RNA–Protein interactions for RNA: ENST00000265343.9

AFF4-201, Transcript of AF4/FMR2 family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AFF4, Length 9,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF4-201ENST00000265343 AFAP1Q8N556 730 aa16.31■□□□□ 0.2
AFF4-201ENST00000265343 NDE1Q9NXR1 346 aa16.31■□□□□ 0.2
AFF4-201ENST00000265343 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.31■□□□□ 0.2
AFF4-201ENST00000265343 BLMP54132 1417 aaPredicted RBP16.31■□□□□ 0.2
AFF4-201ENST00000265343 IFNB1P01574 187 aa16.31■□□□□ 0.2
AFF4-201ENST00000265343 PNMA6AP0CW24 399 aaPredicted RBP16.31■□□□□ 0.2
AFF4-201ENST00000265343 NBPF20Q3BBV1 942 aa16.31■□□□□ 0.2
AFF4-201ENST00000265343 GSDMAQ96QA5 445 aa16.31■□□□□ 0.2
AFF4-201ENST00000265343 NYXQ9GZU5 481 aa16.31■□□□□ 0.2
AFF4-201ENST00000265343 MCM9Q9NXL9 1143 aa16.31■□□□□ 0.2
AFF4-201ENST00000265343 NR1I2O75469 434 aa16.3■□□□□ 0.2
AFF4-201ENST00000265343 TADA3O75528 432 aa16.3■□□□□ 0.2
AFF4-201ENST00000265343 PYGLP06737 847 aa16.3■□□□□ 0.2
AFF4-201ENST00000265343 CDC37L1Q7L3B6 337 aa16.3■□□□□ 0.2
AFF4-201ENST00000265343 TEX9Q8N6V9 391 aa16.3■□□□□ 0.2
AFF4-201ENST00000265343 APOA1P02647 267 aa16.3■□□□□ 0.2
AFF4-201ENST00000265343 TTLL12Q14166 644 aaPredicted RBP16.3■□□□□ 0.2
AFF4-201ENST00000265343 TRIM50Q86XT4 487 aa16.3■□□□□ 0.2
AFF4-201ENST00000265343 SCYL1Q96KG9 808 aa16.3■□□□□ 0.2
AFF4-201ENST00000265343 CUEDC2Q9H467 287 aa16.3■□□□□ 0.2
AFF4-201ENST00000265343 PPP1R12AO14974 1030 aaPredicted RBP16.3■□□□□ 0.2
AFF4-201ENST00000265343 SERPINB2P05120 415 aa16.3■□□□□ 0.2
AFF4-201ENST00000265343 MYL1P05976 194 aa16.3■□□□□ 0.2
AFF4-201ENST00000265343 KRT10P13645 584 aa16.3■□□□□ 0.2
AFF4-201ENST00000265343 LSM14BQ9BX40 385 aaKnown RBP16.3■□□□□ 0.2
AFF4-201ENST00000265343 RMDN2Q96LZ7 410 aa16.3■□□□□ 0.2
AFF4-201ENST00000265343 ACTN1P12814 892 aa16.3■□□□□ 0.2
AFF4-201ENST00000265343 PRG4Q92954 1404 aaPredicted RBP16.3■□□□□ 0.2
AFF4-201ENST00000265343 HERC4Q5GLZ8 1057 aaPredicted RBP16.3■□□□□ 0.2
AFF4-201ENST00000265343 SESTD1Q86VW0 696 aa16.3■□□□□ 0.2
AFF4-201ENST00000265343 TRIM33Q9UPN9 1127 aa16.3■□□□□ 0.2
AFF4-201ENST00000265343 DESI2Q9BSY9 194 aa16.29■□□□□ 0.2
AFF4-201ENST00000265343 ABCC1P33527 1531 aa16.29■□□□□ 0.2
AFF4-201ENST00000265343 GPC4O75487 556 aa16.29■□□□□ 0.2
AFF4-201ENST00000265343 KRT8P05787 483 aa16.29■□□□□ 0.2
AFF4-201ENST00000265343 BACH1O14867 736 aa16.29■□□□□ 0.2
AFF4-201ENST00000265343 EXOC3O60645 756 aa16.29■□□□□ 0.2
AFF4-201ENST00000265343 GADD45BO75293 160 aaPredicted RBP16.29■□□□□ 0.2
AFF4-201ENST00000265343 LONRF3Q496Y0 759 aa16.29■□□□□ 0.2
AFF4-201ENST00000265343 GALNT17Q6IS24 598 aa16.29■□□□□ 0.2
AFF4-201ENST00000265343 MYH8P13535 1937 aa16.29■□□□□ 0.2
AFF4-201ENST00000265343 TRPA1O75762 1119 aa16.29■□□□□ 0.2
AFF4-201ENST00000265343 RNF207Q6ZRF8 634 aa16.29■□□□□ 0.2
AFF4-201ENST00000265343 TDRD7Q8NHU6 1098 aaKnown RBP16.29■□□□□ 0.2
AFF4-201ENST00000265343 IKBKBO14920 756 aa16.29■□□□□ 0.2
AFF4-201ENST00000265343 SGSM2O43147 1006 aa16.29■□□□□ 0.2
AFF4-201ENST00000265343 POLR2BP30876 1174 aaKnown RBP16.29■□□□□ 0.2
AFF4-201ENST00000265343 NBPF3Q9H094 633 aa16.29■□□□□ 0.2
AFF4-201ENST00000265343 WASLO00401 505 aaPredicted RBP16.29■□□□□ 0.2
AFF4-201ENST00000265343 EIF3DO15371 548 aaKnown RBP eCLIP16.29■□□□□ 0.2
AFF4-201ENST00000265343 S100BP04271 92 aaPredicted RBP16.29■□□□□ 0.2
AFF4-201ENST00000265343 UGGT2Q9NYU1 1516 aa16.28■□□□□ 0.2
AFF4-201ENST00000265343 NNTQ13423 1086 aa16.28■□□□□ 0.2
AFF4-201ENST00000265343 SPATA1Q5VX52 437 aa16.28■□□□□ 0.2
AFF4-201ENST00000265343 RIMS2Q9UQ26 1411 aa16.28■□□□□ 0.2
AFF4-201ENST00000265343 KDM1AO60341 852 aa16.28■□□□□ 0.2
AFF4-201ENST00000265343 ICA1LQ8NDH6 482 aa16.28■□□□□ 0.2
AFF4-201ENST00000265343 ATP6V0A1Q93050 837 aa16.28■□□□□ 0.2
AFF4-201ENST00000265343 RIOK1Q9BRS2 568 aaKnown RBP16.28■□□□□ 0.2
AFF4-201ENST00000265343 ARHGAP26Q9UNA1 814 aa16.28■□□□□ 0.2
AFF4-201ENST00000265343 PNOCQ13519 176 aa16.28■□□□□ 0.2
AFF4-201ENST00000265343 SYCE1LA8MT33 242 aa16.28■□□□□ 0.2
AFF4-201ENST00000265343 ECE1P42892 770 aa16.28■□□□□ 0.2
AFF4-201ENST00000265343 ARHGDIAP52565 204 aa16.28■□□□□ 0.2
AFF4-201ENST00000265343 BPIFB4P59827 614 aa16.28■□□□□ 0.2
AFF4-201ENST00000265343 REXO1Q8N1G1 1221 aaKnown RBP16.28■□□□□ 0.2
AFF4-201ENST00000265343 ABCD1P33897 745 aa16.28■□□□□ 0.2
AFF4-201ENST00000265343 CLCN6P51797 869 aa16.28■□□□□ 0.2
AFF4-201ENST00000265343 TEX12Q9BXU0 123 aa16.28■□□□□ 0.2
AFF4-201ENST00000265343 DIABLOQ9NR28 239 aa16.28■□□□□ 0.2
AFF4-201ENST00000265343 HIBCHQ6NVY1 386 aaPredicted RBP16.28■□□□□ 0.2
AFF4-201ENST00000265343 PHKBQ93100 1093 aa16.28■□□□□ 0.2
AFF4-201ENST00000265343 USTQ9Y2C2 406 aa16.28■□□□□ 0.2
AFF4-201ENST00000265343 PRAG1Q86YV5 1406 aa16.28■□□□□ 0.2
AFF4-201ENST00000265343 HDAC11Q96DB2 347 aa16.28■□□□□ 0.2
AFF4-201ENST00000265343 ARMCX3Q9UH62 379 aaPredicted RBP16.28■□□□□ 0.2
AFF4-201ENST00000265343 ESRRBO95718 433 aa16.27■□□□□ 0.2
AFF4-201ENST00000265343 CASP8Q14790 479 aa16.27■□□□□ 0.2
AFF4-201ENST00000265343 EXOC5O00471 708 aa16.27■□□□□ 0.2
AFF4-201ENST00000265343 ESRRAP11474 423 aaPredicted RBP16.27■□□□□ 0.2
AFF4-201ENST00000265343 PRPSAP1Q14558 356 aa16.27■□□□□ 0.2
AFF4-201ENST00000265343 PCDHB13Q9Y5F0 798 aa16.27■□□□□ 0.2
AFF4-201ENST00000265343 IFT140Q96RY7 1462 aa16.27■□□□□ 0.2
AFF4-201ENST00000265343 BAZ2BQ9UIF8 2168 aaKnown RBP16.27■□□□□ 0.2
AFF4-201ENST00000265343 ESYT2A0FGR8 921 aa16.27■□□□□ 0.2
AFF4-201ENST00000265343 CMA1P23946 247 aa16.27■□□□□ 0.2
AFF4-201ENST00000265343 PIK3AP1Q6ZUJ8 805 aa16.27■□□□□ 0.2
AFF4-201ENST00000265343 GIPC2Q8TF65 315 aa16.27■□□□□ 0.2
AFF4-201ENST00000265343 ATF7P17544 494 aaPredicted RBP16.27■□□□□ 0.2
AFF4-201ENST00000265343 SIRT1Q96EB6 747 aa16.27■□□□□ 0.2
AFF4-201ENST00000265343 BABAM1Q9NWV8 329 aa16.27■□□□□ 0.2
AFF4-201ENST00000265343 HNRNPCL2B2RXH8 293 aa16.27■□□□□ 0.2
AFF4-201ENST00000265343 CHST3Q7LGC8 479 aa16.27■□□□□ 0.2
AFF4-201ENST00000265343 LAD1O00515 517 aa16.27■□□□□ 0.19
AFF4-201ENST00000265343 FAM186BQ8IYM0 893 aa16.27■□□□□ 0.19
AFF4-201ENST00000265343 NEK9Q8TD19 979 aa16.27■□□□□ 0.19
AFF4-201ENST00000265343 TTC25Q96NG3 672 aa16.27■□□□□ 0.19
AFF4-201ENST00000265343 PANX2Q96RD6 677 aa16.27■□□□□ 0.19
AFF4-201ENST00000265343 GRAMD1BQ3KR37 738 aa16.27■□□□□ 0.19
AFF4-201ENST00000265343 KRT39Q6A163 491 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms