RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 LONP1P36776 959 aaKnown RBP22.41■■□□□ 1.18
PCDHB11-202ENST00000624887 FKBP1AP62942 108 aaKnown RBP22.41■■□□□ 1.18
PCDHB11-202ENST00000624887 MRIQ9BWK5 157 aa22.41■■□□□ 1.18
PCDHB11-202ENST00000624887 FANCLQ9NW38 375 aa22.41■■□□□ 1.18
PCDHB11-202ENST00000624887 C10orf71Q711Q0 1435 aa22.41■■□□□ 1.18
PCDHB11-202ENST00000624887 PDHBP11177 359 aa22.41■■□□□ 1.18
PCDHB11-202ENST00000624887 CRKP46108 304 aa22.41■■□□□ 1.18
PCDHB11-202ENST00000624887 E2F4Q16254 413 aa22.41■■□□□ 1.18
PCDHB11-202ENST00000624887 IQUBQ8NA54 791 aa22.41■■□□□ 1.18
PCDHB11-202ENST00000624887 ENOX1Q8TC92 643 aaKnown RBP22.41■■□□□ 1.18
PCDHB11-202ENST00000624887 ZDHHC15Q96MV8 337 aa22.41■■□□□ 1.18
PCDHB11-202ENST00000624887 SEC63Q9UGP8 760 aaKnown RBP22.41■■□□□ 1.18
PCDHB11-202ENST00000624887 SLX4Q8IY92 1834 aa22.41■■□□□ 1.18
PCDHB11-202ENST00000624887 CBFA2T2O43439 604 aa22.4■■□□□ 1.18
PCDHB11-202ENST00000624887 AFMP43652 599 aa22.4■■□□□ 1.18
PCDHB11-202ENST00000624887 NAPAP54920 295 aa22.4■■□□□ 1.18
PCDHB11-202ENST00000624887 DPYDQ12882 1025 aa22.4■■□□□ 1.18
PCDHB11-202ENST00000624887 CT47A1Q5JQC4 288 aaPredicted RBP22.4■■□□□ 1.18
PCDHB11-202ENST00000624887 STRIP1Q5VSL9 837 aa22.4■■□□□ 1.18
PCDHB11-202ENST00000624887 GSDMAQ96QA5 445 aa22.4■■□□□ 1.18
PCDHB11-202ENST00000624887 RIOX1Q9H6W3 641 aa22.4■■□□□ 1.18
PCDHB11-202ENST00000624887 SNHG28P0DPA3 235 aa22.39■■□□□ 1.18
PCDHB11-202ENST00000624887 SHMT1P34896 483 aa22.39■■□□□ 1.18
PCDHB11-202ENST00000624887 UBASH3AP57075 661 aa22.39■■□□□ 1.18
PCDHB11-202ENST00000624887 CCZ1BP86790 482 aa22.39■■□□□ 1.18
PCDHB11-202ENST00000624887 CCZ1P86791 482 aaPredicted RBP22.39■■□□□ 1.18
PCDHB11-202ENST00000624887 DHX8Q14562 1220 aaKnown RBP22.39■■□□□ 1.18
PCDHB11-202ENST00000624887 ASPRV1Q53RT3 343 aa22.39■■□□□ 1.18
PCDHB11-202ENST00000624887 TMC6Q7Z403 805 aa22.39■■□□□ 1.18
PCDHB11-202ENST00000624887 SLC16A10Q8TF71 515 aa22.39■■□□□ 1.18
PCDHB11-202ENST00000624887 KCNQ5Q9NR82 932 aa22.39■■□□□ 1.18
PCDHB11-202ENST00000624887 SERPINC1P01008 464 aa22.39■■□□□ 1.17
PCDHB11-202ENST00000624887 HLA-DOAP06340 250 aa22.39■■□□□ 1.17
PCDHB11-202ENST00000624887 SKILP12757 684 aa22.39■■□□□ 1.17
PCDHB11-202ENST00000624887 GNA11P29992 359 aa22.39■■□□□ 1.17
PCDHB11-202ENST00000624887 FMR1Q06787 632 aaKnown RBP eCLIP22.39■■□□□ 1.17
PCDHB11-202ENST00000624887 INF2Q27J81 1249 aa22.39■■□□□ 1.17
PCDHB11-202ENST00000624887 HOMER1Q86YM7 354 aa22.39■■□□□ 1.17
PCDHB11-202ENST00000624887 PRIMPOLQ96LW4 560 aa22.39■■□□□ 1.17
PCDHB11-202ENST00000624887 C6orf50Q9HD87 102 aa22.39■■□□□ 1.17
PCDHB11-202ENST00000624887 TTLL1O95922 423 aa22.38■■□□□ 1.17
PCDHB11-202ENST00000624887 ERCC5P28715 1186 aaPredicted RBP22.38■■□□□ 1.17
PCDHB11-202ENST00000624887 PIGSQ96S52 555 aa22.38■■□□□ 1.17
PCDHB11-202ENST00000624887 SMCO2A6NFE2 343 aa22.38■■□□□ 1.17
PCDHB11-202ENST00000624887 hCG_1984214I3L0E3 225 aa22.38■■□□□ 1.17
PCDHB11-202ENST00000624887 LAD1O00515 517 aa22.38■■□□□ 1.17
PCDHB11-202ENST00000624887 HDLBPQ00341 1268 aaKnown RBP22.38■■□□□ 1.17
PCDHB11-202ENST00000624887 NFIAQ12857 509 aa22.38■■□□□ 1.17
PCDHB11-202ENST00000624887 DACT2Q5SW24 774 aa22.38■■□□□ 1.17
PCDHB11-202ENST00000624887 PDXDC2PQ6P474 469 aa22.38■■□□□ 1.17
PCDHB11-202ENST00000624887 KRT25Q7Z3Z0 450 aa22.38■■□□□ 1.17
PCDHB11-202ENST00000624887 ZNF713Q8N859 430 aaPredicted RBP22.38■■□□□ 1.17
PCDHB11-202ENST00000624887 CCDC150Q8NCX0 1101 aa22.38■■□□□ 1.17
PCDHB11-202ENST00000624887 CNKSR1Q969H4 720 aa22.38■■□□□ 1.17
PCDHB11-202ENST00000624887 UBA5Q9GZZ9 404 aa22.38■■□□□ 1.17
PCDHB11-202ENST00000624887 EHD4Q9H223 541 aa22.38■■□□□ 1.17
PCDHB11-202ENST00000624887 SCN9AQ15858 1988 aa22.37■■□□□ 1.17
PCDHB11-202ENST00000624887 GREB1LQ9C091 1923 aaPredicted RBP22.37■■□□□ 1.17
PCDHB11-202ENST00000624887 ZNF646O15015 1829 aaPredicted RBP22.37■■□□□ 1.17
PCDHB11-202ENST00000624887 ESYT2A0FGR8 921 aa22.37■■□□□ 1.17
PCDHB11-202ENST00000624887 ECE2O60344 883 aa22.37■■□□□ 1.17
PCDHB11-202ENST00000624887 ZNF18P17022 549 aa22.37■■□□□ 1.17
PCDHB11-202ENST00000624887 CHRNA5P30532 468 aa22.37■■□□□ 1.17
PCDHB11-202ENST00000624887 DTHD1Q6ZMT9 781 aa22.37■■□□□ 1.17
PCDHB11-202ENST00000624887 LRRC47Q8N1G4 583 aaKnown RBP22.37■■□□□ 1.17
PCDHB11-202ENST00000624887 DPF2Q92785 391 aa22.37■■□□□ 1.17
PCDHB11-202ENST00000624887 VAT1LQ9HCJ6 419 aa22.37■■□□□ 1.17
PCDHB11-202ENST00000624887 NFE2L3Q9Y4A8 694 aa22.37■■□□□ 1.17
PCDHB11-202ENST00000624887 TXLNAP40222 546 aa22.36■■□□□ 1.17
PCDHB11-202ENST00000624887 SOGA3Q5TF21 947 aa22.36■■□□□ 1.17
PCDHB11-202ENST00000624887 FRMPD2Q68DX3 1309 aaPredicted RBP22.36■■□□□ 1.17
PCDHB11-202ENST00000624887 UQCRHLA0A096LP55 91 aa22.36■■□□□ 1.17
PCDHB11-202ENST00000624887 UQCRHP07919 91 aa22.36■■□□□ 1.17
PCDHB11-202ENST00000624887 CASP1P29466 404 aa22.36■■□□□ 1.17
PCDHB11-202ENST00000624887 PRPHP41219 470 aa22.36■■□□□ 1.17
PCDHB11-202ENST00000624887 CFAP100Q494V2 611 aa22.36■■□□□ 1.17
PCDHB11-202ENST00000624887 KIAA0825Q8IV33 1275 aa22.36■■□□□ 1.17
PCDHB11-202ENST00000624887 MED15Q96RN5 788 aa22.36■■□□□ 1.17
PCDHB11-202ENST00000624887 TMEM60Q9H2L4 133 aa22.36■■□□□ 1.17
PCDHB11-202ENST00000624887 EIF6P56537 245 aaKnown RBP22.35■■□□□ 1.17
PCDHB11-202ENST00000624887 NONOQ15233 471 aaKnown RBP eCLIP22.35■■□□□ 1.17
PCDHB11-202ENST00000624887 ARMCX5Q6P1M9 558 aa22.35■■□□□ 1.17
PCDHB11-202ENST00000624887 C7orf43Q8WVR3 580 aa22.35■■□□□ 1.17
PCDHB11-202ENST00000624887 CLEC10AQ8IUN9 316 aa22.34■■□□□ 1.17
PCDHB11-202ENST00000624887 CCDC17Q96LX7 622 aa22.34■■□□□ 1.17
PCDHB11-202ENST00000624887 DHX36Q9H2U1 1008 aaKnown RBP22.34■■□□□ 1.17
PCDHB11-202ENST00000624887 ZNF543Q08ER8 600 aa22.34■■□□□ 1.17
PCDHB11-202ENST00000624887 ZFPM1Q8IX07 1006 aa22.34■■□□□ 1.17
PCDHB11-202ENST00000624887 TRMT44Q8IYL2 757 aaKnown RBP22.34■■□□□ 1.17
PCDHB11-202ENST00000624887 MTRQ99707 1265 aa22.34■■□□□ 1.17
PCDHB11-202ENST00000624887 IDI2Q9BXS1 227 aa22.34■■□□□ 1.17
PCDHB11-202ENST00000624887 GTPBP6O43824 516 aaPredicted RBP22.33■■□□□ 1.17
PCDHB11-202ENST00000624887 SFPQP23246 707 aaKnown RBP eCLIP22.33■■□□□ 1.17
PCDHB11-202ENST00000624887 CUL4BQ13620 913 aa22.33■■□□□ 1.17
PCDHB11-202ENST00000624887 PPP4R3BQ5MIZ7 849 aa22.33■■□□□ 1.17
PCDHB11-202ENST00000624887 VSTM4Q8IW00 320 aa22.33■■□□□ 1.17
PCDHB11-202ENST00000624887 MYRIPQ8NFW9 859 aa22.33■■□□□ 1.17
PCDHB11-202ENST00000624887 DISC1Q9NRI5 854 aa22.33■■□□□ 1.17
PCDHB11-202ENST00000624887 KCND1Q9NSA2 647 aa22.33■■□□□ 1.17
PCDHB11-202ENST00000624887 ZNF219Q9P2Y4 722 aaPredicted RBP22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms