RNA–Protein interactions for RNA: ENST00000301764.11

DDB1-201, Transcript of damage specific DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDB1, Length 4,506 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-201ENST00000301764 ABCB4P21439 1286 aa16.85■□□□□ 0.29
DDB1-201ENST00000301764 TET3O43151 1660 aa16.85■□□□□ 0.29
DDB1-201ENST00000301764 PDE8AO60658 829 aa16.85■□□□□ 0.29
DDB1-201ENST00000301764 PLS1Q14651 629 aa16.85■□□□□ 0.29
DDB1-201ENST00000301764 RAD9BQ6WBX8 426 aa16.85■□□□□ 0.29
DDB1-201ENST00000301764 RNF26Q9BY78 433 aaPredicted RBP16.85■□□□□ 0.29
DDB1-201ENST00000301764 IQCGQ9H095 443 aaKnown RBP16.85■□□□□ 0.29
DDB1-201ENST00000301764 ASIC3Q9UHC3 531 aa16.85■□□□□ 0.29
DDB1-201ENST00000301764 CTNND1O60716 968 aaKnown RBP16.85■□□□□ 0.29
DDB1-201ENST00000301764 EEF2P13639 858 aaKnown RBP16.85■□□□□ 0.29
DDB1-201ENST00000301764 CCDC105Q8IYK2 499 aa16.85■□□□□ 0.29
DDB1-201ENST00000301764 NOA1Q8NC60 698 aaKnown RBP16.85■□□□□ 0.29
DDB1-201ENST00000301764 EXOC5O00471 708 aa16.84■□□□□ 0.29
DDB1-201ENST00000301764 KSR1Q8IVT5 923 aa16.84■□□□□ 0.29
DDB1-201ENST00000301764 RAB17Q9H0T7 212 aa16.84■□□□□ 0.29
DDB1-201ENST00000301764 PSD3Q9NYI0 1048 aa16.84■□□□□ 0.29
DDB1-201ENST00000301764 CTTNBP2NLQ9P2B4 639 aa16.84■□□□□ 0.29
DDB1-201ENST00000301764 DNAJC10Q8IXB1 793 aa16.84■□□□□ 0.29
DDB1-201ENST00000301764 CCDC197Q8NCU1 140 aa16.84■□□□□ 0.29
DDB1-201ENST00000301764 ARHGEF2Q92974 986 aaKnown RBP16.84■□□□□ 0.29
DDB1-201ENST00000301764 HIP1RO75146 1068 aa16.84■□□□□ 0.29
DDB1-201ENST00000301764 FAM13AO94988 1023 aa16.84■□□□□ 0.29
DDB1-201ENST00000301764 EPB41P11171 864 aaKnown RBP16.84■□□□□ 0.29
DDB1-201ENST00000301764 LTKP29376 864 aa16.84■□□□□ 0.29
DDB1-201ENST00000301764 MB21D1Q8N884 522 aa16.84■□□□□ 0.29
DDB1-201ENST00000301764 RETREG2Q8NC44 543 aa16.84■□□□□ 0.29
DDB1-201ENST00000301764 U2AF1L4Q8WU68 220 aaKnown RBP16.84■□□□□ 0.29
DDB1-201ENST00000301764 ARHGAP31Q2M1Z3 1444 aa16.84■□□□□ 0.29
DDB1-201ENST00000301764 ESYT3A0FGR9 886 aa16.84■□□□□ 0.29
DDB1-201ENST00000301764 PRKAB2O43741 272 aa16.84■□□□□ 0.29
DDB1-201ENST00000301764 ATP1A1P05023 1023 aaKnown RBP16.84■□□□□ 0.29
DDB1-201ENST00000301764 ATP5DP30049 168 aa16.84■□□□□ 0.29
DDB1-201ENST00000301764 GBP1P32455 592 aa16.84■□□□□ 0.29
DDB1-201ENST00000301764 LONP1P36776 959 aaKnown RBP16.84■□□□□ 0.29
DDB1-201ENST00000301764 TFAP4Q01664 338 aa16.84■□□□□ 0.29
DDB1-201ENST00000301764 KRT25Q7Z3Z0 450 aa16.84■□□□□ 0.29
DDB1-201ENST00000301764 PPP1R14CQ8TAE6 165 aa16.84■□□□□ 0.29
DDB1-201ENST00000301764 STMN2Q93045 179 aa16.84■□□□□ 0.29
DDB1-201ENST00000301764 PLCB1Q9NQ66 1216 aa16.84■□□□□ 0.29
DDB1-201ENST00000301764 SHROOM2Q13796 1616 aa16.84■□□□□ 0.29
DDB1-201ENST00000301764 USP42Q9H9J4 1324 aaKnown RBP16.83■□□□□ 0.29
DDB1-201ENST00000301764 TTC26A0AVF1 554 aa16.83■□□□□ 0.29
DDB1-201ENST00000301764 TRIM49BA6NDI0 452 aa16.83■□□□□ 0.29
DDB1-201ENST00000301764 CDC27P30260 824 aa16.83■□□□□ 0.29
DDB1-201ENST00000301764 ADD2P35612 726 aa16.83■□□□□ 0.29
DDB1-201ENST00000301764 EXOSC10Q01780 885 aaKnown RBP16.83■□□□□ 0.29
DDB1-201ENST00000301764 CCDC174Q6PII3 467 aa16.83■□□□□ 0.29
DDB1-201ENST00000301764 AEBP2Q6ZN18 517 aaPredicted RBP16.83■□□□□ 0.29
DDB1-201ENST00000301764 AMFRQ9UKV5 643 aa16.83■□□□□ 0.29
DDB1-201ENST00000301764 NOVA2Q9UNW9 492 aaKnown RBP16.83■□□□□ 0.29
DDB1-201ENST00000301764 CTDNEP1O95476 244 aa16.83■□□□□ 0.28
DDB1-201ENST00000301764 GUCY2CP25092 1073 aa16.83■□□□□ 0.28
DDB1-201ENST00000301764 TSNAXIP1Q2TAA8 658 aa16.83■□□□□ 0.28
DDB1-201ENST00000301764 P2RX5Q93086 422 aa16.83■□□□□ 0.28
DDB1-201ENST00000301764 TULP4Q9NRJ4 1543 aa16.83■□□□□ 0.28
DDB1-201ENST00000301764 CALCRLQ16602 461 aa16.83■□□□□ 0.28
DDB1-201ENST00000301764 CCDC38Q502W7 563 aa16.83■□□□□ 0.28
DDB1-201ENST00000301764 SAP30BPQ9UHR5 308 aaKnown RBP16.83■□□□□ 0.28
DDB1-201ENST00000301764 SALL3Q9BXA9 1300 aa16.83■□□□□ 0.28
DDB1-201ENST00000301764 PHKG2P15735 406 aa16.82■□□□□ 0.28
DDB1-201ENST00000301764 KIF11P52732 1056 aa16.82■□□□□ 0.28
DDB1-201ENST00000301764 PICALMQ13492 652 aa16.82■□□□□ 0.28
DDB1-201ENST00000301764 TNIP1Q15025 636 aa16.82■□□□□ 0.28
DDB1-201ENST00000301764 SYCE1Q8N0S2 351 aa16.82■□□□□ 0.28
DDB1-201ENST00000301764 MMS19Q96T76 1030 aa16.82■□□□□ 0.28
DDB1-201ENST00000301764 INTS9Q9NV88 658 aaKnown RBP16.82■□□□□ 0.28
DDB1-201ENST00000301764 ZNF446Q9NWS9 450 aa16.82■□□□□ 0.28
DDB1-201ENST00000301764 CDC42BPBQ9Y5S2 1711 aa16.82■□□□□ 0.28
DDB1-201ENST00000301764 C6orf229H3BNL8 230 aa16.82■□□□□ 0.28
DDB1-201ENST00000301764 ATP2A1O14983 1001 aa16.82■□□□□ 0.28
DDB1-201ENST00000301764 FXR1P51114 621 aaKnown RBP eCLIP16.82■□□□□ 0.281e-6■■■□□ 17.1
DDB1-201ENST00000301764 ZNF131P52739 623 aa16.82■□□□□ 0.28
DDB1-201ENST00000301764 CUL4BQ13620 913 aa16.82■□□□□ 0.28
DDB1-201ENST00000301764 DDX12PQ92771 950 aa16.82■□□□□ 0.28
DDB1-201ENST00000301764 CHP1Q99653 195 aa16.82■□□□□ 0.28
DDB1-201ENST00000301764 HOMER3Q9NSC5 361 aa16.82■□□□□ 0.28
DDB1-201ENST00000301764 ATP8A1Q9Y2Q0 1164 aa16.82■□□□□ 0.28
DDB1-201ENST00000301764 CD2APQ9Y5K6 639 aa16.82■□□□□ 0.28
DDB1-201ENST00000301764 H3BQF6 201 aa16.82■□□□□ 0.28
DDB1-201ENST00000301764 CROCCP2Q86T23 111 aa16.82■□□□□ 0.28
DDB1-201ENST00000301764 MYOCDQ8IZQ8 938 aa16.82■□□□□ 0.28
DDB1-201ENST00000301764 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.82■□□□□ 0.289e-7■■■□□ 16.8
DDB1-201ENST00000301764 TUBE1Q9UJT0 475 aa16.82■□□□□ 0.28
DDB1-201ENST00000301764 PCDHA13Q9Y5I0 950 aa16.82■□□□□ 0.28
DDB1-201ENST00000301764 SEMA3EO15041 775 aa16.82■□□□□ 0.28
DDB1-201ENST00000301764 STX2P32856 288 aa16.82■□□□□ 0.28
DDB1-201ENST00000301764 LIFRP42702 1097 aa16.82■□□□□ 0.28
DDB1-201ENST00000301764 BCAMP50895 628 aa16.82■□□□□ 0.28
DDB1-201ENST00000301764 USPL1Q5W0Q7 1092 aa16.82■□□□□ 0.28
DDB1-201ENST00000301764 CYB5R4Q7L1T6 521 aa16.82■□□□□ 0.28
DDB1-201ENST00000301764 TBC1D10CQ8IV04 446 aa16.82■□□□□ 0.28
DDB1-201ENST00000301764 MB21D2Q8IYB1 491 aaPredicted RBP16.82■□□□□ 0.28
DDB1-201ENST00000301764 SMC6Q96SB8 1091 aa16.82■□□□□ 0.28
DDB1-201ENST00000301764 PNKPQ96T60 521 aa16.82■□□□□ 0.28
DDB1-201ENST00000301764 IL2RBP14784 551 aa16.81■□□□□ 0.28
DDB1-201ENST00000301764 UBL4BQ8N7F7 174 aa16.81■□□□□ 0.28
DDB1-201ENST00000301764 OXER1Q8TDS5 423 aa16.81■□□□□ 0.28
DDB1-201ENST00000301764 GREM2Q9H772 168 aa16.81■□□□□ 0.28
DDB1-201ENST00000301764 SLC24A3Q9HC58 644 aa16.81■□□□□ 0.28
DDB1-201ENST00000301764 CRB1P82279 1406 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms