RNA–Protein interactions for RNA: YDR243C

PRP28, Transcript of RNA helicase in the DEAD-box family, yeastyeast

Gene PRP28, Length 1,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP28YDR243C GSH2Q08220 491 aa4.47□□□□□ -1.69
PRP28YDR243C RIM20Q12033 661 aa4.47□□□□□ -1.69
PRP28YDR243C PUS9Q12069 462 aa4.47□□□□□ -1.69
PRP28YDR243C NTO1Q12311 748 aa4.47□□□□□ -1.69
PRP28YDR243C DGK1Q12382 290 aa4.47□□□□□ -1.69
PRP28YDR243C AHC1Q12433 566 aa4.47□□□□□ -1.69
PRP28YDR243C PAA1Q12447 191 aaKnown RBP4.47□□□□□ -1.69
PRP28YDR243C SKM1Q12469 655 aa4.47□□□□□ -1.69
PRP28YDR243C RPL22AP05749 121 aaKnown RBP4.46□□□□□ -1.7
PRP28YDR243C LEU4P06208 619 aaKnown RBP4.46□□□□□ -1.7
PRP28YDR243C CHS1P08004 1131 aa4.46□□□□□ -1.7
PRP28YDR243C ABF1P14164 731 aa4.46□□□□□ -1.7
PRP28YDR243C CDC23P16522 626 aa4.46□□□□□ -1.7
PRP28YDR243C VPS33P20795 691 aa4.46□□□□□ -1.7
PRP28YDR243C FPS1P23900 669 aa4.46□□□□□ -1.7
PRP28YDR243C CNB1P25296 175 aa4.46□□□□□ -1.7
PRP28YDR243C CCR4P31384 837 aaKnown RBP4.46□□□□□ -1.7
PRP28YDR243C HXT1P32465 570 aa4.46□□□□□ -1.7
PRP28YDR243C GSH1P32477 678 aa4.46□□□□□ -1.7
PRP28YDR243C MRP4P32902 394 aa4.46□□□□□ -1.7
PRP28YDR243C WHI3P34761 661 aaKnown RBP4.46□□□□□ -1.7
PRP28YDR243C MAE1P36013 669 aaKnown RBP4.46□□□□□ -1.7
PRP28YDR243C SKG1P36169 355 aa4.46□□□□□ -1.7
PRP28YDR243C YBR139WP38109 508 aa4.46□□□□□ -1.7
PRP28YDR243C ARA1P38115 344 aa4.46□□□□□ -1.7
PRP28YDR243C MSG5P38590 489 aa4.46□□□□□ -1.7
PRP28YDR243C CBR1P38626 284 aaKnown RBP4.46□□□□□ -1.7
PRP28YDR243C DIA4P38705 446 aaPredicted RBP4.46□□□□□ -1.7
PRP28YDR243C YHL050CP38721 697 aa4.46□□□□□ -1.7
PRP28YDR243C GOS1P38736 223 aa4.46□□□□□ -1.7
PRP28YDR243C RIM4P38741 713 aa4.46□□□□□ -1.7
PRP28YDR243C YHR045WP38775 560 aa4.46□□□□□ -1.7
PRP28YDR243C QNS1P38795 714 aaKnown RBP4.46□□□□□ -1.7
PRP28YDR243C VMA13P41807 478 aaKnown RBP4.46□□□□□ -1.7
PRP28YDR243C PSA1P41940 361 aaKnown RBP4.46□□□□□ -1.7
PRP28YDR243C IDS2P46958 469 aa4.46□□□□□ -1.7
PRP28YDR243C SKP1P52286 194 aa4.46□□□□□ -1.7
PRP28YDR243C PIP2P52960 996 aa4.46□□□□□ -1.7
PRP28YDR243C SEH1P53011 349 aaKnown RBP4.46□□□□□ -1.7
PRP28YDR243C MND1P53102 219 aa4.46□□□□□ -1.7
PRP28YDR243C YGL036WP53185 909 aaPredicted RBP4.46□□□□□ -1.7
PRP28YDR243C PBP1P53297 722 aaKnown RBP4.46□□□□□ -1.7
PRP28YDR243C ADE16P54113 591 aaKnown RBP4.46□□□□□ -1.7
PRP28YDR243C YDR476CQ03362 224 aa4.46□□□□□ -1.7
PRP28YDR243C SWF1Q04629 336 aa4.46□□□□□ -1.7
PRP28YDR243C RTN1Q04947 295 aaKnown RBP4.46□□□□□ -1.7
PRP28YDR243C LUC7Q07508 261 aaPredicted RBP4.46□□□□□ -1.7
PRP28YDR243C YOR214CQ12282 236 aa4.46□□□□□ -1.7
PRP28YDR243C CET1O13297 549 aaPredicted RBP4.45□□□□□ -1.7
PRP28YDR243C TDH1P00360 332 aaKnown RBP4.45□□□□□ -1.7
PRP28YDR243C HXK1P04806 485 aaKnown RBP4.45□□□□□ -1.7
PRP28YDR243C GPH1P06738 902 aaKnown RBP4.45□□□□□ -1.7
PRP28YDR243C COR1P07256 457 aa4.45□□□□□ -1.7
PRP28YDR243C TUB1P09733 447 aaKnown RBP4.45□□□□□ -1.7
PRP28YDR243C PCK1P10963 549 aa4.45□□□□□ -1.7
PRP28YDR243C PUT4P15380 627 aa4.45□□□□□ -1.7
PRP28YDR243C YPK2P18961 677 aa4.45□□□□□ -1.7
PRP28YDR243C SPO11P23179 398 aa4.45□□□□□ -1.7
PRP28YDR243C SGV1P23293 657 aaKnown RBP4.45□□□□□ -1.7
PRP28YDR243C VMA3P25515 160 aa4.45□□□□□ -1.7
PRP28YDR243C FUN26P31381 517 aa4.45□□□□□ -1.7
PRP28YDR243C ISC10P32645 267 aa4.45□□□□□ -1.7
PRP28YDR243C TFB1P32776 642 aa4.45□□□□□ -1.7
PRP28YDR243C MGM101P32787 269 aaKnown RBP4.45□□□□□ -1.7
PRP28YDR243C JEN1P36035 616 aa4.45□□□□□ -1.7
PRP28YDR243C ELF1P36053 145 aa4.45□□□□□ -1.7
PRP28YDR243C YKL133CP36066 463 aa4.45□□□□□ -1.7
PRP28YDR243C YPK3P38070 525 aa4.45□□□□□ -1.7
PRP28YDR243C YBR032WP38223 100 aa4.45□□□□□ -1.7
PRP28YDR243C MSC7P38694 644 aa4.45□□□□□ -1.7
PRP28YDR243C PAN5P38787 379 aa4.45□□□□□ -1.7
PRP28YDR243C PZF1P39933 429 aa4.45□□□□□ -1.7
PRP28YDR243C SOK1P40317 901 aa4.45□□□□□ -1.7
PRP28YDR243C NEO1P40527 1151 aa4.45□□□□□ -1.7
PRP28YDR243C PKP1P40530 394 aa4.45□□□□□ -1.7
PRP28YDR243C RPE1P46969 238 aa4.45□□□□□ -1.7
PRP28YDR243C YJL016WP47072 561 aa4.45□□□□□ -1.7
PRP28YDR243C RPC17P47076 161 aa4.45□□□□□ -1.7
PRP28YDR243C RPS7BP48164 190 aaKnown RBP4.45□□□□□ -1.7
PRP28YDR243C USE1P53146 245 aa4.45□□□□□ -1.7
PRP28YDR243C TWF1P53250 332 aa4.45□□□□□ -1.7
PRP28YDR243C SNF12P53628 566 aa4.45□□□□□ -1.7
PRP28YDR243C RPT6Q01939 405 aaKnown RBP4.45□□□□□ -1.7
PRP28YDR243C ARL3Q02804 198 aa4.45□□□□□ -1.7
PRP28YDR243C SEN54Q02825 467 aaPredicted RBP4.45□□□□□ -1.7
PRP28YDR243C RTT103Q05543 409 aa4.45□□□□□ -1.7
PRP28YDR243C PNP1Q05788 311 aa4.45□□□□□ -1.7
PRP28YDR243C THI3Q07471 609 aa4.45□□□□□ -1.7
PRP28YDR243C YEH1Q07804 573 aa4.45□□□□□ -1.7
PRP28YDR243C DDC1Q08949 612 aa4.45□□□□□ -1.7
PRP28YDR243C AFT2Q08957 416 aa4.45□□□□□ -1.7
PRP28YDR243C FEX2Q08991 375 aa4.45□□□□□ -1.7
PRP28YDR243C WRS1Q12109 432 aaKnown RBP4.45□□□□□ -1.7
PRP28YDR243C DFG16Q99234 619 aa4.45□□□□□ -1.7
PRP28YDR243C AI5_ALPHAQ9ZZX1 630 aa4.45□□□□□ -1.7
PRP28YDR243C STF1P01098 86 aa4.45□□□□□ -1.7
PRP28YDR243C SCEIP03882 235 aa4.45□□□□□ -1.7
PRP28YDR243C ILV2P07342 687 aaKnown RBP4.45□□□□□ -1.7
PRP28YDR243C APA1P16550 321 aaKnown RBP4.45□□□□□ -1.7
PRP28YDR243C PFK1P16861 987 aaKnown RBP4.45□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms