RNA–Protein interactions for RNA: ENST00000297792.9

KDM1B-201, Transcript of lysine demethylase 1B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene KDM1B, Length 3,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1B-201ENST00000297792 EXOC1Q9NV70 894 aa16.07■□□□□ 0.16
KDM1B-201ENST00000297792 RBM28Q9NW13 759 aaKnown RBP16.07■□□□□ 0.16
KDM1B-201ENST00000297792 MYBL2P10244 700 aa16.06■□□□□ 0.16
KDM1B-201ENST00000297792 USP5P45974 858 aa16.06■□□□□ 0.16
KDM1B-201ENST00000297792 CCT5P48643 541 aa16.06■□□□□ 0.16
KDM1B-201ENST00000297792 FAM182BQ5T319 152 aa16.06■□□□□ 0.16
KDM1B-201ENST00000297792 KCTD16Q68DU8 428 aa16.06■□□□□ 0.16
KDM1B-201ENST00000297792 HAUS4Q9H6D7 363 aa16.06■□□□□ 0.16
KDM1B-201ENST00000297792 SLC39A2Q9NP94 309 aa16.06■□□□□ 0.16
KDM1B-201ENST00000297792 LIMA1Q9UHB6 759 aaKnown RBP16.06■□□□□ 0.16
KDM1B-201ENST00000297792 BUB1O43683 1085 aa16.06■□□□□ 0.16
KDM1B-201ENST00000297792 KRT83P78385 493 aa16.06■□□□□ 0.16
KDM1B-201ENST00000297792 TFAP4Q01664 338 aa16.06■□□□□ 0.16
KDM1B-201ENST00000297792 BLIDQ8IZY5 108 aa16.06■□□□□ 0.16
KDM1B-201ENST00000297792 CCDC47Q96A33 483 aaKnown RBP16.06■□□□□ 0.16
KDM1B-201ENST00000297792 TMEM60Q9H2L4 133 aa16.06■□□□□ 0.16
KDM1B-201ENST00000297792 NHEJ1Q9H9Q4 299 aaPredicted RBP16.06■□□□□ 0.16
KDM1B-201ENST00000297792 FAM205AQ6ZU69 1335 aa16.06■□□□□ 0.16
KDM1B-201ENST00000297792 GOLGA6CA6NDK9 693 aa16.06■□□□□ 0.16
KDM1B-201ENST00000297792 GOLGA6BA6NDN3 693 aa16.06■□□□□ 0.16
KDM1B-201ENST00000297792 RCCD1A6NED2 376 aa16.06■□□□□ 0.16
KDM1B-201ENST00000297792 EIF3CLB5ME19 914 aaKnown RBP16.06■□□□□ 0.16
KDM1B-201ENST00000297792 GOLGA6DP0CG33 693 aa16.06■□□□□ 0.16
KDM1B-201ENST00000297792 HERVK_113P62684 666 aa16.06■□□□□ 0.16
KDM1B-201ENST00000297792 SH3RF1Q7Z6J0 888 aa16.06■□□□□ 0.16
KDM1B-201ENST00000297792 ANKRD18AQ8IVF6 992 aa16.06■□□□□ 0.16
KDM1B-201ENST00000297792 ZNF512BQ96KM6 892 aaPredicted RBP16.06■□□□□ 0.16
KDM1B-201ENST00000297792 EIF3CQ99613 913 aaKnown RBP16.06■□□□□ 0.16
KDM1B-201ENST00000297792 GOLGA6AQ9NYA3 693 aa16.06■□□□□ 0.16
KDM1B-201ENST00000297792 RAB21Q9UL25 225 aa16.06■□□□□ 0.16
KDM1B-201ENST00000297792 AKAP11Q9UKA4 1901 aa16.06■□□□□ 0.16
