RNA–Protein interactions for RNA: ENST00000592194.1

PRKAR1A-220, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, humanhuman

TSL 2

Gene PRKAR1A, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAR1A-220ENST00000592194 MAML3Q96JK9 1138 aa16.23■□□□□ 0.19
PRKAR1A-220ENST00000592194 EPB41L4AQ9HCS5 686 aaPredicted RBP16.23■□□□□ 0.19
PRKAR1A-220ENST00000592194 NYAP2Q9P242 653 aa16.23■□□□□ 0.19
PRKAR1A-220ENST00000592194 PPP1R9AQ9ULJ8 1098 aa16.23■□□□□ 0.19
PRKAR1A-220ENST00000592194 IGKV6D-41A0A0C4DH26 115 aa16.22■□□□□ 0.19
PRKAR1A-220ENST00000592194 MINDY4BA8MYZ0 360 aa16.22■□□□□ 0.19
PRKAR1A-220ENST00000592194 PATL2C9JE40 543 aaKnown RBP16.22■□□□□ 0.19
PRKAR1A-220ENST00000592194 SEPT4O43236 478 aa16.22■□□□□ 0.19
PRKAR1A-220ENST00000592194 FCER1AP12319 257 aa16.22■□□□□ 0.19
PRKAR1A-220ENST00000592194 STAT3P40763 770 aa16.22■□□□□ 0.19
PRKAR1A-220ENST00000592194 LRIT3Q3SXY7 679 aa16.22■□□□□ 0.19
PRKAR1A-220ENST00000592194 FAM83BQ5T0W9 1011 aa16.22■□□□□ 0.19
PRKAR1A-220ENST00000592194 GJC2Q5T442 439 aaPredicted RBP16.22■□□□□ 0.19
PRKAR1A-220ENST00000592194 VPS53Q5VIR6 699 aa16.22■□□□□ 0.19
PRKAR1A-220ENST00000592194 STK11IPQ8N1F8 1099 aa16.22■□□□□ 0.19
PRKAR1A-220ENST00000592194 GOPCQ9HD26 462 aa16.22■□□□□ 0.19
PRKAR1A-220ENST00000592194 SLC5A4Q9NY91 659 aa16.22■□□□□ 0.19
PRKAR1A-220ENST00000592194 ZNF214Q9UL59 606 aaPredicted RBP16.22■□□□□ 0.19
PRKAR1A-220ENST00000592194 F5H6K3 240 aa16.21■□□□□ 0.19
PRKAR1A-220ENST00000592194 KLRC3Q07444 240 aa16.21■□□□□ 0.19
PRKAR1A-220ENST00000592194 ZNF792Q3KQV3 632 aa16.21■□□□□ 0.19
PRKAR1A-220ENST00000592194 ANO1Q5XXA6 986 aa16.21■□□□□ 0.19
PRKAR1A-220ENST00000592194 TDHQ8IZJ6 230 aa16.21■□□□□ 0.19
PRKAR1A-220ENST00000592194 ARRDC4Q8NCT1 418 aa16.21■□□□□ 0.19
PRKAR1A-220ENST00000592194 MKL1Q969V6 931 aa16.21■□□□□ 0.19
PRKAR1A-220ENST00000592194 MKNK2Q9HBH9 465 aa16.21■□□□□ 0.19
PRKAR1A-220ENST00000592194 DIS3Q9Y2L1 958 aaKnown RBP16.21■□□□□ 0.19
PRKAR1A-220ENST00000592194 ROBO3Q96MS0 1386 aa16.21■□□□□ 0.19
PRKAR1A-220ENST00000592194 COL6A3P12111 3177 aa16.2■□□□□ 0.18
PRKAR1A-220ENST00000592194 ATN1P54259 1190 aaPredicted RBP16.2■□□□□ 0.18
PRKAR1A-220ENST00000592194 MDM2Q00987 491 aaPredicted RBP16.2■□□□□ 0.18
PRKAR1A-220ENST00000592194 GPR153Q6NV75 609 aa16.2■□□□□ 0.18
PRKAR1A-220ENST00000592194 IFNL3Q8IZI9 196 aa16.2■□□□□ 0.18
PRKAR1A-220ENST00000592194 NUP88Q99567 741 aaPredicted RBP16.2■□□□□ 0.18
PRKAR1A-220ENST00000592194 UBE2OQ9C0C9 1292 aaKnown RBP16.2■□□□□ 0.18
PRKAR1A-220ENST00000592194 NDUFB10O96000 172 aa16.19■□□□□ 0.18
PRKAR1A-220ENST00000592194 PGK2P07205 417 aa16.19■□□□□ 0.18
PRKAR1A-220ENST00000592194 GNAT2P19087 354 aa16.19■□□□□ 0.18
PRKAR1A-220ENST00000592194 CWC27Q6UX04 472 aaKnown RBP16.19■□□□□ 0.18
PRKAR1A-220ENST00000592194 SLC39A5Q6ZMH5 540 aa16.19■□□□□ 0.18
PRKAR1A-220ENST00000592194 ZNF444Q8N0Y2 327 aaPredicted RBP16.19■□□□□ 0.18
PRKAR1A-220ENST00000592194 MMP19Q99542 508 aa16.19■□□□□ 0.18
PRKAR1A-220ENST00000592194 CLIP2Q9UDT6 1046 aa16.19■□□□□ 0.18
PRKAR1A-220ENST00000592194 NRBP1Q9UHY1 535 aa16.19■□□□□ 0.18
PRKAR1A-220ENST00000592194 RIPK3Q9Y572 518 aa16.19■□□□□ 0.18
PRKAR1A-220ENST00000592194 RAD21O60216 631 aa16.18■□□□□ 0.18
PRKAR1A-220ENST00000592194 PRDM1O75626 825 aa16.18■□□□□ 0.18
PRKAR1A-220ENST00000592194 CHMLP26374 656 aa16.18■□□□□ 0.18
PRKAR1A-220ENST00000592194 RTP1P59025 263 aa16.18■□□□□ 0.18
PRKAR1A-220ENST00000592194 LRRC41Q15345 812 aa16.18■□□□□ 0.18
PRKAR1A-220ENST00000592194 LRRFIP1Q32MZ4 808 aaKnown RBP16.18■□□□□ 0.18
PRKAR1A-220ENST00000592194 PRPF38AQ8NAV1 312 aaKnown RBP16.18■□□□□ 0.18
PRKAR1A-220ENST00000592194 SLF1Q9BQI6 1058 aa16.18■□□□□ 0.18
PRKAR1A-220ENST00000592194 TINF2Q9BSI4 451 aa16.18■□□□□ 0.18
PRKAR1A-220ENST00000592194 HELLSQ9NRZ9 838 aa16.18■□□□□ 0.18
PRKAR1A-220ENST00000592194 DIAPH3Q9NSV4 1193 aa16.18■□□□□ 0.18
PRKAR1A-220ENST00000592194 MTMR4Q9NYA4 1195 aa16.18■□□□□ 0.18
PRKAR1A-220ENST00000592194 APPP05067 770 aa16.17■□□□□ 0.18
PRKAR1A-220ENST00000592194 ZNF865P0CJ78 1059 aaPredicted RBP16.17■□□□□ 0.18
PRKAR1A-220ENST00000592194 TAL1P17542 331 aaPredicted RBP16.17■□□□□ 0.18
PRKAR1A-220ENST00000592194 SNX17Q15036 470 aa16.17■□□□□ 0.18
PRKAR1A-220ENST00000592194 MCMDC2Q4G0Z9 681 aa16.17■□□□□ 0.18
PRKAR1A-220ENST00000592194 BMP2KLQ5H9B9 411 aa16.17■□□□□ 0.18
PRKAR1A-220ENST00000592194 CCDC171Q6TFL3 1326 aa16.17■□□□□ 0.18
PRKAR1A-220ENST00000592194 MCM3APO60318 1980 aa16.17■□□□□ 0.18
PRKAR1A-220ENST00000592194 DNAJC25-GNG10A0A024R161 153 aa16.16■□□□□ 0.18
