RNA–Protein interactions for RNA: ENST00000238961.8

SLF2-201, Transcript of SMC5-SMC6 complex localization factor 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLF2, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF2-201ENST00000238961 INPP5FQ9Y2H2 1132 aa11.23□□□□□ -0.61
SLF2-201ENST00000238961 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.23□□□□□ -0.61
SLF2-201ENST00000238961 GFAPP14136 432 aa11.23□□□□□ -0.61
SLF2-201ENST00000238961 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.23□□□□□ -0.613e-7■□□□□ 9.5
SLF2-201ENST00000238961 DACT1Q9NYF0 836 aa11.23□□□□□ -0.61
SLF2-201ENST00000238961 PTPRCP08575 1304 aa11.23□□□□□ -0.61
SLF2-201ENST00000238961 ERBINQ96RT1 1412 aa11.23□□□□□ -0.61
SLF2-201ENST00000238961 LIG3P49916 1009 aa11.23□□□□□ -0.61
SLF2-201ENST00000238961 IFNL2Q8IZJ0 200 aa11.23□□□□□ -0.61
SLF2-201ENST00000238961 STK32BQ9NY57 414 aa11.23□□□□□ -0.61
SLF2-201ENST00000238961 PRKCQQ04759 706 aa11.22□□□□□ -0.61
SLF2-201ENST00000238961 PAK2Q13177 524 aa11.22□□□□□ -0.61
SLF2-201ENST00000238961 ZSCAN23Q3MJ62 389 aa11.22□□□□□ -0.61
SLF2-201ENST00000238961 TRIM67Q6ZTA4 783 aa11.22□□□□□ -0.61
SLF2-201ENST00000238961 C16orf62Q7Z3J2 963 aa11.22□□□□□ -0.61
SLF2-201ENST00000238961 GRK7Q8WTQ7 553 aa11.22□□□□□ -0.61
SLF2-201ENST00000238961 ARHGAP6O43182 974 aa11.22□□□□□ -0.61
SLF2-201ENST00000238961 THAP12O43422 761 aa11.22□□□□□ -0.61
SLF2-201ENST00000238961 CREB3O43889 395 aa11.22□□□□□ -0.61
SLF2-201ENST00000238961 CFBP00751 764 aa11.22□□□□□ -0.61
SLF2-201ENST00000238961 NFKBIAP25963 317 aa11.22□□□□□ -0.61
SLF2-201ENST00000238961 PMLP29590 882 aa11.22□□□□□ -0.61
SLF2-201ENST00000238961 LONRF3Q496Y0 759 aa11.22□□□□□ -0.61
SLF2-201ENST00000238961 MCMDC2Q4G0Z9 681 aa11.22□□□□□ -0.61
SLF2-201ENST00000238961 ARHGEF16Q5VV41 709 aa11.22□□□□□ -0.61
SLF2-201ENST00000238961 LARGE2Q8N3Y3 721 aa11.22□□□□□ -0.61
SLF2-201ENST00000238961 NAF1Q96HR8 494 aaKnown RBP11.22□□□□□ -0.61
SLF2-201ENST00000238961 DISC1Q9NRI5 854 aa11.22□□□□□ -0.61
SLF2-201ENST00000238961 PBRM1Q86U86 1689 aa11.22□□□□□ -0.61
SLF2-201ENST00000238961 FOXO3O43524 673 aa11.22□□□□□ -0.61
SLF2-201ENST00000238961 FLOT1O75955 427 aa11.22□□□□□ -0.61
SLF2-201ENST00000238961 SLC9A1P19634 815 aa11.22□□□□□ -0.61
SLF2-201ENST00000238961 LIG4P49917 911 aa11.22□□□□□ -0.61
SLF2-201ENST00000238961 YWHAGP61981 247 aaKnown RBP eCLIP11.22□□□□□ -0.61
SLF2-201ENST00000238961 ART3Q13508 389 aa11.22□□□□□ -0.61
SLF2-201ENST00000238961 E4F1Q66K89 784 aaPredicted RBP11.22□□□□□ -0.61
SLF2-201ENST00000238961 NUP58Q9BVL2 599 aa11.22□□□□□ -0.61
SLF2-201ENST00000238961 ELP1O95163 1332 aa11.22□□□□□ -0.61
SLF2-201ENST00000238961 FRMD3A2A2Y4 597 aa11.22□□□□□ -0.61
SLF2-201ENST00000238961 PRR23D1E9PI22 279 aaPredicted RBP11.22□□□□□ -0.61
SLF2-201ENST00000238961 PRR23D2P0DMB1 279 aaPredicted RBP11.22□□□□□ -0.61
SLF2-201ENST00000238961 HERC4Q5GLZ8 1057 aaPredicted RBP11.22□□□□□ -0.61
SLF2-201ENST00000238961 CSGALNACT2Q8N6G5 542 aa11.22□□□□□ -0.61
SLF2-201ENST00000238961 ANP32DO95626 131 aa11.22□□□□□ -0.61
SLF2-201ENST00000238961 IGSF22Q8N9C0 903 aa11.22□□□□□ -0.61
SLF2-201ENST00000238961 GDAP1L1Q96MZ0 367 aa11.22□□□□□ -0.61
SLF2-201ENST00000238961 KIFC3Q9BVG8 833 aa11.22□□□□□ -0.61
SLF2-201ENST00000238961 A6NNZ2 444 aa11.21□□□□□ -0.61
SLF2-201ENST00000238961 KLHL30Q0D2K2 578 aa11.21□□□□□ -0.61
SLF2-201ENST00000238961 TUBB8Q3ZCM7 444 aa11.21□□□□□ -0.61
SLF2-201ENST00000238961 TTC19Q6DKK2 380 aaPredicted RBP11.21□□□□□ -0.61
SLF2-201ENST00000238961 NELFCDQ8IXH7 590 aa11.21□□□□□ -0.61
SLF2-201ENST00000238961 NDUFAF2Q8N183 169 aa11.21□□□□□ -0.61
SLF2-201ENST00000238961 SLC52A1Q9NWF4 448 aa11.21□□□□□ -0.61
SLF2-201ENST00000238961 KIF17Q9P2E2 1029 aa11.21□□□□□ -0.61
SLF2-201ENST00000238961 IQANK1A0A1B0GTG1 560 aa11.21□□□□□ -0.61
SLF2-201ENST00000238961 HMGB3O15347 200 aaKnown RBP11.21□□□□□ -0.61
SLF2-201ENST00000238961 MRPL28Q13084 256 aaKnown RBP11.21□□□□□ -0.61
SLF2-201ENST00000238961 AP1ARQ63HQ0 302 aa11.21□□□□□ -0.61
SLF2-201ENST00000238961 TMTC3Q6ZXV5 915 aa11.21□□□□□ -0.61
SLF2-201ENST00000238961 TRIM42Q8IWZ5 723 aa11.21□□□□□ -0.61
SLF2-201ENST00000238961 DNAAF3Q8N9W5 541 aa11.21□□□□□ -0.61
SLF2-201ENST00000238961 LRRC8CQ8TDW0 803 aa11.21□□□□□ -0.61
SLF2-201ENST00000238961 BACH2Q9BYV9 841 aa11.21□□□□□ -0.61
SLF2-201ENST00000238961 TESPA1A2RU30 521 aaPredicted RBP11.21□□□□□ -0.61
SLF2-201ENST00000238961 LRRD1A4D1F6 860 aa11.21□□□□□ -0.61
SLF2-201ENST00000238961 M0R2C6 588 aa11.21□□□□□ -0.61
SLF2-201ENST00000238961 E2F6O75461 281 aa11.21□□□□□ -0.61
SLF2-201ENST00000238961 GSNP06396 782 aa11.21□□□□□ -0.61
SLF2-201ENST00000238961 SLC8A1P32418 973 aa11.21□□□□□ -0.61
SLF2-201ENST00000238961 RCSD1Q6JBY9 416 aa11.21□□□□□ -0.61
SLF2-201ENST00000238961 FRA10AC1Q70Z53 315 aa11.21□□□□□ -0.61
SLF2-201ENST00000238961 EXT2Q93063 718 aa11.21□□□□□ -0.61
SLF2-201ENST00000238961 SELENONQ9NZV5 590 aa11.21□□□□□ -0.61
SLF2-201ENST00000238961 ZRANB1Q9UGI0 708 aa11.21□□□□□ -0.61
SLF2-201ENST00000238961 INHBAP08476 426 aa11.21□□□□□ -0.61
SLF2-201ENST00000238961 ATP1A2P50993 1020 aa11.21□□□□□ -0.61
SLF2-201ENST00000238961 DYMQ7RTS9 669 aa11.21□□□□□ -0.61
SLF2-201ENST00000238961 TMTC1Q8IUR5 882 aa11.21□□□□□ -0.61
SLF2-201ENST00000238961 POLKQ9UBT6 870 aa11.21□□□□□ -0.61
SLF2-201ENST00000238961 TPH2Q8IWU9 490 aa11.21□□□□□ -0.62
SLF2-201ENST00000238961 CCNYQ8ND76 341 aa11.21□□□□□ -0.62
SLF2-201ENST00000238961 NUDT16Q96DE0 195 aaKnown RBP11.21□□□□□ -0.62
SLF2-201ENST00000238961 SUGCTQ9HAC7 445 aa11.21□□□□□ -0.62
SLF2-201ENST00000238961 ABCB4P21439 1286 aa11.21□□□□□ -0.62
SLF2-201ENST00000238961 TMPOP42166 694 aaKnown RBP11.21□□□□□ -0.62
SLF2-201ENST00000238961 NSUN2Q08J23 767 aaKnown RBP eCLIP11.21□□□□□ -0.62
SLF2-201ENST00000238961 INAQ16352 499 aa11.21□□□□□ -0.62
SLF2-201ENST00000238961 PPP6R3Q5H9R7 873 aaPredicted RBP11.21□□□□□ -0.62
SLF2-201ENST00000238961 MAP7D3Q8IWC1 876 aa11.21□□□□□ -0.62
SLF2-201ENST00000238961 ANKRD2Q9GZV1 360 aa11.21□□□□□ -0.62
SLF2-201ENST00000238961 MIS12Q9H081 205 aa11.21□□□□□ -0.62
SLF2-201ENST00000238961 AMFRQ9UKV5 643 aa11.21□□□□□ -0.62
SLF2-201ENST00000238961 H7C1D1 291 aa11.2□□□□□ -0.62
SLF2-201ENST00000238961 TMCC1O94876 653 aa11.2□□□□□ -0.62
SLF2-201ENST00000238961 CHEK2O96017 543 aa11.2□□□□□ -0.62
SLF2-201ENST00000238961 F13A1P00488 732 aa11.2□□□□□ -0.62
SLF2-201ENST00000238961 TMOD1P28289 359 aa11.2□□□□□ -0.62
SLF2-201ENST00000238961 CFAP221Q4G0U5 840 aa11.2□□□□□ -0.62
SLF2-201ENST00000238961 RRM2BQ7LG56 351 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms