RNA–Protein interactions for RNA: ENSMUST00000223160.1

Trim9-211, Transcript of E3 ubiquitin-protein ligase TRIM9, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Trim9, Length 3,574 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9-211ENSMUST00000223160 E2f4Q8R0K9 410 aa11.33□□□□□ -0.6
Trim9-211ENSMUST00000223160 Cfap45Q9D9U9 551 aa11.33□□□□□ -0.6
Trim9-211ENSMUST00000223160 Col20a1Q923P0 1320 aa11.33□□□□□ -0.6
Trim9-211ENSMUST00000223160 Lrp5Q91VN0 1614 aa11.32□□□□□ -0.6
Trim9-211ENSMUST00000223160 Kif13bA0A286YCV9 1847 aa11.32□□□□□ -0.6
Trim9-211ENSMUST00000223160 Man1a2P39098 641 aa11.32□□□□□ -0.6
Trim9-211ENSMUST00000223160 Pth1rP41593 591 aa11.32□□□□□ -0.6
Trim9-211ENSMUST00000223160 Stat3P42227 770 aaKnown RBP11.32□□□□□ -0.6
Trim9-211ENSMUST00000223160 Hps5P59438 1126 aa11.32□□□□□ -0.6
Trim9-211ENSMUST00000223160 Esyt2Q3TZZ7 845 aa11.32□□□□□ -0.6
Trim9-211ENSMUST00000223160 Sp4Q62445 782 aa11.32□□□□□ -0.6
Trim9-211ENSMUST00000223160 GlyctkQ8QZY2 523 aa11.32□□□□□ -0.6
Trim9-211ENSMUST00000223160 Exoc1Q8R3S6 894 aa11.32□□□□□ -0.6
Trim9-211ENSMUST00000223160 Pnpla6Q3TRM4 1355 aa11.32□□□□□ -0.6
Trim9-211ENSMUST00000223160 Usp34Q6ZQ93 3582 aa11.32□□□□□ -0.6
Trim9-211ENSMUST00000223160 Jakmip2D3YXK0 820 aa11.32□□□□□ -0.6
Trim9-211ENSMUST00000223160 Nck2O55033 380 aa11.32□□□□□ -0.6
Trim9-211ENSMUST00000223160 Plekha7Q3UIL6 1118 aaKnown RBP11.32□□□□□ -0.6
Trim9-211ENSMUST00000223160 Tnni3kQ5GIG6 834 aa11.32□□□□□ -0.6
Trim9-211ENSMUST00000223160 Meis1Q60954 390 aa11.32□□□□□ -0.6
Trim9-211ENSMUST00000223160 Hoxa13Q62424 386 aa11.32□□□□□ -0.6
Trim9-211ENSMUST00000223160 Hdac4Q6NZM9 1076 aa11.32□□□□□ -0.6
Trim9-211ENSMUST00000223160 Abcf1Q6P542 837 aaKnown RBP11.32□□□□□ -0.6
Trim9-211ENSMUST00000223160 Clca4aQ6Q473 924 aa11.32□□□□□ -0.6
Trim9-211ENSMUST00000223160 Ccdc122Q8BVN0 290 aa11.32□□□□□ -0.6
Trim9-211ENSMUST00000223160 Epc1Q8C9X6 813 aa11.32□□□□□ -0.6
Trim9-211ENSMUST00000223160 Q91WD4 421 aa11.32□□□□□ -0.6
Trim9-211ENSMUST00000223160 Eid1Q9DCR4 169 aa11.32□□□□□ -0.6
Trim9-211ENSMUST00000223160 Ssrp1Q08943 708 aaKnown RBP11.32□□□□□ -0.6
Trim9-211ENSMUST00000223160 Ccna1Q61456 421 aa11.32□□□□□ -0.6
Trim9-211ENSMUST00000223160 Anks1bQ8BIZ1 1259 aa11.32□□□□□ -0.6
Trim9-211ENSMUST00000223160 Tmem87aQ8BXN9 555 aa11.32□□□□□ -0.6
Trim9-211ENSMUST00000223160 Bcas3Q8CCN5 928 aa11.32□□□□□ -0.6
Trim9-211ENSMUST00000223160 Xrcc4Q924T3 326 aa11.32□□□□□ -0.6
Trim9-211ENSMUST00000223160 Mmtag2Q99LX5 260 aaKnown RBP11.32□□□□□ -0.6
Trim9-211ENSMUST00000223160 Eif2ak3Q9Z2B5 1114 aa11.32□□□□□ -0.6
Trim9-211ENSMUST00000223160 Vmn2r68L7N2B3 851 aa11.31□□□□□ -0.6
Trim9-211ENSMUST00000223160 Sycp1Q62209 993 aa11.31□□□□□ -0.6
Trim9-211ENSMUST00000223160 Cypt2Q6P924 180 aa11.31□□□□□ -0.6
Trim9-211ENSMUST00000223160 Atp1a1Q8VDN2 1023 aaKnown RBP11.31□□□□□ -0.6
Trim9-211ENSMUST00000223160 AdnpQ9Z103 1108 aaKnown RBP11.31□□□□□ -0.6
Trim9-211ENSMUST00000223160 Lama4P97927 1816 aa11.31□□□□□ -0.6
Trim9-211ENSMUST00000223160 Sept2P42208 361 aaKnown RBP11.31□□□□□ -0.6
Trim9-211ENSMUST00000223160 Tnnt2P50752 301 aa11.31□□□□□ -0.6
Trim9-211ENSMUST00000223160 Ankrd13cQ3UX43 541 aa11.31□□□□□ -0.6
Trim9-211ENSMUST00000223160 Adam6bQ6IMH7 756 aa11.31□□□□□ -0.6
Trim9-211ENSMUST00000223160 Ppp2r5bQ6PD28 497 aa11.31□□□□□ -0.6
Trim9-211ENSMUST00000223160 CtifQ6PEE2 600 aaKnown RBP11.31□□□□□ -0.6
Trim9-211ENSMUST00000223160 Pnpla2Q8BJ56 486 aa11.31□□□□□ -0.6
Trim9-211ENSMUST00000223160 Trmt2aQ8BNV1 574 aaKnown RBP11.31□□□□□ -0.6
Trim9-211ENSMUST00000223160 Cep95Q8BVV7 827 aa11.31□□□□□ -0.6
Trim9-211ENSMUST00000223160 Yipf1Q91VU1 306 aa11.31□□□□□ -0.6
Trim9-211ENSMUST00000223160 Tpcn1Q9EQJ0 817 aa11.31□□□□□ -0.6
Trim9-211ENSMUST00000223160 Cyp2ab1S4R196 498 aa11.31□□□□□ -0.6
Trim9-211ENSMUST00000223160 Duox1A2AQ92 1551 aa11.31□□□□□ -0.6
Trim9-211ENSMUST00000223160 PigsQ6PD26 555 aaKnown RBP11.31□□□□□ -0.6
Trim9-211ENSMUST00000223160 Fam161bQ8CB59 589 aa11.31□□□□□ -0.6
Trim9-211ENSMUST00000223160 Brd3Q8K2F0 726 aaKnown RBP11.31□□□□□ -0.6
Trim9-211ENSMUST00000223160 Mtmr4Q91XS1 1190 aa11.31□□□□□ -0.6
Trim9-211ENSMUST00000223160 Tgs1Q923W1 853 aa11.31□□□□□ -0.6
Trim9-211ENSMUST00000223160 Ankrd35E9Q9D8 996 aa11.3□□□□□ -0.6
Trim9-211ENSMUST00000223160 Parp1P11103 1013 aaKnown RBP11.3□□□□□ -0.6
Trim9-211ENSMUST00000223160 Nap1l1P28656 391 aaKnown RBP11.3□□□□□ -0.6
Trim9-211ENSMUST00000223160 Stim1P70302 685 aa11.3□□□□□ -0.6
Trim9-211ENSMUST00000223160 Mns1Q61884 491 aa11.3□□□□□ -0.6
Trim9-211ENSMUST00000223160 Ptrh1Q8BW00 204 aa11.3□□□□□ -0.6
Trim9-211ENSMUST00000223160 Ildr1Q8CBR1 537 aa11.3□□□□□ -0.6
Trim9-211ENSMUST00000223160 Ccdc43Q9CR29 222 aaKnown RBP11.3□□□□□ -0.6
Trim9-211ENSMUST00000223160 4930548H24RikQ9D496 437 aa11.3□□□□□ -0.6
Trim9-211ENSMUST00000223160 Ccdc105Q9D4K7 499 aa11.3□□□□□ -0.6
Trim9-211ENSMUST00000223160 Calml3Q9D6P8 149 aa11.3□□□□□ -0.6
Trim9-211ENSMUST00000223160 Copb1Q9JIF7 953 aa11.3□□□□□ -0.6
Trim9-211ENSMUST00000223160 Nek3Q9R0A5 511 aa11.3□□□□□ -0.6
Trim9-211ENSMUST00000223160 Tulp1Q9Z273 543 aa11.3□□□□□ -0.6
Trim9-211ENSMUST00000223160 Myh8P13542 1937 aa11.3□□□□□ -0.6
Trim9-211ENSMUST00000223160 Scn11aQ9R053 1765 aa11.3□□□□□ -0.6
Trim9-211ENSMUST00000223160 4932429P05RikA2ADI4 785 aa11.3□□□□□ -0.6
Trim9-211ENSMUST00000223160 Parp2O88554 559 aa11.3□□□□□ -0.6
Trim9-211ENSMUST00000223160 Prl2c2P04095 224 aa11.3□□□□□ -0.6
Trim9-211ENSMUST00000223160 Akr1b1P45376 316 aa11.3□□□□□ -0.6
Trim9-211ENSMUST00000223160 Spata18Q0P557 537 aa11.3□□□□□ -0.6
Trim9-211ENSMUST00000223160 Slc13a4Q8BZ82 625 aa11.3□□□□□ -0.6
Trim9-211ENSMUST00000223160 Brms1Q99N20 246 aa11.3□□□□□ -0.6
Trim9-211ENSMUST00000223160 BcamQ9R069 622 aa11.3□□□□□ -0.6
Trim9-211ENSMUST00000223160 Prkab1Q9R078 270 aa11.3□□□□□ -0.6
Trim9-211ENSMUST00000223160 Uchl5Q9WUP7 329 aa11.3□□□□□ -0.6
Trim9-211ENSMUST00000223160 Gcom1E9PZ54 550 aa11.29□□□□□ -0.6
Trim9-211ENSMUST00000223160 Traf1P39428 409 aa11.29□□□□□ -0.6
Trim9-211ENSMUST00000223160 Eps15P42567 897 aa11.29□□□□□ -0.6
Trim9-211ENSMUST00000223160 Capza3P70190 299 aa11.29□□□□□ -0.6
Trim9-211ENSMUST00000223160 Krt86P97861 486 aa11.29□□□□□ -0.6
Trim9-211ENSMUST00000223160 MyzapQ3UIJ9 466 aa11.29□□□□□ -0.6
Trim9-211ENSMUST00000223160 PsdQ5DTT2 1024 aa11.29□□□□□ -0.6
Trim9-211ENSMUST00000223160 Tm4sf1Q64302 202 aa11.29□□□□□ -0.6
Trim9-211ENSMUST00000223160 Scaf8Q6DID3 1268 aa11.29□□□□□ -0.6
Trim9-211ENSMUST00000223160 Maats1Q8BRC6 783 aa11.29□□□□□ -0.6
Trim9-211ENSMUST00000223160 Cdan1Q8CC12 1239 aa11.29□□□□□ -0.6
Trim9-211ENSMUST00000223160 Srgap2Q91Z67 1071 aa11.29□□□□□ -0.6
Trim9-211ENSMUST00000223160 Tmem191cQ9JJB1 302 aa11.29□□□□□ -0.6
Trim9-211ENSMUST00000223160 Phc3Q8CHP6 981 aa11.29□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 30.2 ms