RNA–Protein interactions for RNA: YDL061C

RPS29B, Transcript of Protein component of the small (40S) ribosomal subunit, yeast

Gene RPS29B, Length 171 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPS29B	YDL061C	EFM6	P53970	246 aa		3.59	□□□□□ -1.83
RPS29B	YDL061C	RPS15	Q01855	142 aa	Known RBP	3.59	□□□□□ -1.83
RPS29B	YDL061C	ARX1	Q03862	593 aa	Known RBP	3.59	□□□□□ -1.83
RPS29B	YDL061C	YDR109C	Q04585	715 aa		3.59	□□□□□ -1.83
RPS29B	YDL061C	RRP45	Q05636	305 aa	Known RBP	3.59	□□□□□ -1.83
RPS29B	YDL061C	MCA1	Q08601	432 aa		3.59	□□□□□ -1.83
RPS29B	YDL061C	RKI1	Q12189	258 aa		3.59	□□□□□ -1.83
RPS29B	YDL061C	RPN5	Q12250	445 aa	Known RBP	3.59	□□□□□ -1.83
RPS29B	YDL061C	TRP3	P00937	484 aa		3.58	□□□□□ -1.84
RPS29B	YDL061C	RPS13	P05756	151 aa	Known RBP	3.58	□□□□□ -1.84
RPS29B	YDL061C	DAL80	P26343	269 aa		3.58	□□□□□ -1.84
RPS29B	YDL061C	POT1	P27796	417 aa	Known RBP RIP-Chip data	3.58	□□□□□ -1.84	not detected
RPS29B	YDL061C	GSH1	P32477	678 aa		3.58	□□□□□ -1.84
RPS29B	YDL061C	YME2	P32843	850 aa		3.58	□□□□□ -1.84
RPS29B	YDL061C	WSS1	P38838	269 aa		3.58	□□□□□ -1.84
RPS29B	YDL061C	RPS7B	P48164	190 aa	Known RBP	3.58	□□□□□ -1.84
RPS29B	YDL061C	IMD4	P50094	524 aa	Known RBP	3.58	□□□□□ -1.84
RPS29B	YDL061C	FMS1	P50264	508 aa		3.58	□□□□□ -1.84
RPS29B	YDL061C	MLC1	P53141	149 aa		3.58	□□□□□ -1.84
RPS29B	YDL061C	COG2	P53271	262 aa		3.58	□□□□□ -1.84
RPS29B	YDL061C	DIP5	P53388	608 aa		3.58	□□□□□ -1.84
RPS29B	YDL061C	ATG4	P53867	494 aa		3.58	□□□□□ -1.84
RPS29B	YDL061C	SKO1	Q02100	647 aa		3.58	□□□□□ -1.84
RPS29B	YDL061C	YMR111C	Q04461	462 aa	Predicted RBP	3.58	□□□□□ -1.84
RPS29B	YDL061C	YDL242W	Q07746	117 aa		3.58	□□□□□ -1.84
RPS29B	YDL061C	IRC13	Q08630	104 aa		3.58	□□□□□ -1.84
RPS29B	YDL061C	LEU9	Q12166	604 aa	Known RBP	3.58	□□□□□ -1.84
RPS29B	YDL061C	INP53	Q12271	1107 aa		3.58	□□□□□ -1.84
RPS29B	YDL061C	NBL1	Q3E7Y6	73 aa		3.58	□□□□□ -1.84
RPS29B	YDL061C	DFG16	Q99234	619 aa		3.58	□□□□□ -1.84
RPS29B	YDL061C	COX1	P00401	534 aa		3.57	□□□□□ -1.84
RPS29B	YDL061C	RPC40	P07703	335 aa	Known RBP	3.57	□□□□□ -1.84
RPS29B	YDL061C	RPL1A	P0CX43	217 aa	Known RBP	3.57	□□□□□ -1.84
RPS29B	YDL061C	RPL1B	P0CX44	217 aa	Known RBP	3.57	□□□□□ -1.84
RPS29B	YDL061C	YPK1	P12688	680 aa	Known RBP	3.57	□□□□□ -1.84
RPS29B	YDL061C	RPL3	P14126	387 aa	Known RBP	3.57	□□□□□ -1.84
RPS29B	YDL061C	SRV2	P17555	526 aa	Known RBP	3.57	□□□□□ -1.84
RPS29B	YDL061C	ERV1	P27882	189 aa		3.57	□□□□□ -1.84
RPS29B	YDL061C	YME1	P32795	747 aa		3.57	□□□□□ -1.84
RPS29B	YDL061C	YBR144C	P34215	104 aa		3.57	□□□□□ -1.84
RPS29B	YDL061C	YKR073C	P36153	106 aa		3.57	□□□□□ -1.84
RPS29B	YDL061C	SLM4	P38247	162 aa		3.57	□□□□□ -1.84
RPS29B	YDL061C	SIF2	P38262	535 aa		3.57	□□□□□ -1.84
RPS29B	YDL061C	RRT2	P38332	387 aa		3.57	□□□□□ -1.84
RPS29B	YDL061C	MTG2	P38860	518 aa		3.57	□□□□□ -1.84
RPS29B	YDL061C	ARG2	P40360	574 aa		3.57	□□□□□ -1.84
RPS29B	YDL061C	EFM4	P40516	257 aa		3.57	□□□□□ -1.84
RPS29B	YDL061C	SGN1	P40561	250 aa	Known RBP RIP-Chip data	3.57	□□□□□ -1.84	not detected
RPS29B	YDL061C	VMA13	P41807	478 aa	Known RBP	3.57	□□□□□ -1.84
RPS29B	YDL061C	MAF1	P41910	395 aa		3.57	□□□□□ -1.84
RPS29B	YDL061C	SWP82	P43554	623 aa		3.57	□□□□□ -1.84
RPS29B	YDL061C	STB2	P46679	850 aa		3.57	□□□□□ -1.84
RPS29B	YDL061C	NPA3	P47122	385 aa		3.57	□□□□□ -1.84
RPS29B	YDL061C	MNN10	P50108	393 aa	Known RBP	3.57	□□□□□ -1.84
RPS29B	YDL061C	RIM8	P53179	542 aa		3.57	□□□□□ -1.84
RPS29B	YDL061C	SNF12	P53628	566 aa		3.57	□□□□□ -1.84
RPS29B	YDL061C	ARP5	P53946	755 aa		3.57	□□□□□ -1.84
RPS29B	YDL061C	YNL058C	P53947	316 aa		3.57	□□□□□ -1.84
RPS29B	YDL061C	FRE3	Q08905	711 aa		3.57	□□□□□ -1.84
RPS29B	YDL061C	KEL3	Q08979	651 aa	Predicted RBP	3.57	□□□□□ -1.84
RPS29B	YDL061C	USV1	Q12132	391 aa		3.57	□□□□□ -1.84
RPS29B	YDL061C	RLM1	Q12224	676 aa		3.57	□□□□□ -1.84
RPS29B	YDL061C	HER1	Q12276	1246 aa		3.57	□□□□□ -1.84
RPS29B	YDL061C	TAF3	Q12297	353 aa		3.57	□□□□□ -1.84
RPS29B	YDL061C	ISN1	Q99312	450 aa		3.57	□□□□□ -1.84
RPS29B	YDL061C	AI5_ALPHA	Q9ZZX1	630 aa		3.57	□□□□□ -1.84
RPS29B	YDL061C	HIP1	P06775	603 aa		3.56	□□□□□ -1.84
RPS29B	YDL061C	WHI2	P12611	486 aa		3.56	□□□□□ -1.84
RPS29B	YDL061C	ART10	P18634	518 aa	Known RBP	3.56	□□□□□ -1.84
RPS29B	YDL061C	SRP54	P20424	541 aa	Known RBP	3.56	□□□□□ -1.84
RPS29B	YDL061C	SNT1	P25357	1226 aa		3.56	□□□□□ -1.84
RPS29B	YDL061C	BOS1	P25385	244 aa		3.56	□□□□□ -1.84
RPS29B	YDL061C	PUP3	P25451	205 aa	Known RBP	3.56	□□□□□ -1.84
RPS29B	YDL061C	HXT3	P32466	567 aa	Known RBP	3.56	□□□□□ -1.84
RPS29B	YDL061C	SSE1	P32589	693 aa	Known RBP	3.56	□□□□□ -1.84
RPS29B	YDL061C	RML2	P32611	393 aa		3.56	□□□□□ -1.84
RPS29B	YDL061C	SNU114	P36048	1008 aa	Known RBP	3.56	□□□□□ -1.84
RPS29B	YDL061C	VBA2	P38358	474 aa	Known RBP	3.56	□□□□□ -1.84
RPS29B	YDL061C	ECM10	P39987	644 aa		3.56	□□□□□ -1.84
RPS29B	YDL061C	RTT105	P40063	208 aa		3.56	□□□□□ -1.84
RPS29B	YDL061C	OPT1	P40897	799 aa		3.56	□□□□□ -1.84
RPS29B	YDL061C	PTR3	P43606	678 aa		3.56	□□□□□ -1.84
RPS29B	YDL061C	YGR149W	P48236	432 aa		3.56	□□□□□ -1.84
RPS29B	YDL061C	APT1	P49435	187 aa	Known RBP	3.56	□□□□□ -1.84
RPS29B	YDL061C	YGL138C	P53122	345 aa		3.56	□□□□□ -1.84
RPS29B	YDL061C	IPI3	P53877	555 aa		3.56	□□□□□ -1.84
RPS29B	YDL061C	RNT1	Q02555	471 aa		3.56	□□□□□ -1.84
RPS29B	YDL061C	RGC1	Q06108	1083 aa	Known RBP	3.56	□□□□□ -1.84
RPS29B	YDL061C	YLR456W	Q06199	204 aa		3.56	□□□□□ -1.84
RPS29B	YDL061C	MMR1	Q06324	491 aa		3.56	□□□□□ -1.84
RPS29B	YDL061C	CDC45	Q08032	650 aa		3.56	□□□□□ -1.84
RPS29B	YDL061C	SLK19	Q08581	821 aa	Known RBP	3.56	□□□□□ -1.84
RPS29B	YDL061C	MLH3	Q12083	715 aa		3.56	□□□□□ -1.84
RPS29B	YDL061C	AEP3	Q12089	606 aa		3.56	□□□□□ -1.84
RPS29B	YDL061C	RTC5	Q12108	567 aa	Known RBP	3.56	□□□□□ -1.84
RPS29B	YDL061C	LCB4	Q12246	624 aa		3.56	□□□□□ -1.84
RPS29B	YDL061C	YDL007C-A	Q2V2Q0	85 aa		3.56	□□□□□ -1.84
RPS29B	YDL061C	TFB5	Q3E7C1	72 aa	Predicted RBP	3.56	□□□□□ -1.84
RPS29B	YDL061C	YLR278C	Q05854	1341 aa		3.55	□□□□□ -1.84
RPS29B	YDL061C	YLR358C	O13565	187 aa		3.55	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 40.3 ms