RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Ano2Q8CFW1 1002 aa18.83■□□□□ 0.61
Ctcf-201ENSMUST00000005841 Slc12a6Q924N4 1150 aa18.83■□□□□ 0.61
Ctcf-201ENSMUST00000005841 Fam50bQ9WTJ8 334 aa18.83■□□□□ 0.61
Ctcf-201ENSMUST00000005841 Gfpt1P47856 697 aa18.83■□□□□ 0.6
Ctcf-201ENSMUST00000005841 Ccdc186Q8C9S4 917 aa18.83■□□□□ 0.6
Ctcf-201ENSMUST00000005841 Cmtr1Q9DBC3 837 aa18.83■□□□□ 0.6
Ctcf-201ENSMUST00000005841 Kcna6Q61923 529 aa18.83■□□□□ 0.6
Ctcf-201ENSMUST00000005841 Znf326O88291 580 aa18.82■□□□□ 0.6
Ctcf-201ENSMUST00000005841 Shox2P70390 331 aa18.82■□□□□ 0.6
Ctcf-201ENSMUST00000005841 Eif3bQ8JZQ9 803 aaKnown RBP18.82■□□□□ 0.6
Ctcf-201ENSMUST00000005841 Tpm3-rs7D3Z2H9 248 aa18.82■□□□□ 0.6
Ctcf-201ENSMUST00000005841 Kif1bpQ6ZPU9 617 aa18.82■□□□□ 0.6
Ctcf-201ENSMUST00000005841 4930572O03RikQ8C5Y0 211 aa18.82■□□□□ 0.6
Ctcf-201ENSMUST00000005841 Aco1P28271 889 aaKnown RBP18.82■□□□□ 0.6
Ctcf-201ENSMUST00000005841 RxrbP28704 520 aa18.82■□□□□ 0.6
Ctcf-201ENSMUST00000005841 Bbof1Q3V079 533 aa18.82■□□□□ 0.6
Ctcf-201ENSMUST00000005841 Ccdc157Q5SPX1 718 aa18.82■□□□□ 0.6
Ctcf-201ENSMUST00000005841 Otop3Q80UF9 577 aa18.82■□□□□ 0.6
Ctcf-201ENSMUST00000005841 Ttc19Q8CC21 365 aa18.82■□□□□ 0.6
Ctcf-201ENSMUST00000005841 Ppp1r3gQ9CW07 347 aa18.82■□□□□ 0.6
Ctcf-201ENSMUST00000005841 Lrrc57Q9D1G5 239 aa18.82■□□□□ 0.6
Ctcf-201ENSMUST00000005841 Gucy1a2F8VQK3 730 aa18.81■□□□□ 0.6
Ctcf-201ENSMUST00000005841 PcQ05920 1178 aa18.81■□□□□ 0.6
Ctcf-201ENSMUST00000005841 Skap2Q3UND0 358 aa18.81■□□□□ 0.6
Ctcf-201ENSMUST00000005841 Ddx49Q4FZF3 480 aaKnown RBP18.81■□□□□ 0.6
Ctcf-201ENSMUST00000005841 Gm12185Q5NCB2 835 aa18.81■□□□□ 0.6
Ctcf-201ENSMUST00000005841 Vcpip1Q8CDG3 1220 aa18.81■□□□□ 0.6
Ctcf-201ENSMUST00000005841 Foxo4Q9WVH3 505 aa18.81■□□□□ 0.6
Ctcf-201ENSMUST00000005841 4931408C20RikE9PWP9 1381 aa18.81■□□□□ 0.6
Ctcf-201ENSMUST00000005841 Hsd17b1P51656 344 aa18.81■□□□□ 0.6
Ctcf-201ENSMUST00000005841 Spata5Q3UMC0 893 aaKnown RBP18.81■□□□□ 0.6
Ctcf-201ENSMUST00000005841 Maip1Q8BHE8 291 aa18.81■□□□□ 0.6
Ctcf-201ENSMUST00000005841 Tmem60Q8K174 133 aa18.81■□□□□ 0.6
Ctcf-201ENSMUST00000005841 Nod2Q8K3Z0 1020 aa18.81■□□□□ 0.6
Ctcf-201ENSMUST00000005841 Plbd2Q3TCN2 594 aa18.81■□□□□ 0.6
Ctcf-201ENSMUST00000005841 Trim43aQ3TL54 445 aa18.81■□□□□ 0.6
Ctcf-201ENSMUST00000005841 Ddx47Q9CWX9 455 aaKnown RBP18.81■□□□□ 0.6
Ctcf-201ENSMUST00000005841 Nhsl1Q8CAF4 1587 aa18.81■□□□□ 0.6
Ctcf-201ENSMUST00000005841 TicrrQ8BQ33 1889 aa18.8■□□□□ 0.6
Ctcf-201ENSMUST00000005841 Nol4P60954 483 aa18.8■□□□□ 0.6
Ctcf-201ENSMUST00000005841 Mybpc2Q5XKE0 1136 aa18.8■□□□□ 0.6
Ctcf-201ENSMUST00000005841 Znf280dQ68FE8 974 aa18.8■□□□□ 0.6
Ctcf-201ENSMUST00000005841 Slc5a1Q8C3K6 665 aa18.8■□□□□ 0.6
Ctcf-201ENSMUST00000005841 Speer4aF8VPX6 267 aa18.8■□□□□ 0.6
Ctcf-201ENSMUST00000005841 Pla2g4fQ50L41 855 aa18.8■□□□□ 0.6
Ctcf-201ENSMUST00000005841 Ppm1eQ80TL0 749 aa18.8■□□□□ 0.6
Ctcf-201ENSMUST00000005841 FliiQ9JJ28 1271 aa18.8■□□□□ 0.6
Ctcf-201ENSMUST00000005841 Zfp853A0A1D5RM95 733 aa18.8■□□□□ 0.6
Ctcf-201ENSMUST00000005841 Fkbp1aP26883 108 aaKnown RBP18.8■□□□□ 0.6
Ctcf-201ENSMUST00000005841 Slc9a2Q3ZAS0 814 aa18.8■□□□□ 0.6
Ctcf-201ENSMUST00000005841 Fam170aQ66LM6 333 aa18.8■□□□□ 0.6
Ctcf-201ENSMUST00000005841 F13a1Q8BH61 732 aa18.8■□□□□ 0.6
Ctcf-201ENSMUST00000005841 Pcdhb3Q91XZ7 784 aa18.8■□□□□ 0.6
Ctcf-201ENSMUST00000005841 PigoQ9JJI6 1093 aa18.8■□□□□ 0.6
Ctcf-201ENSMUST00000005841 GgcxQ9QYC7 757 aa18.8■□□□□ 0.6
Ctcf-201ENSMUST00000005841 Flt1P35969 1333 aa18.79■□□□□ 0.6
Ctcf-201ENSMUST00000005841 Parp1P11103 1013 aaKnown RBP18.79■□□□□ 0.6
Ctcf-201ENSMUST00000005841 Ttc22Q8C159 568 aa18.79■□□□□ 0.6
Ctcf-201ENSMUST00000005841 MlphQ91V27 590 aa18.79■□□□□ 0.6
Ctcf-201ENSMUST00000005841 LpxnQ99N69 386 aa18.79■□□□□ 0.6
Ctcf-201ENSMUST00000005841 Gm4340L7N2C4 268 aa18.79■□□□□ 0.6
Ctcf-201ENSMUST00000005841 NapbP28663 298 aa18.79■□□□□ 0.6
Ctcf-201ENSMUST00000005841 Hirip3Q8BLH7 601 aa18.79■□□□□ 0.6
Ctcf-201ENSMUST00000005841 Pik3ap1Q9EQ32 811 aa18.79■□□□□ 0.6
Ctcf-201ENSMUST00000005841 Igflr1Q3U4N7 345 aa18.79■□□□□ 0.6
Ctcf-201ENSMUST00000005841 Ttc13A0A1L1SSC7 844 aa18.78■□□□□ 0.6
Ctcf-201ENSMUST00000005841 A0A1Y7VML8 143 aa18.78■□□□□ 0.6
Ctcf-201ENSMUST00000005841 Speer4f2E9Q366 295 aa18.78■□□□□ 0.6
Ctcf-201ENSMUST00000005841 Gm10378F6XQQ1 160 aa18.78■□□□□ 0.6
Ctcf-201ENSMUST00000005841 Abcd1P48410 736 aa18.78■□□□□ 0.6
Ctcf-201ENSMUST00000005841 Pls1Q3V0K9 630 aa18.78■□□□□ 0.6
Ctcf-201ENSMUST00000005841 Spag7Q7TNE3 227 aaKnown RBP18.78■□□□□ 0.6
Ctcf-201ENSMUST00000005841 Dnm1lQ8K1M6 742 aa18.78■□□□□ 0.6
Ctcf-201ENSMUST00000005841 Exoc4O35382 975 aa18.78■□□□□ 0.6
Ctcf-201ENSMUST00000005841 Klc1O88447 541 aa18.78■□□□□ 0.6
Ctcf-201ENSMUST00000005841 Prl2c3P04768 224 aa18.78■□□□□ 0.6
Ctcf-201ENSMUST00000005841 Hspa9P38647 679 aaKnown RBP18.78■□□□□ 0.6
Ctcf-201ENSMUST00000005841 Gnat2P50149 354 aa18.78■□□□□ 0.6
Ctcf-201ENSMUST00000005841 Clul1Q3ZRW6 464 aa18.78■□□□□ 0.6
Ctcf-201ENSMUST00000005841 Snip1Q8BIZ6 383 aaKnown RBP18.78■□□□□ 0.6
Ctcf-201ENSMUST00000005841 Pus7lQ8CE46 702 aa18.78■□□□□ 0.6
Ctcf-201ENSMUST00000005841 Efcc1Q9JJF6 558 aa18.78■□□□□ 0.6
Ctcf-201ENSMUST00000005841 Becn2P0DM65 447 aa18.78■□□□□ 0.6
Ctcf-201ENSMUST00000005841 Psg29Q3URN6 468 aa18.78■□□□□ 0.6
Ctcf-201ENSMUST00000005841 Ube2sQ921J4 223 aa18.78■□□□□ 0.6
Ctcf-201ENSMUST00000005841 SufuQ9Z0P7 484 aa18.78■□□□□ 0.6
Ctcf-201ENSMUST00000005841 Magea10A2AMW4 325 aa18.77■□□□□ 0.6
Ctcf-201ENSMUST00000005841 MycnP03966 462 aaKnown RBP18.77■□□□□ 0.6
Ctcf-201ENSMUST00000005841 Atp6v1aP50516 617 aaKnown RBP18.77■□□□□ 0.6
Ctcf-201ENSMUST00000005841 Zranb3Q6NZP1 1069 aa18.77■□□□□ 0.6
Ctcf-201ENSMUST00000005841 Lrrc15Q80X72 579 aa18.77■□□□□ 0.6
Ctcf-201ENSMUST00000005841 GphnQ8BUV3 769 aaKnown RBP18.77■□□□□ 0.6
Ctcf-201ENSMUST00000005841 Gm4985A2ALC6 410 aa18.77■□□□□ 0.6
Ctcf-201ENSMUST00000005841 Gm5934D3Z4U6 212 aa18.77■□□□□ 0.6
Ctcf-201ENSMUST00000005841 Parp10Q8CIE4 960 aa18.77■□□□□ 0.6
Ctcf-201ENSMUST00000005841 Prpf4Q9DAW6 521 aaKnown RBP18.77■□□□□ 0.6
Ctcf-201ENSMUST00000005841 Palm3A2TJV2 734 aa18.77■□□□□ 0.59
Ctcf-201ENSMUST00000005841 Sik1Q60670 779 aa18.77■□□□□ 0.59
Ctcf-201ENSMUST00000005841 Grin3bQ91ZU9 1003 aa18.77■□□□□ 0.59
Ctcf-201ENSMUST00000005841 Alpk1Q9CXB8 1231 aa18.77■□□□□ 0.59
Retrieved 100 of 22,080 RNA–protein pairs in 50.3 ms