RNA–Protein interactions for RNA: ENSMUST00000225319.1

Ssr1-204, Transcript of Translocon-associated protein subunit alpha, mousemouse

BASIC

Gene Ssr1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-204ENSMUST00000225319 Grin2dQ03391 1323 aa16.2■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Ulk4Q3V129 1303 aa16.2■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Tbc1d2B1AVH7 922 aa16.2■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Zscan29E9Q5B4 869 aa16.2■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Cyp2c68K7N6C2 491 aa16.2■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Bin1O08539 588 aaKnown RBP16.2■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Grin1P35438 938 aa16.2■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Irf5P56477 497 aa16.2■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Bace1P56818 501 aa16.2■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Anks1aP59672 1150 aa16.2■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Nxf2Q4ZGD8 691 aa16.2■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Psen2Q61144 448 aa16.2■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Stxbp2Q64324 593 aa16.2■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Cep135Q6P5D4 1140 aa16.2■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Lrrd1Q8C0R9 853 aa16.2■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Vps53Q8CCB4 832 aa16.2■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Phf20l1Q8CCJ9 1013 aa16.2■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Onecut3Q8K557 490 aa16.2■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Apobec3Q99J72 440 aaKnown RBP16.2■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Armc3A2AU72 881 aa16.19■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Palm3A2TJV2 734 aa16.19■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Tmem132bF7BAB2 1078 aa16.19■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Tnni3kQ5GIG6 834 aa16.19■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Vmn1r209Q5NC97 312 aa16.19■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Prpf4bQ61136 1007 aaKnown RBP16.19■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Otud6bQ8K2H2 294 aa16.19■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Hs2st1Q8R3H7 356 aa16.19■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Tmem191cQ9JJB1 302 aa16.19■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Ifi202Q9R002 445 aa16.19■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Prkab1Q9R078 270 aa16.19■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Nek3Q9R0A5 511 aa16.19■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Kcnh3Q9WVJ0 1095 aa16.19■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Megf6Q80V70 1572 aa16.19■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Rasa2P58069 847 aa16.19■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Abcf1Q6P542 837 aaKnown RBP16.19■□□□□ 0.18
Ssr1-204ENSMUST00000225319 PigsQ6PD26 555 aaKnown RBP16.19■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Znf653Q6YND2 615 aa16.19■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Calhm4Q8CE93 315 aa16.19■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Shtn1Q8K2Q9 631 aa16.19■□□□□ 0.18
Ssr1-204ENSMUST00000225319 MyripQ8K3I4 856 aa16.19■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Nod2Q8K3Z0 1020 aa16.19■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Tnip1Q9WUU8 647 aa16.19■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Large1Q9Z1M7 756 aa16.19■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Dync1i1O88485 628 aa16.18■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Fgfr2P21803 821 aa16.18■□□□□ 0.18
Ssr1-204ENSMUST00000225319 OatP29758 439 aa16.18■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Gm11437Q5QR91 290 aa16.18■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Cnot7Q60809 285 aa16.18■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Ptger2Q62053 362 aa16.18■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Cnga2Q62398 664 aa16.18■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Hdac4Q6NZM9 1076 aa16.18■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Clec16aQ80U30 1036 aa16.18■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Csrnp2Q8BGQ2 534 aa16.18■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Depdc1aQ8CIG0 804 aa16.18■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Iqca1Q9CUL5 857 aa16.18■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Creld2Q9CYA0 350 aa16.18■□□□□ 0.18
Ssr1-204ENSMUST00000225319 SisF8VQM5 1818 aa16.18■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Copb2O55029 905 aa16.17■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Cdh15P33146 784 aa16.17■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Nedd1P33215 660 aa16.17■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Zfp953Q3UPV7 304 aa16.17■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Psg29Q3URN6 468 aa16.17■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Eme2Q56A04 373 aa16.17■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Kiaa0754Q69ZZ9 979 aa16.17■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Cep85Q8BMK0 761 aa16.17■□□□□ 0.18
Ssr1-204ENSMUST00000225319 MslnlQ8C160 685 aa16.17■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Znf428Q8C1M2 176 aa16.17■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Kctd10Q922M3 315 aa16.17■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Mtmr9Q9Z2D0 545 aa16.17■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Pappa2E9PZ87 1789 aa16.17■□□□□ 0.18
Ssr1-204ENSMUST00000225319 PatjQ63ZW7 1834 aa16.17■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Atp8b5A3FIN4 1183 aa16.16■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Jakmip2D3YXK0 820 aa16.16■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Slc7a1Q09143 622 aa16.16■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Gas2l3Q3UWW6 683 aa16.16■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Panx2Q6IMP4 677 aa16.16■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Cep120Q7TSG1 988 aa16.16■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Ccdc172Q810N9 267 aa16.16■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Larp6Q8BN59 492 aa16.16■□□□□ 0.18
Ssr1-204ENSMUST00000225319 C8aQ8K182 587 aa16.16■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Mrpl11Q9CQF0 192 aaKnown RBP16.16■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Galntl5Q9D4M9 431 aa16.16■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Acad12D3Z7X0 555 aa16.16■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Dcdc2bF7BCK0 340 aa16.16■□□□□ 0.18
Ssr1-204ENSMUST00000225319 LeprP48356 1162 aa16.16■□□□□ 0.18
Ssr1-204ENSMUST00000225319 C87499Q3UX49 493 aa16.16■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Usp13Q5BKP2 858 aa16.16■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Stxbp3Q60770 592 aa16.16■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Cdc37Q61081 379 aa16.16■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Ift122Q6NWV3 1182 aa16.16■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Ehd2Q8BH64 543 aa16.16■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Gga3Q8BMI3 718 aa16.16■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Dppa3Q8QZY3 150 aa16.16■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Oxnad1Q8VE38 311 aa16.16■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Ppp2r5dQ91V89 594 aa16.16■□□□□ 0.18
Ssr1-204ENSMUST00000225319 MbipQ99LQ1 341 aa16.16■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Tdrd1Q99MV1 1172 aa16.16■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Scrn1Q9CZC8 414 aa16.16■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Cul5Q9D5V5 780 aa16.16■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Tmod2Q9JKK7 351 aa16.16■□□□□ 0.18
Retrieved 100 of 22,080 RNA–protein pairs in 9.4 ms