KDM1B-201ENST00000297792 LAMB4A4D0S4 1761 aa16.05■□□□□ 0.16
KDM1B-201ENST00000297792 ZEB2O60315 1214 aa16.05■□□□□ 0.16
KDM1B-201ENST00000297792 USP17L8P0C7I0 530 aa16.05■□□□□ 0.16
KDM1B-201ENST00000297792 FCER1AP12319 257 aa16.05■□□□□ 0.16
KDM1B-201ENST00000297792 INTS5Q6P9B9 1019 aaKnown RBP16.05■□□□□ 0.16
KDM1B-201ENST00000297792 SAP30BPQ9UHR5 308 aaKnown RBP16.05■□□□□ 0.16
KDM1B-201ENST00000297792 NCK2O43639 380 aa16.05■□□□□ 0.16
KDM1B-201ENST00000297792 MOCS3O95396 460 aa16.05■□□□□ 0.16
KDM1B-201ENST00000297792 PRDX5P30044 214 aa16.05■□□□□ 0.16
KDM1B-201ENST00000297792 ATP1A2P50993 1020 aa16.05■□□□□ 0.16
KDM1B-201ENST00000297792 TTC31Q49AM3 519 aaPredicted RBP16.05■□□□□ 0.16
KDM1B-201ENST00000297792 PDXDC2PQ6P474 469 aa16.05■□□□□ 0.16
KDM1B-201ENST00000297792 IFT81Q8WYA0 676 aa16.05■□□□□ 0.16
KDM1B-201ENST00000297792 SECISBP2LQ93073 1101 aaKnown RBP16.05■□□□□ 0.16
KDM1B-201ENST00000297792 CNOT6LQ96LI5 555 aaKnown RBP16.05■□□□□ 0.16
KDM1B-201ENST00000297792 SELENOOQ9BVL4 669 aa16.05■□□□□ 0.16
KDM1B-201ENST00000297792 SAMM50Q9Y512 469 aa16.05■□□□□ 0.16
KDM1B-201ENST00000297792 MARCH6O60337 910 aa16.05■□□□□ 0.16
KDM1B-201ENST00000297792 LIG3P49916 1009 aa16.05■□□□□ 0.16
KDM1B-201ENST00000297792 USP14P54578 494 aa16.05■□□□□ 0.16
KDM1B-201ENST00000297792 TRIM14Q14142 442 aa16.05■□□□□ 0.16
KDM1B-201ENST00000297792 LRRC31Q6UY01 552 aa16.05■□□□□ 0.16
KDM1B-201ENST00000297792 HNRNPLLQ8WVV9 542 aaKnown RBP16.05■□□□□ 0.16
KDM1B-201ENST00000297792 DISC1Q9NRI5 854 aa16.05■□□□□ 0.16
KDM1B-201ENST00000297792 USP17L3A6NCW0 530 aa16.04■□□□□ 0.16
KDM1B-201ENST00000297792 USP17L4A6NCW7 530 aa16.04■□□□□ 0.16
KDM1B-201ENST00000297792 H7C1D1 291 aa16.04■□□□□ 0.16
KDM1B-201ENST00000297792 CCNT1O60563 726 aaKnown RBP16.04■□□□□ 0.16
KDM1B-201ENST00000297792 ERFEQ4G0M1 354 aa16.04■□□□□ 0.16
KDM1B-201ENST00000297792 USP17L1Q7RTZ2 530 aa16.04■□□□□ 0.16
KDM1B-201ENST00000297792 DZIP1Q86YF9 867 aaKnown RBP16.04■□□□□ 0.16
KDM1B-201ENST00000297792 FAM76AQ8TAV0 307 aa16.04■□□□□ 0.16
KDM1B-201ENST00000297792 HDAC7Q8WUI4 952 aa16.04■□□□□ 0.16
KDM1B-201ENST00000297792 ZHX3Q9H4I2 956 aa16.04■□□□□ 0.16
KDM1B-201ENST00000297792 TCP11L1Q9NUJ3 509 aa16.04■□□□□ 0.16
KDM1B-201ENST00000297792 LMTK3Q96Q04 1460 aa16.04■□□□□ 0.16
KDM1B-201ENST00000297792 TECP42680 631 aa16.04■□□□□ 0.16
KDM1B-201ENST00000297792 SLC44A5Q8NCS7 719 aa16.04■□□□□ 0.16
KDM1B-201ENST00000297792 RRP36Q96EU6 259 aaKnown RBP16.04■□□□□ 0.16
KDM1B-201ENST00000297792 CCDC87Q9NVE4 849 aa16.04■□□□□ 0.16
KDM1B-201ENST00000297792 CNTNAP5Q8WYK1 1306 aa16.04■□□□□ 0.16
KDM1B-201ENST00000297792 LGALS16A8MUM7 142 aa16.04■□□□□ 0.16
KDM1B-201ENST00000297792 CALM1P0DP23 149 aa16.04■□□□□ 0.16
KDM1B-201ENST00000297792 CALM2P0DP24 149 aa16.04■□□□□ 0.16
KDM1B-201ENST00000297792 CALM3P0DP25 149 aa16.04■□□□□ 0.16
KDM1B-201ENST00000297792 IL6STP40189 918 aaPredicted RBP16.04■□□□□ 0.16
KDM1B-201ENST00000297792 CKAP4Q07065 602 aaKnown RBP16.04■□□□□ 0.16
KDM1B-201ENST00000297792 PTF1AQ7RTS3 328 aa16.04■□□□□ 0.16
KDM1B-201ENST00000297792 CACNA2D4Q7Z3S7 1137 aa16.04■□□□□ 0.16
KDM1B-201ENST00000297792 DHX37Q8IY37 1157 aaKnown RBP16.04■□□□□ 0.16
KDM1B-201ENST00000297792 NLRC4Q9NPP4 1024 aa16.04■□□□□ 0.16
KDM1B-201ENST00000297792 PNPLA7Q6ZV29 1317 aa16.03■□□□□ 0.16
KDM1B-201ENST00000297792 PDE2AO00408 941 aaPredicted RBP16.03■□□□□ 0.16
KDM1B-201ENST00000297792 IFIH1Q9BYX4 1025 aaKnown RBP16.03■□□□□ 0.16
KDM1B-201ENST00000297792 KANSL2Q9H9L4 492 aa16.03■□□□□ 0.16
KDM1B-201ENST00000297792 LOC102724428A0A0B4J2F2 783 aa16.03■□□□□ 0.16
KDM1B-201ENST00000297792 NKRFO15226 690 aaKnown RBP eCLIP16.03■□□□□ 0.16
KDM1B-201ENST00000297792 SIK1P57059 783 aa16.03■□□□□ 0.16
KDM1B-201ENST00000297792 E2F4Q16254 413 aa16.03■□□□□ 0.16
KDM1B-201ENST00000297792 NFRKBQ6P4R8 1299 aa16.03■□□□□ 0.16
KDM1B-201ENST00000297792 TMC4Q7Z404 712 aa16.03■□□□□ 0.16
KDM1B-201ENST00000297792 ELOA2Q8IYF1 753 aaPredicted RBP16.03■□□□□ 0.16
KDM1B-201ENST00000297792 CDK5RAP3Q96JB5 506 aa16.03■□□□□ 0.16
KDM1B-201ENST00000297792 CRNKL1Q9BZJ0 848 aaKnown RBP16.03■□□□□ 0.16
KDM1B-201ENST00000297792 ESYT3A0FGR9 886 aa16.03■□□□□ 0.16
KDM1B-201ENST00000297792 PLCG1P19174 1290 aa16.03■□□□□ 0.16
KDM1B-201ENST00000297792 KIF5BP33176 963 aa16.03■□□□□ 0.16
KDM1B-201ENST00000297792 TXKP42681 527 aa16.03■□□□□ 0.16
KDM1B-201ENST00000297792 PNMA1Q8ND90 353 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms