RNA–Protein interactions for RNA: ENST00000593282.5

LINC01539-206, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 4 BASIC

Gene LINC01539, Length 678 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-206ENST00000593282 FAM221AA4D161 298 aa5.85□□□□□ -1.47
LINC01539-206ENST00000593282 SMAD7O15105 426 aaKnown RBP5.85□□□□□ -1.47
LINC01539-206ENST00000593282 SLITRK5O94991 958 aa5.85□□□□□ -1.47
LINC01539-206ENST00000593282 TSPAN15O95858 294 aa5.85□□□□□ -1.47
LINC01539-206ENST00000593282 CBX7O95931 251 aa5.85□□□□□ -1.47
LINC01539-206ENST00000593282 RING1Q06587 406 aa5.85□□□□□ -1.47
LINC01539-206ENST00000593282 TKFCQ3LXA3 575 aa5.85□□□□□ -1.47
LINC01539-206ENST00000593282 SEZ6Q53EL9 994 aa5.85□□□□□ -1.47
LINC01539-206ENST00000593282 SCARA3Q6AZY7 606 aa5.85□□□□□ -1.47
LINC01539-206ENST00000593282 CCSAPQ6IQ19 270 aaPredicted RBP5.85□□□□□ -1.47
LINC01539-206ENST00000593282 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.85□□□□□ -1.47
LINC01539-206ENST00000593282 PRR23BQ6ZRT6 265 aa5.85□□□□□ -1.47
LINC01539-206ENST00000593282 TSHZ1Q6ZSZ6 1077 aa5.85□□□□□ -1.47
LINC01539-206ENST00000593282 ANKLE2Q86XL3 938 aa5.85□□□□□ -1.47
LINC01539-206ENST00000593282 CELF2-AS1Q8N7Q2 184 aa5.85□□□□□ -1.47
LINC01539-206ENST00000593282 JMYQ8N9B5 988 aa5.85□□□□□ -1.47
LINC01539-206ENST00000593282 GATAD2BQ8WXI9 593 aa5.85□□□□□ -1.47
LINC01539-206ENST00000593282 EVI5LQ96CN4 794 aa5.85□□□□□ -1.47
LINC01539-206ENST00000593282 RPS6KC1Q96S38 1066 aa5.85□□□□□ -1.47
LINC01539-206ENST00000593282 BICRAQ9NZM4 1560 aa5.84□□□□□ -1.47
LINC01539-206ENST00000593282 PRR33A8MZF0 331 aa5.84□□□□□ -1.47
LINC01539-206ENST00000593282 NFIBO00712 420 aa5.84□□□□□ -1.47
LINC01539-206ENST00000593282 PDPK1O15530 556 aa5.84□□□□□ -1.47
LINC01539-206ENST00000593282 CDK8P49336 464 aa5.84□□□□□ -1.47
LINC01539-206ENST00000593282 DDR2Q16832 855 aa5.84□□□□□ -1.47
LINC01539-206ENST00000593282 C2orf27AQ580R0 203 aa5.84□□□□□ -1.47
LINC01539-206ENST00000593282 LRFN4Q6PJG9 635 aa5.84□□□□□ -1.47
LINC01539-206ENST00000593282 CCDC84Q86UT8 332 aaPredicted RBP5.84□□□□□ -1.47
LINC01539-206ENST00000593282 LRRC56Q8IYG6 542 aaPredicted RBP5.84□□□□□ -1.47
LINC01539-206ENST00000593282 MFSD2AQ8NA29 543 aa5.84□□□□□ -1.47
LINC01539-206ENST00000593282 PLPPR2Q96GM1 343 aa5.84□□□□□ -1.47
LINC01539-206ENST00000593282 DIRC2Q96SL1 478 aa5.84□□□□□ -1.47
LINC01539-206ENST00000593282 SRRTQ9BXP5 876 aaKnown RBP5.84□□□□□ -1.47
LINC01539-206ENST00000593282 TCEAL9Q9UHQ7 104 aa5.84□□□□□ -1.47
LINC01539-206ENST00000593282 ROBO2Q9HCK4 1378 aa5.83□□□□□ -1.48
LINC01539-206ENST00000593282 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.83□□□□□ -1.48
LINC01539-206ENST00000593282 PPFIA4O75335 1185 aa5.83□□□□□ -1.48
LINC01539-206ENST00000593282 CILPO75339 1184 aa5.83□□□□□ -1.48
LINC01539-206ENST00000593282 ZNF865P0CJ78 1059 aaPredicted RBP5.83□□□□□ -1.48
LINC01539-206ENST00000593282 RAC2P15153 192 aa5.83□□□□□ -1.48
LINC01539-206ENST00000593282 CYP7A1P22680 504 aa5.83□□□□□ -1.48
LINC01539-206ENST00000593282 MCM4P33991 863 aa5.83□□□□□ -1.48
LINC01539-206ENST00000593282 GDNFP39905 211 aa5.83□□□□□ -1.48
LINC01539-206ENST00000593282 CDKN1CP49918 316 aaPredicted RBP5.83□□□□□ -1.48
LINC01539-206ENST00000593282 UBE4AQ14139 1066 aa5.83□□□□□ -1.48
LINC01539-206ENST00000593282 MPP2Q14168 576 aa5.83□□□□□ -1.48
LINC01539-206ENST00000593282 INPP5AQ14642 412 aa5.83□□□□□ -1.48
LINC01539-206ENST00000593282 TCEA2Q15560 299 aa5.83□□□□□ -1.48
LINC01539-206ENST00000593282 C4orf46Q504U0 113 aa5.83□□□□□ -1.48
LINC01539-206ENST00000593282 HSP90AB4PQ58FF6 505 aa5.83□□□□□ -1.48
LINC01539-206ENST00000593282 DALRD3Q5D0E6 543 aaKnown RBP5.83□□□□□ -1.48
LINC01539-206ENST00000593282 WIPI1Q5MNZ9 446 aaPredicted RBP5.83□□□□□ -1.48
LINC01539-206ENST00000593282 CCDC81Q6ZN84 652 aa5.83□□□□□ -1.48
LINC01539-206ENST00000593282 SLITRK4Q8IW52 837 aa5.83□□□□□ -1.48
LINC01539-206ENST00000593282 SYNPOQ8N3V7 929 aa5.83□□□□□ -1.48
LINC01539-206ENST00000593282 FBXO15Q8NCQ5 510 aaPredicted RBP5.83□□□□□ -1.48
LINC01539-206ENST00000593282 XAGE3Q8WTP9 111 aa5.83□□□□□ -1.48
LINC01539-206ENST00000593282 THAP3Q8WTV1 239 aaPredicted RBP5.83□□□□□ -1.48
LINC01539-206ENST00000593282 NSUN3Q9H649 340 aaKnown RBP5.83□□□□□ -1.48
LINC01539-206ENST00000593282 FBRSQ9HAH7 460 aa5.83□□□□□ -1.48
LINC01539-206ENST00000593282 SEMA3GQ9NS98 782 aa5.83□□□□□ -1.48
LINC01539-206ENST00000593282 HMGB1P1B2RPK0 211 aaPredicted RBP5.82□□□□□ -1.48
LINC01539-206ENST00000593282 KIF3BO15066 747 aa5.82□□□□□ -1.48
LINC01539-206ENST00000593282 KCNQ2O43526 872 aa5.82□□□□□ -1.48
LINC01539-206ENST00000593282 POU3F3P20264 500 aaPredicted RBP5.82□□□□□ -1.48
LINC01539-206ENST00000593282 CFPP27918 469 aa5.82□□□□□ -1.48
LINC01539-206ENST00000593282 RPL6Q02878 288 aaKnown RBP5.82□□□□□ -1.48
LINC01539-206ENST00000593282 MAP9Q49MG5 647 aa5.82□□□□□ -1.48
LINC01539-206ENST00000593282 BRDTQ58F21 947 aaPredicted RBP5.82□□□□□ -1.48
LINC01539-206ENST00000593282 LCE4AQ5TA78 99 aa5.82□□□□□ -1.48
LINC01539-206ENST00000593282 LETMD1Q6P1Q0 360 aa5.82□□□□□ -1.48
LINC01539-206ENST00000593282 C22orf34Q6ZV56 151 aa5.82□□□□□ -1.48
LINC01539-206ENST00000593282 JAMLQ86YT9 394 aa5.82□□□□□ -1.48
LINC01539-206ENST00000593282 HID1Q8IV36 788 aa5.82□□□□□ -1.48
LINC01539-206ENST00000593282 RAVER1Q8IY67 606 aaKnown RBP5.82□□□□□ -1.48
LINC01539-206ENST00000593282 ALPK1Q96QP1 1244 aa5.82□□□□□ -1.48
LINC01539-206ENST00000593282 LRRC3Q9BY71 257 aa5.82□□□□□ -1.48
LINC01539-206ENST00000593282 KRTAP4-9Q9BYQ8 210 aa5.82□□□□□ -1.48
LINC01539-206ENST00000593282 WNT10AQ9GZT5 417 aa5.82□□□□□ -1.48
LINC01539-206ENST00000593282 BRMS1Q9HCU9 246 aa5.82□□□□□ -1.48
LINC01539-206ENST00000593282 SLAMF8Q9P0V8 285 aa5.82□□□□□ -1.48
LINC01539-206ENST00000593282 ZSWIM5Q9P217 1185 aa5.82□□□□□ -1.48
LINC01539-206ENST00000593282 PPT2Q9UMR5 302 aa5.82□□□□□ -1.48
LINC01539-206ENST00000593282 PLAAQ9Y263 795 aa5.82□□□□□ -1.48
LINC01539-206ENST00000593282 ATP8A1Q9Y2Q0 1164 aa5.82□□□□□ -1.48
LINC01539-206ENST00000593282 NACADO15069 1562 aa5.81□□□□□ -1.48
LINC01539-206ENST00000593282 GRIN3BO60391 1043 aa5.81□□□□□ -1.48
LINC01539-206ENST00000593282 BPNT1O95861 308 aa5.81□□□□□ -1.48
LINC01539-206ENST00000593282 TMEM253P0C7T8 217 aa5.81□□□□□ -1.48
LINC01539-206ENST00000593282 GNALP38405 381 aa5.81□□□□□ -1.48
LINC01539-206ENST00000593282 IRX6P78412 446 aaPredicted RBP5.81□□□□□ -1.48
LINC01539-206ENST00000593282 SLBPQ14493 270 aaKnown RBP eCLIP5.81□□□□□ -1.48
LINC01539-206ENST00000593282 NKG7Q16617 165 aa5.81□□□□□ -1.48
LINC01539-206ENST00000593282 NFE2Q16621 373 aaPredicted RBP5.81□□□□□ -1.48
LINC01539-206ENST00000593282 CWF19L2Q2TBE0 894 aaKnown RBP5.81□□□□□ -1.48
LINC01539-206ENST00000593282 GK5Q6ZS86 529 aa5.81□□□□□ -1.48
LINC01539-206ENST00000593282 REC114Q7Z4M0 266 aa5.81□□□□□ -1.48
LINC01539-206ENST00000593282 THAP5Q7Z6K1 395 aa5.81□□□□□ -1.48
LINC01539-206ENST00000593282 FAM169BQ8N8A8 192 aa5.81□□□□□ -1.48
LINC01539-206ENST00000593282 TSR2Q969E8 191 aaKnown RBP5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms