RNA–Protein interactions for RNA: YDR073W

SNF11, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeast

Gene SNF11, Length 510 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNF11	YDR073W	DAD2	P36162	133 aa		5.78	□□□□□ -1.48
SNF11	YDR073W	RRT2	P38332	387 aa		5.78	□□□□□ -1.48
SNF11	YDR073W	KSP1	P38691	1029 aa	Known RBP	5.78	□□□□□ -1.48
SNF11	YDR073W	MRX1	P40050	688 aa		5.78	□□□□□ -1.48
SNF11	YDR073W	FAR3	P46671	204 aa		5.78	□□□□□ -1.48
SNF11	YDR073W	SNF12	P53628	566 aa		5.78	□□□□□ -1.48
SNF11	YDR073W	IST1	P53843	298 aa	Predicted RBP	5.78	□□□□□ -1.48
SNF11	YDR073W	ADE16	P54113	591 aa	Known RBP	5.78	□□□□□ -1.48
SNF11	YDR073W	AAT1	Q01802	451 aa		5.78	□□□□□ -1.48
SNF11	YDR073W	DPB4	Q04603	196 aa	Known RBP	5.78	□□□□□ -1.48
SNF11	YDR073W	YML053C	Q04978	212 aa		5.78	□□□□□ -1.48
SNF11	YDR073W	DON1	Q05610	365 aa		5.78	□□□□□ -1.48
SNF11	YDR073W	MMR1	Q06324	491 aa		5.78	□□□□□ -1.48
SNF11	YDR073W	YSP3	P25036	478 aa		5.77	□□□□□ -1.49
SNF11	YDR073W	SPB1	P25582	841 aa	Predicted RBP	5.77	□□□□□ -1.49
SNF11	YDR073W	BUD14	P27637	709 aa		5.77	□□□□□ -1.49
SNF11	YDR073W	GYP6	P32806	458 aa		5.77	□□□□□ -1.49
SNF11	YDR073W	NIP100	P33420	868 aa		5.77	□□□□□ -1.49
SNF11	YDR073W	LHS1	P36016	881 aa		5.77	□□□□□ -1.49
SNF11	YDR073W	SIF2	P38262	535 aa		5.77	□□□□□ -1.49
SNF11	YDR073W	GND1	P38720	489 aa	Known RBP	5.77	□□□□□ -1.49
SNF11	YDR073W	PIH1	P38768	344 aa		5.77	□□□□□ -1.49
SNF11	YDR073W	DPB11	P47027	764 aa	Predicted RBP	5.77	□□□□□ -1.49
SNF11	YDR073W	YGR127W	P53275	312 aa		5.77	□□□□□ -1.49
SNF11	YDR073W	YNL144C	P53907	740 aa		5.77	□□□□□ -1.49
SNF11	YDR073W	HOT1	Q03213	719 aa		5.77	□□□□□ -1.49
SNF11	YDR073W	HEL2	Q05580	639 aa	Known RBP	5.77	□□□□□ -1.49
SNF11	YDR073W	YDL073W	Q07454	984 aa		5.77	□□□□□ -1.49
SNF11	YDR073W	APL4	Q12028	832 aa		5.77	□□□□□ -1.49
SNF11	YDR073W	CHO2	P05374	869 aa	Known RBP	5.76	□□□□□ -1.49
SNF11	YDR073W	HXT3	P32466	567 aa	Known RBP	5.76	□□□□□ -1.49
SNF11	YDR073W	YME1	P32795	747 aa		5.76	□□□□□ -1.49
SNF11	YDR073W	MUP3	P38734	546 aa		5.76	□□□□□ -1.49
SNF11	YDR073W	UIP3	P39547	235 aa		5.76	□□□□□ -1.49
SNF11	YDR073W	PCL7	P40186	285 aa		5.76	□□□□□ -1.49
SNF11	YDR073W	VMA13	P41807	478 aa	Known RBP	5.76	□□□□□ -1.49
SNF11	YDR073W	ECL1	P48235	211 aa		5.76	□□□□□ -1.49
SNF11	YDR073W	PRP43	P53131	767 aa	Known RBP	5.76	□□□□□ -1.49
SNF11	YDR073W	COG2	P53271	262 aa		5.76	□□□□□ -1.49
SNF11	YDR073W	EFM6	P53970	246 aa		5.76	□□□□□ -1.49
SNF11	YDR073W	RPC11	Q04307	110 aa	Predicted RBP	5.76	□□□□□ -1.49
SNF11	YDR073W	VPS54	Q12071	889 aa		5.76	□□□□□ -1.49
SNF11	YDR073W	LAM4	P38800	1345 aa		5.75	□□□□□ -1.49
SNF11	YDR073W	RPC40	P07703	335 aa	Known RBP	5.75	□□□□□ -1.49
SNF11	YDR073W	SRP54	P20424	541 aa	Known RBP	5.75	□□□□□ -1.49
SNF11	YDR073W	STE11	P23561	717 aa		5.75	□□□□□ -1.49
SNF11	YDR073W	PRD1	P25375	712 aa		5.75	□□□□□ -1.49
SNF11	YDR073W	YME2	P32843	850 aa		5.75	□□□□□ -1.49
SNF11	YDR073W	TIF3	P34167	436 aa	Known RBP	5.75	□□□□□ -1.49
SNF11	YDR073W	YBR144C	P34215	104 aa		5.75	□□□□□ -1.49
SNF11	YDR073W	OMA1	P36163	345 aa		5.75	□□□□□ -1.49
SNF11	YDR073W	SLM4	P38247	162 aa		5.75	□□□□□ -1.49
SNF11	YDR073W	WSS1	P38838	269 aa		5.75	□□□□□ -1.49
SNF11	YDR073W	CCT7	P42943	550 aa	Known RBP	5.75	□□□□□ -1.49
SNF11	YDR073W	MCM6	P53091	1017 aa	Known RBP	5.75	□□□□□ -1.49
SNF11	YDR073W	RBS1	Q05672	457 aa	Known RBP	5.75	□□□□□ -1.49
SNF11	YDR073W	INP53	Q12271	1107 aa		5.75	□□□□□ -1.49
SNF11	YDR073W	TRM13	Q12383	476 aa		5.75	□□□□□ -1.49
SNF11	YDR073W	RPL6B	P05739	176 aa	Known RBP	5.74	□□□□□ -1.49
SNF11	YDR073W	MRP13	P12686	339 aa		5.74	□□□□□ -1.49
SNF11	YDR073W	STE4	P18851	423 aa		5.74	□□□□□ -1.49
SNF11	YDR073W	ERG4	P25340	473 aa		5.74	□□□□□ -1.49
SNF11	YDR073W	IMG1	P25626	169 aa		5.74	□□□□□ -1.49
SNF11	YDR073W	GSH1	P32477	678 aa		5.74	□□□□□ -1.49
SNF11	YDR073W	RML2	P32611	393 aa		5.74	□□□□□ -1.49
SNF11	YDR073W	UGP1	P32861	499 aa	Known RBP	5.74	□□□□□ -1.49
SNF11	YDR073W	ECM10	P39987	644 aa		5.74	□□□□□ -1.49
SNF11	YDR073W	ASG1	P40467	964 aa		5.74	□□□□□ -1.49
SNF11	YDR073W	STB2	P46679	850 aa		5.74	□□□□□ -1.49
SNF11	YDR073W	ATG4	P53867	494 aa		5.74	□□□□□ -1.49
SNF11	YDR073W	YNL092W	P53934	400 aa		5.74	□□□□□ -1.49
SNF11	YDR073W	RPL6A	Q02326	176 aa	Known RBP	5.74	□□□□□ -1.49
SNF11	YDR073W	PDS5	Q04264	1277 aa		5.74	□□□□□ -1.49
SNF11	YDR073W	BMS1	Q08965	1183 aa	Known RBP	5.74	□□□□□ -1.49
SNF11	YDR073W	TAF3	Q12297	353 aa		5.74	□□□□□ -1.49
SNF11	YDR073W	INO80	P53115	1489 aa		5.73	□□□□□ -1.49
SNF11	YDR073W	HIP1	P06775	603 aa		5.73	□□□□□ -1.49
SNF11	YDR073W	RPL1A	P0CX43	217 aa	Known RBP	5.73	□□□□□ -1.49
SNF11	YDR073W	RPL1B	P0CX44	217 aa	Known RBP	5.73	□□□□□ -1.49
SNF11	YDR073W	SRV2	P17555	526 aa	Known RBP	5.73	□□□□□ -1.49
SNF11	YDR073W	ART10	P18634	518 aa	Known RBP	5.73	□□□□□ -1.49
SNF11	YDR073W	SPE2	P21182	396 aa		5.73	□□□□□ -1.49
SNF11	YDR073W	PPH22	P23595	377 aa		5.73	□□□□□ -1.49
SNF11	YDR073W	YEL043W	P32618	956 aa		5.73	□□□□□ -1.49
SNF11	YDR073W	GDA1	P32621	518 aa		5.73	□□□□□ -1.49
SNF11	YDR073W	TUL1	P36096	758 aa		5.73	□□□□□ -1.49
SNF11	YDR073W	YPT10	P38146	199 aa		5.73	□□□□□ -1.49
SNF11	YDR073W	AIM3	P38266	947 aa	Known RBP	5.73	□□□□□ -1.49
SNF11	YDR073W	GDT1	P38301	280 aa	Predicted RBP	5.73	□□□□□ -1.49
SNF11	YDR073W	NTC20	P38302	140 aa	Predicted RBP	5.73	□□□□□ -1.49
SNF11	YDR073W	GIP4	P39732	760 aa		5.73	□□□□□ -1.49
SNF11	YDR073W	PMT6	P42934	759 aa		5.73	□□□□□ -1.49
SNF11	YDR073W	PTR3	P43606	678 aa		5.73	□□□□□ -1.49
SNF11	YDR073W	BUL1	P48524	976 aa		5.73	□□□□□ -1.49
SNF11	YDR073W	MNN10	P50108	393 aa	Known RBP	5.73	□□□□□ -1.49
SNF11	YDR073W	VPS73	P53142	486 aa	Known RBP	5.73	□□□□□ -1.49
SNF11	YDR073W	HST1	P53685	503 aa		5.73	□□□□□ -1.49
SNF11	YDR073W	RNT1	Q02555	471 aa		5.73	□□□□□ -1.49
SNF11	YDR073W	GFD1	Q04839	188 aa	Known RBP	5.73	□□□□□ -1.49
SNF11	YDR073W	RRP45	Q05636	305 aa	Known RBP	5.73	□□□□□ -1.49

Retrieved 100 of 5,963 RNA–protein pairs in 49.4 ms