PRKAR1A-220ENST00000592194 ATP2A1O14983 1001 aa16.16■□□□□ 0.18
PRKAR1A-220ENST00000592194 COPB2P35606 906 aa16.16■□□□□ 0.18
PRKAR1A-220ENST00000592194 ADCYAP1R1P41586 468 aa16.16■□□□□ 0.18
PRKAR1A-220ENST00000592194 TDO2P48775 406 aa16.16■□□□□ 0.18
PRKAR1A-220ENST00000592194 KCTD2Q14681 263 aa16.16■□□□□ 0.18
PRKAR1A-220ENST00000592194 FAM47AQ5JRC9 791 aa16.16■□□□□ 0.18
PRKAR1A-220ENST00000592194 NEDD1Q8NHV4 660 aa16.16■□□□□ 0.18
PRKAR1A-220ENST00000592194 CEP95Q96GE4 821 aa16.16■□□□□ 0.18
PRKAR1A-220ENST00000592194 TSPYL2Q9H2G4 693 aaPredicted RBP16.16■□□□□ 0.18
PRKAR1A-220ENST00000592194 KBTBD13C9JR72 458 aa16.15■□□□□ 0.18
PRKAR1A-220ENST00000592194 SNAI1O95863 264 aaPredicted RBP16.15■□□□□ 0.18
PRKAR1A-220ENST00000592194 C1orf53Q5VUE5 145 aa16.15■□□□□ 0.18
PRKAR1A-220ENST00000592194 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.15■□□□□ 0.18
PRKAR1A-220ENST00000592194 ZNF287Q9HBT7 754 aa16.15■□□□□ 0.18
PRKAR1A-220ENST00000592194 GTF3C3Q9Y5Q9 886 aa16.15■□□□□ 0.18
PRKAR1A-220ENST00000592194 LTBP2Q14767 1821 aa16.15■□□□□ 0.18
PRKAR1A-220ENST00000592194 LAMA2P24043 3122 aaKnown RBP16.14■□□□□ 0.17
PRKAR1A-220ENST00000592194 TTLL1O95922 423 aa16.14■□□□□ 0.17
PRKAR1A-220ENST00000592194 SNRNP48Q6IEG0 339 aaKnown RBP16.14■□□□□ 0.17
PRKAR1A-220ENST00000592194 MAMDC4Q6UXC1 1216 aa16.14■□□□□ 0.17
PRKAR1A-220ENST00000592194 Q7L0L9 218 aa16.14■□□□□ 0.17
PRKAR1A-220ENST00000592194 MSL3Q8N5Y2 521 aaKnown RBP16.14■□□□□ 0.17
PRKAR1A-220ENST00000592194 ZNF579Q8NAF0 562 aaKnown RBP16.14■□□□□ 0.17
PRKAR1A-220ENST00000592194 FERMT2Q96AC1 680 aa16.14■□□□□ 0.17
PRKAR1A-220ENST00000592194 TEX13BQ9BXU2 312 aa16.14■□□□□ 0.17
PRKAR1A-220ENST00000592194 SLC38A10Q9HBR0 1119 aa16.14■□□□□ 0.17
PRKAR1A-220ENST00000592194 MTMR10Q9NXD2 777 aa16.14■□□□□ 0.17
PRKAR1A-220ENST00000592194 SYNPO2Q9UMS6 1093 aa16.14■□□□□ 0.17
PRKAR1A-220ENST00000592194 PHF24Q9UPV7 400 aa16.14■□□□□ 0.17
PRKAR1A-220ENST00000592194 ATP11BQ9Y2G3 1177 aa16.14■□□□□ 0.17
PRKAR1A-220ENST00000592194 TACC3Q9Y6A5 838 aa16.14■□□□□ 0.17
PRKAR1A-220ENST00000592194 PLIN4Q96Q06 1357 aa16.13■□□□□ 0.17
PRKAR1A-220ENST00000592194 ZBED4O75132 1171 aa16.13■□□□□ 0.17
PRKAR1A-220ENST00000592194 GABBR2O75899 941 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms