RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 SLIT2O94813 1529 aa19.55■□□□□ 0.72
TRAM1-201ENST00000262213 TBC1D8BQ0IIM8 1120 aa19.54■□□□□ 0.72
TRAM1-201ENST00000262213 ZNF507Q8TCN5 953 aa19.54■□□□□ 0.72
TRAM1-201ENST00000262213 TUBGCP2Q9BSJ2 902 aa19.54■□□□□ 0.72
TRAM1-201ENST00000262213 TMEM60Q9H2L4 133 aa19.54■□□□□ 0.72
TRAM1-201ENST00000262213 MKRN1Q9UHC7 482 aaKnown RBP19.54■□□□□ 0.72
TRAM1-201ENST00000262213 JAG2Q9Y219 1238 aa19.54■□□□□ 0.72
TRAM1-201ENST00000262213 PSMA7O14818 248 aa19.54■□□□□ 0.72
TRAM1-201ENST00000262213 DDAH1O94760 285 aa19.54■□□□□ 0.72
TRAM1-201ENST00000262213 PRPF6O94906 941 aaKnown RBP19.54■□□□□ 0.72
TRAM1-201ENST00000262213 CYLC1P35663 651 aaPredicted RBP19.54■□□□□ 0.72
TRAM1-201ENST00000262213 UBA7P41226 1012 aa19.54■□□□□ 0.72
TRAM1-201ENST00000262213 EZH2Q15910 746 aaKnown RBP19.54■□□□□ 0.72
TRAM1-201ENST00000262213 NAALADL2Q58DX5 795 aa19.54■□□□□ 0.72
TRAM1-201ENST00000262213 CERS3Q8IU89 383 aa19.54■□□□□ 0.72
TRAM1-201ENST00000262213 ERVV-1B6SEH8 477 aa19.53■□□□□ 0.72
TRAM1-201ENST00000262213 PLEKP08567 350 aaPredicted RBP19.53■□□□□ 0.72
TRAM1-201ENST00000262213 LONP1P36776 959 aaKnown RBP19.53■□□□□ 0.72
TRAM1-201ENST00000262213 MTIF2P46199 727 aaKnown RBP19.53■□□□□ 0.72
TRAM1-201ENST00000262213 CKAP4Q07065 602 aaKnown RBP19.53■□□□□ 0.72
TRAM1-201ENST00000262213 CCDC178Q5BJE1 867 aa19.53■□□□□ 0.72
TRAM1-201ENST00000262213 PAPD7Q5XG87 772 aaKnown RBP19.53■□□□□ 0.72
TRAM1-201ENST00000262213 DTHD1Q6ZMT9 781 aa19.53■□□□□ 0.72
TRAM1-201ENST00000262213 BLIDQ8IZY5 108 aa19.53■□□□□ 0.72
TRAM1-201ENST00000262213 PYM1Q9BRP8 204 aaKnown RBP19.53■□□□□ 0.72
TRAM1-201ENST00000262213 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.53■□□□□ 0.72
TRAM1-201ENST00000262213 TSPY2A6NKD2 308 aa19.53■□□□□ 0.72
TRAM1-201ENST00000262213 NKRFO15226 690 aaKnown RBP eCLIP19.53■□□□□ 0.723e-8■■■□□ 17.6
TRAM1-201ENST00000262213 RPS6KA5O75582 802 aa19.53■□□□□ 0.72
TRAM1-201ENST00000262213 ERCC3P19447 782 aa19.53■□□□□ 0.72
TRAM1-201ENST00000262213 PFKFB3Q16875 520 aaPredicted RBP19.53■□□□□ 0.72
TRAM1-201ENST00000262213 EXOC1Q9NV70 894 aa19.53■□□□□ 0.72
TRAM1-201ENST00000262213 SMARCAL1Q9NZC9 954 aa19.53■□□□□ 0.72
TRAM1-201ENST00000262213 PDS5AQ29RF7 1337 aaKnown RBP19.52■□□□□ 0.72
TRAM1-201ENST00000262213 EEF1GP26641 437 aaKnown RBP19.52■□□□□ 0.72
TRAM1-201ENST00000262213 INF2Q27J81 1249 aa19.52■□□□□ 0.72
TRAM1-201ENST00000262213 CCDC96Q2M329 555 aa19.52■□□□□ 0.72
TRAM1-201ENST00000262213 TTC19Q6DKK2 380 aaPredicted RBP19.52■□□□□ 0.72
TRAM1-201ENST00000262213 LRWD1Q9UFC0 647 aa19.52■□□□□ 0.72
TRAM1-201ENST00000262213 NIP7Q9Y221 180 aaKnown RBP eCLIP19.52■□□□□ 0.72
TRAM1-201ENST00000262213 CCDC194A0A1B0GVG4 234 aa19.52■□□□□ 0.72
TRAM1-201ENST00000262213 IL6STP40189 918 aaPredicted RBP19.52■□□□□ 0.72
TRAM1-201ENST00000262213 AARSP49588 968 aaKnown RBP eCLIP19.52■□□□□ 0.72
TRAM1-201ENST00000262213 DNM2P50570 870 aa19.52■□□□□ 0.72
TRAM1-201ENST00000262213 DNAJC21Q5F1R6 531 aaKnown RBP19.52■□□□□ 0.72
TRAM1-201ENST00000262213 PACS2Q86VP3 889 aa19.52■□□□□ 0.72
TRAM1-201ENST00000262213 C4orf32Q8N8J7 132 aa19.52■□□□□ 0.72
TRAM1-201ENST00000262213 ZNF384Q8TF68 577 aa19.52■□□□□ 0.72
TRAM1-201ENST00000262213 HDAC7Q8WUI4 952 aa19.52■□□□□ 0.72
TRAM1-201ENST00000262213 VIPAS39Q9H9C1 493 aa19.52■□□□□ 0.72
TRAM1-201ENST00000262213 DUOX1Q9NRD9 1551 aa19.52■□□□□ 0.71
TRAM1-201ENST00000262213 ARAP2Q8WZ64 1704 aa19.51■□□□□ 0.71
TRAM1-201ENST00000262213 MCM3P25205 808 aa19.51■□□□□ 0.71
TRAM1-201ENST00000262213 TRAPPC10P48553 1259 aa19.51■□□□□ 0.71
TRAM1-201ENST00000262213 SND1Q7KZF4 910 aaKnown RBP eCLIP19.51■□□□□ 0.712e-8■■■■□ 22.9
TRAM1-201ENST00000262213 HPS3Q969F9 1004 aa19.51■□□□□ 0.71
TRAM1-201ENST00000262213 EHD4Q9H223 541 aa19.51■□□□□ 0.71
TRAM1-201ENST00000262213 ANKRD36CQ5JPF3 1778 aa19.51■□□□□ 0.71
TRAM1-201ENST00000262213 A0A1W2PQC6 194 aa19.51■□□□□ 0.71
TRAM1-201ENST00000262213 RASSF10A6NK89 507 aa19.51■□□□□ 0.71
TRAM1-201ENST00000262213 KLRC4O43908 158 aa19.51■□□□□ 0.71
TRAM1-201ENST00000262213 CXCR5P32302 372 aa19.51■□□□□ 0.71
TRAM1-201ENST00000262213 SLC7A5Q01650 507 aa19.51■□□□□ 0.71
TRAM1-201ENST00000262213 TTC31Q49AM3 519 aaPredicted RBP19.51■□□□□ 0.71
TRAM1-201ENST00000262213 CCNI2Q6ZMN8 369 aaPredicted RBP19.51■□□□□ 0.71
TRAM1-201ENST00000262213 STAG2Q8N3U4 1231 aa19.51■□□□□ 0.71
TRAM1-201ENST00000262213 LRRC15Q8TF66 581 aa19.51■□□□□ 0.71
TRAM1-201ENST00000262213 RRP36Q96EU6 259 aaKnown RBP19.51■□□□□ 0.71
TRAM1-201ENST00000262213 MLXIPQ9HAP2 919 aa19.51■□□□□ 0.71
TRAM1-201ENST00000262213 SLAIN2Q9P270 581 aa19.51■□□□□ 0.71
TRAM1-201ENST00000262213 ZC3H4Q9UPT8 1303 aaKnown RBP19.51■□□□□ 0.71
TRAM1-201ENST00000262213 PPFIA4O75335 1185 aa19.5■□□□□ 0.71
TRAM1-201ENST00000262213 MAGEA9P43362 315 aa19.5■□□□□ 0.71
TRAM1-201ENST00000262213 EHBP1Q8NDI1 1231 aa19.5■□□□□ 0.71
TRAM1-201ENST00000262213 CNOT6LQ96LI5 555 aaKnown RBP19.5■□□□□ 0.71
TRAM1-201ENST00000262213 THAP9Q9H5L6 903 aa19.5■□□□□ 0.71
TRAM1-201ENST00000262213 EHD2Q9NZN4 543 aa19.5■□□□□ 0.71
TRAM1-201ENST00000262213 CICQ96RK0 1608 aaPredicted RBP19.5■□□□□ 0.71
TRAM1-201ENST00000262213 GOLGA6BA6NDN3 693 aa19.5■□□□□ 0.71
TRAM1-201ENST00000262213 AGPSO00116 658 aa19.5■□□□□ 0.71
TRAM1-201ENST00000262213 KIF5AQ12840 1032 aa19.5■□□□□ 0.71
TRAM1-201ENST00000262213 TYW1BQ6NUM6 668 aa19.5■□□□□ 0.71
TRAM1-201ENST00000262213 TTI2Q6NXR4 508 aa19.5■□□□□ 0.71
TRAM1-201ENST00000262213 SECISBP2LQ93073 1101 aaKnown RBP19.5■□□□□ 0.71
TRAM1-201ENST00000262213 DUSP9Q99956 384 aaKnown RBP19.5■□□□□ 0.71
TRAM1-201ENST00000262213 NOC4LQ9BVI4 516 aaKnown RBP19.5■□□□□ 0.71
TRAM1-201ENST00000262213 BRIP1Q9BX63 1249 aa19.5■□□□□ 0.71
TRAM1-201ENST00000262213 GOLGA6CA6NDK9 693 aa19.49■□□□□ 0.71
TRAM1-201ENST00000262213 GOLGA6DP0CG33 693 aa19.49■□□□□ 0.71
TRAM1-201ENST00000262213 SRGNP10124 158 aa19.49■□□□□ 0.71
TRAM1-201ENST00000262213 PDE4DQ08499 809 aa19.49■□□□□ 0.71
TRAM1-201ENST00000262213 ARL6IP4Q66PJ3 421 aaKnown RBP19.49■□□□□ 0.71
TRAM1-201ENST00000262213 ANKRD40Q6AI12 368 aa19.49■□□□□ 0.71
TRAM1-201ENST00000262213 FAM76AQ8TAV0 307 aa19.49■□□□□ 0.71
TRAM1-201ENST00000262213 CCDC42Q96M95 316 aa19.49■□□□□ 0.71
TRAM1-201ENST00000262213 KAT14Q9H8E8 782 aa19.49■□□□□ 0.71
TRAM1-201ENST00000262213 GOLGA6AQ9NYA3 693 aa19.49■□□□□ 0.71
TRAM1-201ENST00000262213 COL1A1P02452 1464 aaPredicted RBP19.49■□□□□ 0.71
TRAM1-201ENST00000262213 FCER1AP12319 257 aa19.49■□□□□ 0.71
TRAM1-201ENST00000262213 LRRC1Q9BTT6 524 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms