RNA–Protein interactions for RNA: YOR171C

LCB4, Transcript of Sphingoid long-chain base kinase, yeastyeast

Gene LCB4, Length 1,875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB4YOR171C ARG81P05085 880 aa3.28□□□□□ -1.88
LCB4YOR171C STE3P06783 470 aa3.28□□□□□ -1.88
LCB4YOR171C ARG80P07249 177 aa3.28□□□□□ -1.88
LCB4YOR171C UNG1P12887 359 aa3.28□□□□□ -1.88
LCB4YOR171C FUS3P16892 353 aaKnown RBP3.28□□□□□ -1.88
LCB4YOR171C PWP1P21304 576 aaKnown RBP3.28□□□□□ -1.88
LCB4YOR171C RPI1P23250 407 aaKnown RBP3.28□□□□□ -1.88
LCB4YOR171C PRE8P23639 250 aa3.28□□□□□ -1.88
LCB4YOR171C CLB1P24868 471 aa3.28□□□□□ -1.88
LCB4YOR171C MSP1P28737 362 aa3.28□□□□□ -1.88
LCB4YOR171C MEI5P32489 222 aa3.28□□□□□ -1.88
LCB4YOR171C IFA38P38286 347 aa3.28□□□□□ -1.88
LCB4YOR171C YHL017WP38745 532 aa3.28□□□□□ -1.88
LCB4YOR171C PCL5P38794 229 aa3.28□□□□□ -1.88
LCB4YOR171C KEL1P38853 1164 aaKnown RBP3.28□□□□□ -1.88
LCB4YOR171C MNL1P38888 796 aa3.28□□□□□ -1.88
LCB4YOR171C SMC3P47037 1230 aa3.28□□□□□ -1.88
LCB4YOR171C YGR067CP53243 804 aa3.28□□□□□ -1.88
LCB4YOR171C YNR071CP53757 342 aa3.28□□□□□ -1.88
LCB4YOR171C VPS75P53853 264 aa3.28□□□□□ -1.88
LCB4YOR171C SMA1Q02651 245 aa3.28□□□□□ -1.88
LCB4YOR171C SNO4Q04902 237 aa3.28□□□□□ -1.88
LCB4YOR171C ECM22Q05958 814 aaPredicted RBP3.28□□□□□ -1.88
LCB4YOR171C MMR1Q06324 491 aa3.28□□□□□ -1.88
LCB4YOR171C HSP33Q08914 237 aaKnown RBP3.28□□□□□ -1.88
LCB4YOR171C HSP32Q08992 237 aa3.28□□□□□ -1.88
LCB4YOR171C YOL159C-AQ3E769 90 aa3.28□□□□□ -1.88
LCB4YOR171C LAM4P38800 1345 aa3.27□□□□□ -1.89
LCB4YOR171C PET494P07390 489 aaPredicted RBP3.27□□□□□ -1.89
LCB4YOR171C ADH4P10127 382 aa3.27□□□□□ -1.89
LCB4YOR171C ARG1P22768 420 aa3.27□□□□□ -1.89
LCB4YOR171C SRB2P34162 210 aa3.27□□□□□ -1.89
LCB4YOR171C HEL1P36113 551 aa3.27□□□□□ -1.89
LCB4YOR171C ADH5P38113 351 aaKnown RBP3.27□□□□□ -1.89
LCB4YOR171C CTP1P38152 299 aa3.27□□□□□ -1.89
LCB4YOR171C KSP1P38691 1029 aaKnown RBP3.27□□□□□ -1.89
LCB4YOR171C MUP3P38734 546 aa3.27□□□□□ -1.89
LCB4YOR171C SAW1P39735 261 aa3.27□□□□□ -1.89
LCB4YOR171C SCS2P40075 244 aaKnown RBP3.27□□□□□ -1.89
LCB4YOR171C PSF2P40359 213 aa3.27□□□□□ -1.89
LCB4YOR171C YIL089WP40500 205 aa3.27□□□□□ -1.89
LCB4YOR171C CTF18P49956 741 aa3.27□□□□□ -1.89
LCB4YOR171C MIG2P53035 382 aa3.27□□□□□ -1.89
LCB4YOR171C YGL242CP53066 181 aa3.27□□□□□ -1.89
LCB4YOR171C SQS1P53866 767 aaKnown RBP3.27□□□□□ -1.89
LCB4YOR171C SMX3P54999 86 aaPredicted RBP3.27□□□□□ -1.89
LCB4YOR171C MRPS17Q03246 237 aaPredicted RBP3.27□□□□□ -1.89
LCB4YOR171C ABZ2Q03266 374 aa3.27□□□□□ -1.89
LCB4YOR171C URC2Q04411 772 aa3.27□□□□□ -1.89
LCB4YOR171C ERV41Q04651 352 aa3.27□□□□□ -1.89
LCB4YOR171C IZH3Q07959 543 aa3.27□□□□□ -1.89
LCB4YOR171C RIO1Q12196 484 aaKnown RBP3.27□□□□□ -1.89
LCB4YOR171C TEF1P02994 458 aaKnown RBP3.26□□□□□ -1.89
LCB4YOR171C URA3P03962 267 aa3.26□□□□□ -1.89
LCB4YOR171C MDH1P17505 334 aaKnown RBP RIP-Chip data3.26□□□□□ -1.89not detected
LCB4YOR171C FAR1P21268 830 aa3.26□□□□□ -1.89
LCB4YOR171C SAC6P32599 642 aaKnown RBP3.26□□□□□ -1.89
LCB4YOR171C TGL1P34163 548 aa3.26□□□□□ -1.89
LCB4YOR171C RSM22P36056 628 aa3.26□□□□□ -1.89
LCB4YOR171C SMF2P38778 549 aa3.26□□□□□ -1.89
LCB4YOR171C UME6P39001 836 aa3.26□□□□□ -1.89
LCB4YOR171C YRB2P40517 327 aa3.26□□□□□ -1.89
LCB4YOR171C SSU1P41930 458 aa3.26□□□□□ -1.89
LCB4YOR171C ABM1P47146 123 aa3.26□□□□□ -1.89
LCB4YOR171C STB4P50104 949 aa3.26□□□□□ -1.89
LCB4YOR171C DUO1P53168 247 aaKnown RBP3.26□□□□□ -1.89
LCB4YOR171C MNT4P53745 580 aa3.26□□□□□ -1.89
LCB4YOR171C BSC5P53755 489 aa3.26□□□□□ -1.89
LCB4YOR171C PDR16P53860 351 aaKnown RBP3.26□□□□□ -1.89
LCB4YOR171C MAK10Q02197 733 aa3.26□□□□□ -1.89
LCB4YOR171C RPM2Q02773 1202 aa3.26□□□□□ -1.89
LCB4YOR171C ECM11Q04110 302 aa3.26□□□□□ -1.89
LCB4YOR171C BCP1Q06338 283 aa3.26□□□□□ -1.89
LCB4YOR171C VAC14Q06708 880 aa3.26□□□□□ -1.89
LCB4YOR171C LUC7Q07508 261 aaPredicted RBP3.26□□□□□ -1.89
LCB4YOR171C AIM41Q12032 185 aa3.26□□□□□ -1.89
LCB4YOR171C RPN5Q12250 445 aaKnown RBP3.26□□□□□ -1.89
LCB4YOR171C GIS3Q12418 502 aa3.26□□□□□ -1.89
LCB4YOR171C HEM1P09950 548 aaPredicted RBP3.26□□□□□ -1.89
LCB4YOR171C SEN2P16658 377 aa3.26□□□□□ -1.89
LCB4YOR171C DAL81P21657 970 aa3.26□□□□□ -1.89
LCB4YOR171C BOS1P25385 244 aa3.26□□□□□ -1.89
LCB4YOR171C FUB1P25659 250 aa3.26□□□□□ -1.89
LCB4YOR171C CDC15P27636 974 aa3.26□□□□□ -1.89
LCB4YOR171C NTH1P32356 751 aa3.26□□□□□ -1.89
LCB4YOR171C COT1P32798 439 aa3.26□□□□□ -1.89
LCB4YOR171C TCD1P38756 429 aa3.26□□□□□ -1.89
LCB4YOR171C PSD1P39006 500 aa3.26□□□□□ -1.89
LCB4YOR171C SSP120P39931 234 aaKnown RBP3.26□□□□□ -1.89
LCB4YOR171C YJR061WP40355 935 aa3.26□□□□□ -1.89
LCB4YOR171C TAH11P47112 604 aa3.26□□□□□ -1.89
LCB4YOR171C HSH155P49955 971 aaKnown RBP3.26□□□□□ -1.89
LCB4YOR171C YGR151CP53287 111 aa3.26□□□□□ -1.89
LCB4YOR171C ATG4P53867 494 aa3.26□□□□□ -1.89
LCB4YOR171C ESBP6P53918 673 aa3.26□□□□□ -1.89
LCB4YOR171C MUB1Q03162 620 aa3.26□□□□□ -1.89
LCB4YOR171C EFR3Q03653 782 aaKnown RBP3.26□□□□□ -1.89
LCB4YOR171C SEG1Q04279 960 aa3.26□□□□□ -1.89
LCB4YOR171C MSC3Q05812 728 aa3.26□□□□□ -1.89
LCB4YOR171C BOP2Q06150 570 aa3.26□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms