RNA–Protein interactions for RNA: YDL212W

SHR3, Transcript of Endoplasmic reticulum packaging chaperone, yeastyeast

Gene SHR3, Length 633 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHR3YDL212W ATG26Q06321 1198 aa4.35□□□□□ -1.71
SHR3YDL212W YMR230W-AQ3E7B5 62 aa4.35□□□□□ -1.71
SHR3YDL212W LCB1P25045 558 aaKnown RBP4.34□□□□□ -1.71
SHR3YDL212W GID7P25569 745 aa4.34□□□□□ -1.71
SHR3YDL212W RGT1P32862 1170 aa4.34□□□□□ -1.71
SHR3YDL212W KTR3P38130 404 aaPredicted RBP4.34□□□□□ -1.71
SHR3YDL212W RTT107P38850 1070 aa4.34□□□□□ -1.71
SHR3YDL212W RPS10BP46784 105 aaKnown RBP4.34□□□□□ -1.71
SHR3YDL212W YGL260WP53056 76 aa4.34□□□□□ -1.71
SHR3YDL212W CUL3P53202 744 aa4.34□□□□□ -1.71
SHR3YDL212W RTS3P53289 263 aa4.34□□□□□ -1.71
SHR3YDL212W YLR352WQ06479 807 aa4.34□□□□□ -1.71
SHR3YDL212W RTT109Q07794 436 aa4.34□□□□□ -1.71
SHR3YDL212W SSP2Q08646 371 aa4.34□□□□□ -1.71
SHR3YDL212W TAH18Q12181 623 aa4.34□□□□□ -1.71
SHR3YDL212W RRN3P36070 627 aa4.33□□□□□ -1.72
SHR3YDL212W FMP46P36141 133 aaKnown RBP4.33□□□□□ -1.72
SHR3YDL212W AZF1P41696 914 aa4.33□□□□□ -1.72
SHR3YDL212W SMC3P47037 1230 aa4.33□□□□□ -1.72
SHR3YDL212W VMS1Q04311 632 aaKnown RBP4.33□□□□□ -1.72
SHR3YDL212W YTH1Q06102 208 aaPredicted RBP4.33□□□□□ -1.72
SHR3YDL212W RIX7Q07844 837 aaKnown RBP4.33□□□□□ -1.72
SHR3YDL212W ENT4Q07872 247 aa4.33□□□□□ -1.72
SHR3YDL212W RPS10AQ08745 105 aaPredicted RBP4.33□□□□□ -1.72
SHR3YDL212W GLN3P18494 730 aa4.32□□□□□ -1.72
SHR3YDL212W RPN2P32565 945 aaKnown RBP4.32□□□□□ -1.72
SHR3YDL212W DIA4P38705 446 aaPredicted RBP4.32□□□□□ -1.72
SHR3YDL212W CCT4P39078 528 aaKnown RBP4.32□□□□□ -1.72
SHR3YDL212W UIP3P39547 235 aa4.32□□□□□ -1.72
SHR3YDL212W YER130CP39959 443 aa4.32□□□□□ -1.72
SHR3YDL212W KAP123P40069 1113 aaKnown RBP4.32□□□□□ -1.72
SHR3YDL212W BUR6P40096 142 aa4.32□□□□□ -1.72
SHR3YDL212W DPH1P40487 425 aaKnown RBP4.32□□□□□ -1.72
SHR3YDL212W YIR014WP40570 242 aa4.32□□□□□ -1.72
SHR3YDL212W GUF1P46943 645 aa4.32□□□□□ -1.72
SHR3YDL212W SIP4P46954 829 aa4.32□□□□□ -1.72
SHR3YDL212W AAD10P47182 288 aa4.32□□□□□ -1.72
SHR3YDL212W SOL4P53315 255 aa4.32□□□□□ -1.72
SHR3YDL212W VIP1Q06685 1146 aaKnown RBP4.32□□□□□ -1.72
SHR3YDL212W CSR2Q12734 1121 aa4.32□□□□□ -1.72
SHR3YDL212W PWP1P21304 576 aaKnown RBP4.31□□□□□ -1.72
SHR3YDL212W PDB1P32473 366 aaKnown RBP4.31□□□□□ -1.72
SHR3YDL212W YKL050CP35736 922 aa4.31□□□□□ -1.72
SHR3YDL212W ERG7P38604 731 aa4.31□□□□□ -1.72
SHR3YDL212W UBA4P38820 440 aa4.31□□□□□ -1.72
SHR3YDL212W LYS4P49367 693 aaPredicted RBP4.31□□□□□ -1.72
SHR3YDL212W YDR415CQ04033 374 aaPredicted RBP4.31□□□□□ -1.72
SHR3YDL212W APL4Q12028 832 aa4.31□□□□□ -1.72
SHR3YDL212W YOR111WQ99210 232 aa4.31□□□□□ -1.72
SHR3YDL212W PHO2P07269 559 aa4.3□□□□□ -1.72
SHR3YDL212W SNF3P10870 884 aa4.3□□□□□ -1.72
SHR3YDL212W TRX2P22803 104 aaKnown RBP4.3□□□□□ -1.72
SHR3YDL212W SPC34P36131 295 aa4.3□□□□□ -1.72
SHR3YDL212W YNG2P38806 282 aaKnown RBP4.3□□□□□ -1.72
SHR3YDL212W YJR061WP40355 935 aa4.3□□□□□ -1.72
SHR3YDL212W CBK1P53894 756 aa4.3□□□□□ -1.72
SHR3YDL212W RPS2P25443 254 aaKnown RBP4.29□□□□□ -1.72
SHR3YDL212W TRS65P32893 560 aa4.29□□□□□ -1.72
SHR3YDL212W RIM2P38127 377 aa4.29□□□□□ -1.72
SHR3YDL212W TSC10P38342 320 aa4.29□□□□□ -1.72
SHR3YDL212W ELO1P39540 310 aa4.29□□□□□ -1.72
SHR3YDL212W RGI2P40188 164 aa4.29□□□□□ -1.72
SHR3YDL212W SGM1P47166 707 aa4.29□□□□□ -1.72
SHR3YDL212W TMA64Q04600 565 aaKnown RBP4.29□□□□□ -1.72
SHR3YDL212W PSR1Q07800 427 aa4.29□□□□□ -1.72
SHR3YDL212W RDR1Q08904 546 aa4.29□□□□□ -1.72
SHR3YDL212W MCM4P30665 933 aaKnown RBP4.28□□□□□ -1.72
SHR3YDL212W SYN8P31377 255 aa4.28□□□□□ -1.72
SHR3YDL212W PHD1P36093 366 aa4.28□□□□□ -1.72
SHR3YDL212W YJL070CP40361 888 aa4.28□□□□□ -1.72
SHR3YDL212W PYK2P52489 506 aaKnown RBP4.28□□□□□ -1.72
SHR3YDL212W RAD30Q04049 632 aa4.28□□□□□ -1.72
SHR3YDL212W EMI2Q04409 500 aaKnown RBP4.28□□□□□ -1.72
SHR3YDL212W GRC3Q07845 632 aa4.28□□□□□ -1.72
SHR3YDL212W DAP1Q12091 152 aa4.28□□□□□ -1.72
SHR3YDL212W PUT2P07275 575 aa4.27□□□□□ -1.73
SHR3YDL212W FUM1P08417 488 aaKnown RBP4.27□□□□□ -1.73
SHR3YDL212W ERG1P32476 496 aaKnown RBP4.27□□□□□ -1.73
SHR3YDL212W DIA3P52290 468 aa4.27□□□□□ -1.73
SHR3YDL212W MEP3P53390 489 aa4.27□□□□□ -1.73
SHR3YDL212W YSA1Q01976 231 aa4.27□□□□□ -1.73
SHR3YDL212W RTT103Q05543 409 aa4.27□□□□□ -1.73
SHR3YDL212W NBP2Q12163 236 aa4.27□□□□□ -1.73
SHR3YDL212W TIP41Q12199 356 aa4.27□□□□□ -1.73
SHR3YDL212W NKP1Q12493 238 aa4.27□□□□□ -1.73
SHR3YDL212W MRS3P10566 314 aa4.26□□□□□ -1.73
SHR3YDL212W PMS1P14242 873 aa4.26□□□□□ -1.73
SHR3YDL212W SGV1P23293 657 aaKnown RBP4.26□□□□□ -1.73
SHR3YDL212W DBP8P38719 431 aa4.26□□□□□ -1.73
SHR3YDL212W RBA50Q04418 439 aa4.26□□□□□ -1.73
SHR3YDL212W DIC1Q06143 298 aa4.26□□□□□ -1.73
SHR3YDL212W FMP45Q07651 309 aa4.26□□□□□ -1.73
SHR3YDL212W TEN1Q07921 160 aa4.26□□□□□ -1.73
SHR3YDL212W PDA1P16387 420 aaKnown RBP4.25□□□□□ -1.73
SHR3YDL212W KAR3P17119 729 aa4.25□□□□□ -1.73
SHR3YDL212W KGD1P20967 1014 aaKnown RBP4.25□□□□□ -1.73
SHR3YDL212W SPE2P21182 396 aa4.25□□□□□ -1.73
SHR3YDL212W ACH1P32316 526 aa4.25□□□□□ -1.73
SHR3YDL212W MAL33P38157 468 aa4.25□□□□□ -1.73
SHR3YDL212W ARC1P46672 376 aaKnown RBP4.25□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 51.8 ms