RNA–Protein interactions for RNA: ENSMUST00000029480.8

Prpf38b-201, Transcript of Pre-mRNA-splicing factor 38B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prpf38b, Length 3,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38b-201ENSMUST00000029480 Mfap3lQ9D3X9 409 aa14.9□□□□□ -0.02
Prpf38b-201ENSMUST00000029480 Polr2dQ9D7M8 142 aaKnown RBP14.9□□□□□ -0.02
Prpf38b-201ENSMUST00000029480 Stk11Q9WTK7 436 aa14.9□□□□□ -0.02
Prpf38b-201ENSMUST00000029480 Myh8P13542 1937 aa14.9□□□□□ -0.02
Prpf38b-201ENSMUST00000029480 PnnO35691 725 aaKnown RBP14.9□□□□□ -0.02
Prpf38b-201ENSMUST00000029480 MarcksP26645 309 aaKnown RBP14.9□□□□□ -0.02
Prpf38b-201ENSMUST00000029480 Sdc2P43407 202 aa14.9□□□□□ -0.02
Prpf38b-201ENSMUST00000029480 Tango6Q8C3S2 1079 aa14.9□□□□□ -0.02
Prpf38b-201ENSMUST00000029480 Ppfibp1Q8C8U0 969 aaKnown RBP14.9□□□□□ -0.02
Prpf38b-201ENSMUST00000029480 Trpc5Q9QX29 975 aa14.9□□□□□ -0.02
Prpf38b-201ENSMUST00000029480 Prr16A3KMN5 304 aa14.89□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 LdhaP06151 332 aaKnown RBP14.89□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 Epb41l4aP52963 686 aa14.89□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 Best3Q6H1V1 669 aa14.89□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 Larp6Q8BN59 492 aa14.89□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 Eif2b5Q8CHW4 717 aa14.89□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 Epb41l3Q9WV92 929 aa14.89□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 Frmpd3A0A140LIW3 1774 aa14.89□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 Ano3A2AHL1 981 aa14.89□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 Bpifb4A2BGH0 617 aa14.89□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 Cyp4x1Q6A152 507 aa14.89□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 HlfQ8BW74 295 aa14.89□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 TicrrQ8BQ33 1889 aa14.89□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 Hnrnph3D3Z3N4 346 aaKnown RBP14.88□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 Fam186bD3Z420 943 aa14.88□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 Rsph10bE9PYQ0 876 aa14.88□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 Ppp1r21Q3TDD9 780 aa14.88□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 Map9Q3TRR0 646 aa14.88□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 Hirip3Q8BLH7 601 aa14.88□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 Rbm5Q91YE7 815 aaKnown RBP14.88□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 LpxnQ99N69 386 aa14.88□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 Paip2Q9D6V8 124 aa14.88□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 Cmtr1Q9DBC3 837 aa14.88□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 Dnajc7Q9QYI3 494 aa14.88□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 Dnm2P39054 870 aaKnown RBP14.88□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 AsnsQ61024 561 aa14.88□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 Fam161bQ8CB59 589 aa14.88□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 Ushbp1Q8R370 680 aa14.88□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 Trmt44Q9D2Q2 713 aa14.88□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 Popdc2Q9ES82 367 aa14.88□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 GsdmeQ9Z2D3 512 aa14.88□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 Gm43738A0A0G2JEA5 862 aa14.87□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 Sox5P35710 763 aa14.87□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 Pstpip1P97814 415 aa14.87□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 Esyt3Q5DTI8 891 aa14.87□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 Cfap69Q8BH53 942 aa14.87□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 DlatQ8BMF4 642 aa14.87□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 Igsf9bE9PZ19 1328 aa14.87□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 Nr1i3O35627 358 aa14.87□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 IntuQ059U7 942 aa14.87□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 Tmtc1Q3UV71 942 aa14.87□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 Rhpn1Q61085 643 aa14.87□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 Znf532Q6NXK2 1036 aa14.87□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 Tacc1Q6Y685 774 aa14.87□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 Eps8l1Q8R5F8 716 aa14.87□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 1700018B08RikQ9DA83 213 aa14.87□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 Cfap70D3YVL2 1141 aa14.87□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 Scgb2b19J3QM75 112 aa14.87□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 Nr1i2O54915 431 aa14.87□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 Celf1P28659 486 aaKnown RBP14.87□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 Senp1P59110 640 aa14.87□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 Cct6bQ61390 531 aa14.87□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 Smarca1Q6PGB8 1046 aa14.87□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 WaslQ91YD9 501 aa14.87□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 CpvlQ9D3S9 478 aa14.87□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 Psmd10Q9Z2X2 231 aa14.87□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 Zswim8Q3UHH1 1832 aaKnown RBP14.86□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 Ccdc85cE9Q6B2 420 aa14.86□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 Pak1O88643 545 aa14.86□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 Ranbp1P34022 203 aaKnown RBP14.86□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 Gja5Q01231 358 aa14.86□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 Fhdc1Q3ULZ2 1149 aa14.86□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 Camsap3Q80VC9 1252 aa14.86□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 Arl8aQ8VEH3 186 aa14.86□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 Q91WD4 421 aa14.86□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 Ubxn8Q9QZ49 277 aa14.86□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 Angptl3Q9R182 455 aa14.86□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 Gpaa1Q9WTK3 621 aa14.86□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 Cdc27A2A6Q5 825 aa14.86□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 Pus7B7ZNL8 666 aaKnown RBP14.86□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 Diaph1O08808 1255 aa14.86□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 Stim1P70302 685 aa14.86□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 Ddx49Q4FZF3 480 aaKnown RBP14.86□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 Pnma5Q5DTT8 618 aa14.86□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 CtcfQ61164 736 aaKnown RBP14.86□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 Pram1Q6BCL1 675 aa14.86□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 GypcQ78HU7 95 aa14.86□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 Psmd2Q8VDM4 908 aa14.86□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 TbcbQ9D1E6 244 aa14.86□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 Calr3Q9D9Q6 380 aa14.86□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 Cnbd1B1AWM0 430 aa14.85□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 Zfp213E9QAW0 468 aa14.85□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 SarsP26638 512 aaKnown RBP14.85□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 Spata5Q3UMC0 893 aaKnown RBP14.85□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 Znf652Q5DU09 608 aa14.85□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 Q8C5C9 218 aa14.85□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 SltmQ8CH25 1031 aaKnown RBP14.85□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 Vps18Q8R307 973 aa14.85□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 Pspc1Q8R326 523 aaKnown RBP14.85□□□□□ -0.03
Prpf38b-201ENSMUST00000029480 Mmtag2Q99LX5 260 aaKnown RBP14.85□□□□□ -0.03
Retrieved 100 of 22,080 RNA–protein pairs in 13 ms