RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 GNGT2O14610 69 aa12.14□□□□□ -0.47
MSH6-201ENST00000234420 SEC31AO94979 1220 aaKnown RBP12.14□□□□□ -0.47
MSH6-201ENST00000234420 KRT75O95678 551 aa12.14□□□□□ -0.47
MSH6-201ENST00000234420 SIX5Q8N196 739 aa12.14□□□□□ -0.47
MSH6-201ENST00000234420 CYTH2Q99418 400 aa12.14□□□□□ -0.47
MSH6-201ENST00000234420 BICC1Q9H694 974 aaKnown RBP12.14□□□□□ -0.47
MSH6-201ENST00000234420 ZSCAN20P17040 1043 aaPredicted RBP12.13□□□□□ -0.47
MSH6-201ENST00000234420 OSBPP22059 807 aa12.13□□□□□ -0.47
MSH6-201ENST00000234420 MTX1Q13505 466 aa12.13□□□□□ -0.47
MSH6-201ENST00000234420 ASIC2Q16515 512 aa12.13□□□□□ -0.47
MSH6-201ENST00000234420 SLC9C1Q4G0N8 1177 aa12.13□□□□□ -0.47
MSH6-201ENST00000234420 HNRNPH2P55795 449 aaKnown RBP12.13□□□□□ -0.47
MSH6-201ENST00000234420 ANAPC5Q9UJX4 755 aa12.13□□□□□ -0.47
MSH6-201ENST00000234420 FIS1Q9Y3D6 152 aa12.13□□□□□ -0.47
MSH6-201ENST00000234420 RAD17O75943 681 aa12.13□□□□□ -0.47
MSH6-201ENST00000234420 SLC1A4P43007 532 aa12.13□□□□□ -0.47
MSH6-201ENST00000234420 TRAF1Q13077 416 aa12.13□□□□□ -0.47
MSH6-201ENST00000234420 CBX8Q9HC52 389 aa12.13□□□□□ -0.47
MSH6-201ENST00000234420 USP40Q9NVE5 1235 aa12.13□□□□□ -0.47
MSH6-201ENST00000234420 HMG20BQ9P0W2 317 aa12.13□□□□□ -0.47
MSH6-201ENST00000234420 MIGA2Q7L4E1 593 aa12.13□□□□□ -0.47
MSH6-201ENST00000234420 ARMCX6Q7L4S7 300 aa12.13□□□□□ -0.47
MSH6-201ENST00000234420 ANKRD2Q9GZV1 360 aa12.13□□□□□ -0.47
MSH6-201ENST00000234420 HIBADHP31937 336 aaKnown RBP12.13□□□□□ -0.47
MSH6-201ENST00000234420 UBXN2AP68543 259 aa12.13□□□□□ -0.47
MSH6-201ENST00000234420 HIBCHQ6NVY1 386 aaPredicted RBP12.13□□□□□ -0.47
MSH6-201ENST00000234420 GTPBP10A4D1E9 387 aaKnown RBP12.13□□□□□ -0.47
MSH6-201ENST00000234420 FLOT1O75955 427 aa12.13□□□□□ -0.47
MSH6-201ENST00000234420 BLVRAP53004 296 aa12.13□□□□□ -0.47
MSH6-201ENST00000234420 ARHGAP44Q17R89 818 aa12.13□□□□□ -0.47
MSH6-201ENST00000234420 ANGPTL8Q6UXH0 198 aa12.13□□□□□ -0.47
MSH6-201ENST00000234420 FASTKD5Q7L8L6 764 aaKnown RBP12.13□□□□□ -0.47
MSH6-201ENST00000234420 LRRC8CQ8TDW0 803 aa12.13□□□□□ -0.47
MSH6-201ENST00000234420 DISC1Q9NRI5 854 aa12.13□□□□□ -0.47
MSH6-201ENST00000234420 ORC6Q9Y5N6 252 aa12.13□□□□□ -0.47
MSH6-201ENST00000234420 KIF1CO43896 1103 aaKnown RBP12.12□□□□□ -0.47
MSH6-201ENST00000234420 OCA2Q04671 838 aa12.12□□□□□ -0.47
MSH6-201ENST00000234420 RPS6KA1Q15418 735 aa12.12□□□□□ -0.47
MSH6-201ENST00000234420 DYMQ7RTS9 669 aa12.12□□□□□ -0.47
MSH6-201ENST00000234420 PALM2Q8IXS6 379 aa12.12□□□□□ -0.47
MSH6-201ENST00000234420 DPF3Q92784 378 aa12.12□□□□□ -0.47
MSH6-201ENST00000234420 KRT12Q99456 494 aa12.12□□□□□ -0.47
MSH6-201ENST00000234420 EPS15L1Q9UBC2 864 aa12.12□□□□□ -0.47
MSH6-201ENST00000234420 SAR1BQ9Y6B6 198 aa12.12□□□□□ -0.47
MSH6-201ENST00000234420 ALDH1B1P30837 517 aa12.12□□□□□ -0.47
MSH6-201ENST00000234420 DYNC1I2Q13409 638 aaKnown RBP12.12□□□□□ -0.47
MSH6-201ENST00000234420 TRIM50Q86XT4 487 aa12.12□□□□□ -0.47
MSH6-201ENST00000234420 RAB17Q9H0T7 212 aa12.12□□□□□ -0.47
MSH6-201ENST00000234420 PAG1Q9NWQ8 432 aa12.12□□□□□ -0.47
MSH6-201ENST00000234420 RTEL1Q9NZ71 1219 aa12.12□□□□□ -0.47
MSH6-201ENST00000234420 CLCA2Q9UQC9 943 aa12.12□□□□□ -0.47
MSH6-201ENST00000234420 TRIM75PA6NK02 468 aa12.12□□□□□ -0.47
MSH6-201ENST00000234420 NEMP1O14524 444 aa12.12□□□□□ -0.47
MSH6-201ENST00000234420 UPP2O95045 317 aa12.12□□□□□ -0.47
MSH6-201ENST00000234420 CCDC15Q0P6D6 951 aa12.12□□□□□ -0.47
MSH6-201ENST00000234420 FAM167BQ9BTA0 163 aa12.12□□□□□ -0.47
MSH6-201ENST00000234420 TRAF5O00463 557 aa12.12□□□□□ -0.47
MSH6-201ENST00000234420 OSTNP61366 133 aa12.12□□□□□ -0.47
MSH6-201ENST00000234420 NLRX1Q86UT6 975 aa12.12□□□□□ -0.47
MSH6-201ENST00000234420 ELMOD1Q8N336 334 aa12.12□□□□□ -0.47
MSH6-201ENST00000234420 AS3MTQ9HBK9 375 aa12.12□□□□□ -0.47
MSH6-201ENST00000234420 LMNAP02545 664 aaKnown RBP12.12□□□□□ -0.47
MSH6-201ENST00000234420 SNX1Q13596 522 aa12.12□□□□□ -0.47
MSH6-201ENST00000234420 CC2D2AQ9P2K1 1620 aa12.12□□□□□ -0.47
MSH6-201ENST00000234420 PAWRQ96IZ0 340 aaKnown RBP12.12□□□□□ -0.47
MSH6-201ENST00000234420 E9PMD0 336 aa12.11□□□□□ -0.47
MSH6-201ENST00000234420 WASLO00401 505 aaPredicted RBP12.11□□□□□ -0.47
MSH6-201ENST00000234420 DPYSL4O14531 572 aa12.11□□□□□ -0.47
MSH6-201ENST00000234420 SDSP20132 328 aa12.11□□□□□ -0.47
MSH6-201ENST00000234420 PEX26Q7Z412 305 aa12.11□□□□□ -0.47
MSH6-201ENST00000234420 DNAJC7Q99615 494 aa12.11□□□□□ -0.47
MSH6-201ENST00000234420 RAD18Q9NS91 495 aa12.11□□□□□ -0.47
MSH6-201ENST00000234420 TRIM14Q14142 442 aa12.11□□□□□ -0.47
MSH6-201ENST00000234420 RSRC2Q7L4I2 434 aaKnown RBP12.11□□□□□ -0.47
MSH6-201ENST00000234420 SLC10A4Q96EP9 437 aa12.11□□□□□ -0.47
MSH6-201ENST00000234420 SRPK1Q96SB4 655 aaKnown RBP12.11□□□□□ -0.47
MSH6-201ENST00000234420 SEPT9Q9UHD8 586 aaPredicted RBP12.11□□□□□ -0.47
MSH6-201ENST00000234420 TRPC5Q9UL62 973 aaPredicted RBP12.11□□□□□ -0.47
MSH6-201ENST00000234420 SUPT6HQ7KZ85 1726 aaKnown RBP12.11□□□□□ -0.47
MSH6-201ENST00000234420 PLEKHH2Q8IVE3 1493 aa12.11□□□□□ -0.47
MSH6-201ENST00000234420 ARHGAP6O43182 974 aa12.11□□□□□ -0.47
MSH6-201ENST00000234420 MMS22LQ6ZRQ5 1243 aa12.11□□□□□ -0.47
MSH6-201ENST00000234420 DBNLQ9UJU6 430 aaKnown RBP12.11□□□□□ -0.47
MSH6-201ENST00000234420 DDIT3P35638 169 aa12.11□□□□□ -0.47
MSH6-201ENST00000234420 CCDC85BQ15834 202 aaPredicted RBP12.11□□□□□ -0.47
MSH6-201ENST00000234420 LONRF2Q1L5Z9 754 aa12.11□□□□□ -0.47
MSH6-201ENST00000234420 YAF2Q8IY57 180 aa12.11□□□□□ -0.47
MSH6-201ENST00000234420 DEPTORQ8TB45 409 aa12.11□□□□□ -0.47
MSH6-201ENST00000234420 P3H4Q92791 437 aa12.11□□□□□ -0.47
MSH6-201ENST00000234420 SNX21Q969T3 373 aa12.11□□□□□ -0.47
MSH6-201ENST00000234420 DAAM1Q9Y4D1 1078 aa12.11□□□□□ -0.47
MSH6-201ENST00000234420 C9orf84Q5VXU9 1444 aa12.11□□□□□ -0.47
MSH6-201ENST00000234420 EVI5O60447 810 aa12.11□□□□□ -0.47
MSH6-201ENST00000234420 MAGEA1P43355 309 aa12.11□□□□□ -0.47
MSH6-201ENST00000234420 TFCP2Q12800 502 aa12.11□□□□□ -0.47
MSH6-201ENST00000234420 TBCCQ15814 346 aa12.11□□□□□ -0.47
MSH6-201ENST00000234420 ENAHQ8N8S7 591 aaPredicted RBP12.11□□□□□ -0.47
MSH6-201ENST00000234420 DPH5Q9H2P9 285 aa12.11□□□□□ -0.47
MSH6-201ENST00000234420 IMPACTQ9P2X3 320 aa12.11□□□□□ -0.47
MSH6-201ENST00000234420 DOLKQ9UPQ8 538 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms