RNA–Protein interactions for RNA: ENST00000613524.4

SYCP1-209, Transcript of synaptonemal complex protein 1, humanhuman

TSL 1 (best) BASIC

Gene SYCP1, Length 3,034 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-209ENST00000613524 NAPBQ9H115 298 aa5.88□□□□□ -1.47
SYCP1-209ENST00000613524 STX8Q9UNK0 236 aa5.88□□□□□ -1.47
SYCP1-209ENST00000613524 SCN4AP35499 1836 aa5.87□□□□□ -1.47
SYCP1-209ENST00000613524 GPR75-ASB3A0A0A6YYF3 556 aa5.87□□□□□ -1.47
SYCP1-209ENST00000613524 IGF2BP3O00425 579 aaKnown RBP eCLIP5.87□□□□□ -1.47
SYCP1-209ENST00000613524 NMT2O60551 498 aa5.87□□□□□ -1.47
SYCP1-209ENST00000613524 FMNL1O95466 1100 aaPredicted RBP5.87□□□□□ -1.47
SYCP1-209ENST00000613524 TAL1P17542 331 aaPredicted RBP5.87□□□□□ -1.47
SYCP1-209ENST00000613524 MPSTP25325 297 aa5.87□□□□□ -1.47
SYCP1-209ENST00000613524 ADD2P35612 726 aa5.87□□□□□ -1.47
SYCP1-209ENST00000613524 SEPT2Q15019 361 aa5.87□□□□□ -1.47
SYCP1-209ENST00000613524 DCAF15Q66K64 600 aa5.87□□□□□ -1.47
SYCP1-209ENST00000613524 TNS4Q8IZW8 715 aa5.87□□□□□ -1.47
SYCP1-209ENST00000613524 FAM43AQ8N2R8 423 aa5.87□□□□□ -1.47
SYCP1-209ENST00000613524 NKX2-3Q8TAU0 364 aa5.87□□□□□ -1.47
SYCP1-209ENST00000613524 PI4K2BQ8TCG2 481 aa5.87□□□□□ -1.47
SYCP1-209ENST00000613524 ACER1Q8TDN7 264 aa5.87□□□□□ -1.47
SYCP1-209ENST00000613524 TCEANC2Q96MN5 208 aa5.87□□□□□ -1.47
SYCP1-209ENST00000613524 WDR90Q96KV7 1748 aa5.87□□□□□ -1.47
SYCP1-209ENST00000613524 RNF113AO15541 343 aaKnown RBP5.87□□□□□ -1.47
SYCP1-209ENST00000613524 NOGQ13253 232 aa5.87□□□□□ -1.47
SYCP1-209ENST00000613524 AMOTL1Q8IY63 956 aa5.87□□□□□ -1.47
SYCP1-209ENST00000613524 LRRC47Q8N1G4 583 aaKnown RBP5.87□□□□□ -1.47
SYCP1-209ENST00000613524 KBTBD3Q8NAB2 608 aa5.87□□□□□ -1.47
SYCP1-209ENST00000613524 DUSP9Q99956 384 aaKnown RBP5.87□□□□□ -1.47
SYCP1-209ENST00000613524 IL25Q9H293 177 aa5.87□□□□□ -1.47
SYCP1-209ENST00000613524 RBM27Q9P2N5 1060 aaKnown RBP5.87□□□□□ -1.47
SYCP1-209ENST00000613524 FKBPLQ9UIM3 349 aa5.87□□□□□ -1.47
SYCP1-209ENST00000613524 PRUNE2Q8WUY3 3088 aa5.87□□□□□ -1.47
SYCP1-209ENST00000613524 BAZ2BQ9UIF8 2168 aaKnown RBP5.86□□□□□ -1.47
SYCP1-209ENST00000613524 SDSP20132 328 aa5.86□□□□□ -1.47
SYCP1-209ENST00000613524 NUCB1Q02818 461 aa5.86□□□□□ -1.47
SYCP1-209ENST00000613524 CERKLQ49MI3 558 aaPredicted RBP5.86□□□□□ -1.47
SYCP1-209ENST00000613524 WNK4Q96J92 1243 aa5.86□□□□□ -1.47
SYCP1-209ENST00000613524 TINF2Q9BSI4 451 aa5.86□□□□□ -1.47
SYCP1-209ENST00000613524 LRRC2Q9BYS8 371 aa5.86□□□□□ -1.47
SYCP1-209ENST00000613524 ARHGAP39Q9C0H5 1083 aa5.86□□□□□ -1.47
SYCP1-209ENST00000613524 ZSWIM4Q9H7M6 989 aa5.86□□□□□ -1.47
SYCP1-209ENST00000613524 DCP1AQ9NPI6 582 aaPredicted RBP5.86□□□□□ -1.47
SYCP1-209ENST00000613524 GPR108Q9NPR9 543 aa5.86□□□□□ -1.47
SYCP1-209ENST00000613524 HOMER2Q9NSB8 354 aa5.86□□□□□ -1.47
SYCP1-209ENST00000613524 SERPINB13Q9UIV8 391 aa5.86□□□□□ -1.47
SYCP1-209ENST00000613524 MRPL42Q9Y6G3 142 aaKnown RBP5.86□□□□□ -1.47
SYCP1-209ENST00000613524 DHX16O60231 1041 aaKnown RBP5.86□□□□□ -1.47
SYCP1-209ENST00000613524 AKR1B1P15121 316 aa5.86□□□□□ -1.47
SYCP1-209ENST00000613524 GSPT1P15170 499 aaKnown RBP5.86□□□□□ -1.47
SYCP1-209ENST00000613524 CRHR2Q13324 411 aa5.86□□□□□ -1.47
SYCP1-209ENST00000613524 MRPL58Q14197 206 aaKnown RBP5.86□□□□□ -1.47
SYCP1-209ENST00000613524 SPRYD7Q5W111 196 aa5.86□□□□□ -1.47
SYCP1-209ENST00000613524 ANKRD13CQ8N6S4 541 aa5.86□□□□□ -1.47
SYCP1-209ENST00000613524 PTPN18Q99952 460 aa5.86□□□□□ -1.47
SYCP1-209ENST00000613524 DNAJC18Q9H819 358 aa5.86□□□□□ -1.47
SYCP1-209ENST00000613524 PI4KBQ9UBF8 816 aa5.86□□□□□ -1.47
SYCP1-209ENST00000613524 SNCAIPQ9Y6H5 919 aa5.86□□□□□ -1.47
SYCP1-209ENST00000613524 BAZ2AQ9UIF9 1905 aaKnown RBP5.86□□□□□ -1.47
SYCP1-209ENST00000613524 EYSQ5T1H1 3165 aa5.85□□□□□ -1.47
SYCP1-209ENST00000613524 RASSF10A6NK89 507 aa5.85□□□□□ -1.47
SYCP1-209ENST00000613524 HDAC1Q13547 482 aaPredicted RBP5.85□□□□□ -1.47
SYCP1-209ENST00000613524 TREML2Q5T2D2 321 aa5.85□□□□□ -1.47
SYCP1-209ENST00000613524 JAZF1Q86VZ6 243 aa5.85□□□□□ -1.47
SYCP1-209ENST00000613524 CPXCR1Q8N123 301 aa5.85□□□□□ -1.47
SYCP1-209ENST00000613524 CD99L2Q8TCZ2 262 aa5.85□□□□□ -1.47
SYCP1-209ENST00000613524 BRI3BPQ8WY22 251 aa5.85□□□□□ -1.47
SYCP1-209ENST00000613524 ZBED3Q96IU2 234 aaPredicted RBP5.85□□□□□ -1.47
SYCP1-209ENST00000613524 CPVLQ9H3G5 476 aa5.85□□□□□ -1.47
SYCP1-209ENST00000613524 RNF186Q9NXI6 227 aa5.85□□□□□ -1.47
SYCP1-209ENST00000613524 CXXC1Q9P0U4 656 aaPredicted RBP5.85□□□□□ -1.47
SYCP1-209ENST00000613524 PARP2Q9UGN5 583 aa5.85□□□□□ -1.47
SYCP1-209ENST00000613524 TRIM17Q9Y577 477 aa5.85□□□□□ -1.47
SYCP1-209ENST00000613524 CDH23Q9H251 3354 aa5.85□□□□□ -1.47
SYCP1-209ENST00000613524 SSC5DA1L4H1 1573 aa5.85□□□□□ -1.47
SYCP1-209ENST00000613524 TSPY2A6NKD2 308 aa5.85□□□□□ -1.47
SYCP1-209ENST00000613524 ZBTB39O15060 712 aa5.85□□□□□ -1.47
SYCP1-209ENST00000613524 SOX10P56693 466 aa5.85□□□□□ -1.47
SYCP1-209ENST00000613524 ABCB5Q2M3G0 1257 aa5.85□□□□□ -1.47
SYCP1-209ENST00000613524 CCDC144CPQ8IYA2 1237 aa5.85□□□□□ -1.47
SYCP1-209ENST00000613524 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.85□□□□□ -1.47
SYCP1-209ENST00000613524 RIOK1Q9BRS2 568 aaKnown RBP5.85□□□□□ -1.47
SYCP1-209ENST00000613524 CABP5Q9NP86 173 aa5.85□□□□□ -1.47
SYCP1-209ENST00000613524 VCANP13611 3396 aa5.85□□□□□ -1.47
SYCP1-209ENST00000613524 BTBD19C9JJ37 291 aa5.85□□□□□ -1.47
SYCP1-209ENST00000613524 PDHXO00330 501 aa5.85□□□□□ -1.47
SYCP1-209ENST00000613524 FANCCQ00597 558 aa5.85□□□□□ -1.47
SYCP1-209ENST00000613524 MAP2K1Q02750 393 aaPredicted RBP5.85□□□□□ -1.47
SYCP1-209ENST00000613524 TCEAL1Q15170 157 aa5.85□□□□□ -1.47
SYCP1-209ENST00000613524 ANO1Q5XXA6 986 aa5.85□□□□□ -1.47
SYCP1-209ENST00000613524 TRAF7Q6Q0C0 670 aa5.85□□□□□ -1.47
SYCP1-209ENST00000613524 SMC5Q8IY18 1101 aa5.85□□□□□ -1.47
SYCP1-209ENST00000613524 ADAM32Q8TC27 787 aa5.85□□□□□ -1.47
SYCP1-209ENST00000613524 ZNF296Q8WUU4 475 aaPredicted RBP5.85□□□□□ -1.47
SYCP1-209ENST00000613524 ZNF592Q92610 1267 aa5.85□□□□□ -1.47
SYCP1-209ENST00000613524 APPBP2Q92624 585 aa5.85□□□□□ -1.47
SYCP1-209ENST00000613524 ASB16Q96NS5 453 aa5.85□□□□□ -1.47
SYCP1-209ENST00000613524 VAT1LQ9HCJ6 419 aa5.85□□□□□ -1.47
SYCP1-209ENST00000613524 EPB41L4AQ9HCS5 686 aaPredicted RBP5.85□□□□□ -1.47
SYCP1-209ENST00000613524 DNAAF2Q9NVR5 837 aaKnown RBP5.85□□□□□ -1.47
SYCP1-209ENST00000613524 PGAP2Q9UHJ9 254 aa5.85□□□□□ -1.47
SYCP1-209ENST00000613524 DDX49Q9Y6V7 483 aaKnown RBP5.85□□□□□ -1.47
SYCP1-209ENST00000613524 TRIOBPQ9H2D6 2365 aa5.84□□□□□ -1.47
SYCP1-209ENST00000613524 GAKO14976 1311 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms