26.8
CTC1-201ENST00000315684 AARSP49588 968 aaKnown RBP eCLIP9.2□□□□□ -0.947e-7■■■■□ 22.3
CTC1-201ENST00000315684 SND1Q7KZF4 910 aaKnown RBP eCLIP9.92□□□□□ -0.821e-6■■□□□ 13
CTC1-201ENST00000315684 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.61□□□□□ -1.032e-6■■□□□ 11.5
CTC1-201ENST00000315684 EFTUD2Q15029 972 aaKnown RBP eCLIP9.26□□□□□ -0.932e-6■■■■□ 19.6
CTC1-201ENST00000315684 NIPBLQ6KC79 2804 aaeCLIP5.35□□□□□ -1.552e-6■■■■■ 44.5
CTC1-201ENST00000315684 DDX6P26196 483 aaKnown RBP eCLIP9.01□□□□□ -0.974e-6■□□□□ 10.2
CTC1-201ENST00000315684 SF3A3Q12874 501 aaKnown RBP eCLIP9.82□□□□□ -0.844e-6■■■□□ 17.5
CTC1-201ENST00000315684 PPIGQ13427 754 aaKnown RBP eCLIP9.43□□□□□ -0.94e-6■■■□□ 15.7
CTC1-201ENST00000315684 HNRNPMP52272 730 aaKnown RBP eCLIP12.16□□□□□ -0.464e-6■□□□□ 9.5
CTC1-201ENST00000315684 AQRO60306 1485 aaKnown RBP eCLIP12.01□□□□□ -0.496e-6■■■■□ 25.1
CTC1-201ENST00000315684 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.88□□□□□ -0.676e-6■■■□□ 19.2
CTC1-201ENST00000315684 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10□□□□□ -0.817e-6■■■■□ 21
Retrieved 40 of 40 RNA–protein pairs in 20.7 ms