RNA–Protein interactions for RNA: ENST00000588642.1

NLE1-205, Transcript of notchless homolog 1, humanhuman

TSL 2

Gene NLE1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-205ENST00000588642 SCG2P13521 617 aa16.23■□□□□ 0.19
NLE1-205ENST00000588642 XBP1P17861 261 aa16.23■□□□□ 0.19
NLE1-205ENST00000588642 VCAM1P19320 739 aa16.23■□□□□ 0.19
NLE1-205ENST00000588642 STAT2P52630 851 aa16.23■□□□□ 0.19
NLE1-205ENST00000588642 GUCY1B3Q02153 619 aa16.23■□□□□ 0.19
NLE1-205ENST00000588642 PKP1Q13835 747 aa16.23■□□□□ 0.19
NLE1-205ENST00000588642 PFKFB3Q16875 520 aaPredicted RBP16.23■□□□□ 0.19
NLE1-205ENST00000588642 SH3D19Q5HYK7 790 aa16.23■□□□□ 0.19
NLE1-205ENST00000588642 OTUD7BQ6GQQ9 843 aa16.23■□□□□ 0.19
NLE1-205ENST00000588642 FAM160B2Q86V87 743 aa16.23■□□□□ 0.19
NLE1-205ENST00000588642 C12orf42Q96LP6 360 aa16.23■□□□□ 0.19
NLE1-205ENST00000588642 TANGO6Q9C0B7 1094 aa16.23■□□□□ 0.19
NLE1-205ENST00000588642 RPAP3Q9H6T3 665 aaPredicted RBP16.23■□□□□ 0.19
NLE1-205ENST00000588642 PNMA6FA0A0J9YX94 578 aa16.22■□□□□ 0.19
NLE1-205ENST00000588642 PLA2G6O60733 806 aa16.22■□□□□ 0.19
NLE1-205ENST00000588642 TOMM70O94826 608 aa16.22■□□□□ 0.19
NLE1-205ENST00000588642 BRD1O95696 1058 aa16.22■□□□□ 0.19
NLE1-205ENST00000588642 ZSCAN22P10073 491 aaPredicted RBP16.22■□□□□ 0.19
NLE1-205ENST00000588642 HUNKP57058 714 aa16.22■□□□□ 0.19
NLE1-205ENST00000588642 HEATR3Q7Z4Q2 680 aa16.22■□□□□ 0.19
NLE1-205ENST00000588642 FBXO18Q8NFZ0 1043 aa16.22■□□□□ 0.19
NLE1-205ENST00000588642 KIFC2Q96AC6 838 aa16.22■□□□□ 0.19
NLE1-205ENST00000588642 GJB4Q9NTQ9 266 aa16.22■□□□□ 0.19
NLE1-205ENST00000588642 PRR12Q9ULL5 1215 aa16.22■□□□□ 0.19
NLE1-205ENST00000588642 MTMR6Q9Y217 621 aa16.22■□□□□ 0.19
NLE1-205ENST00000588642 KRT40Q6A162 431 aa16.21■□□□□ 0.19
NLE1-205ENST00000588642 MCTP1Q6DN14 999 aa16.21■□□□□ 0.19
NLE1-205ENST00000588642 GADL1Q6ZQY3 521 aa16.21■□□□□ 0.19
NLE1-205ENST00000588642 ZNF784Q8NCA9 323 aaPredicted RBP16.21■□□□□ 0.19
NLE1-205ENST00000588642 FBXO28Q9NVF7 368 aa16.21■□□□□ 0.19
NLE1-205ENST00000588642 VPS54Q9P1Q0 977 aa16.21■□□□□ 0.19
NLE1-205ENST00000588642 KCNH4Q9UQ05 1017 aa16.21■□□□□ 0.19
NLE1-205ENST00000588642 ZDHHC9Q9Y397 364 aa16.21■□□□□ 0.19
NLE1-205ENST00000588642 PASKQ96RG2 1323 aa16.2■□□□□ 0.18
NLE1-205ENST00000588642 USP17L15C9J2P7 530 aa16.2■□□□□ 0.18
NLE1-205ENST00000588642 USP17L13C9JLJ4 530 aa16.2■□□□□ 0.18
NLE1-205ENST00000588642 USP17L11C9JVI0 530 aa16.2■□□□□ 0.18
NLE1-205ENST00000588642 USP17L18D6R9N7 530 aa16.2■□□□□ 0.18
NLE1-205ENST00000588642 USP17L22D6RA61 530 aa16.2■□□□□ 0.18
NLE1-205ENST00000588642 USP17L17D6RBQ6 530 aa16.2■□□□□ 0.18
NLE1-205ENST00000588642 USP17L19D6RCP7 530 aa16.2■□□□□ 0.18
NLE1-205ENST00000588642 USP17L20D6RJB6 530 aa16.2■□□□□ 0.18
NLE1-205ENST00000588642 ZBTB5O15062 677 aa16.2■□□□□ 0.18
NLE1-205ENST00000588642 FLOT1O75955 427 aa16.2■□□□□ 0.18
NLE1-205ENST00000588642 GJA5P36382 358 aa16.2■□□□□ 0.18
NLE1-205ENST00000588642 SNAP25P60880 206 aa16.2■□□□□ 0.18
NLE1-205ENST00000588642 USP17L24Q0WX57 530 aa16.2■□□□□ 0.18
NLE1-205ENST00000588642 SNAPC2Q13487 334 aa16.2■□□□□ 0.18
NLE1-205ENST00000588642 SAFBQ15424 915 aaKnown RBP eCLIP16.2■□□□□ 0.18
NLE1-205ENST00000588642 CDC37Q16543 378 aaPredicted RBP16.2■□□□□ 0.18
NLE1-205ENST00000588642 PRPF38AQ8NAV1 312 aaKnown RBP16.2■□□□□ 0.18
NLE1-205ENST00000588642 GPKOWQ92917 476 aaPredicted RBP eCLIP16.2■□□□□ 0.18
NLE1-205ENST00000588642 MTMR8Q96EF0 704 aa16.2■□□□□ 0.18
NLE1-205ENST00000588642 WNK4Q96J92 1243 aa16.2■□□□□ 0.18
NLE1-205ENST00000588642 SLF1Q9BQI6 1058 aa16.2■□□□□ 0.18
NLE1-205ENST00000588642 KCNJ14Q9UNX9 436 aa16.2■□□□□ 0.18
NLE1-205ENST00000588642 DOCK1Q14185 1865 aa16.2■□□□□ 0.18
NLE1-205ENST00000588642 PAPPA2Q9BXP8 1791 aa16.19■□□□□ 0.18
NLE1-205ENST00000588642 A0A0G2JLL6 359 aaPredicted RBP16.19■□□□□ 0.18
NLE1-205ENST00000588642 NLRP5P59047 1200 aa16.19■□□□□ 0.18
NLE1-205ENST00000588642 QRICH1Q2TAL8 776 aa16.19■□□□□ 0.18
NLE1-205ENST00000588642 WWC2Q6AWC2 1192 aa16.19■□□□□ 0.18
NLE1-205ENST00000588642 FASTKD5Q7L8L6 764 aaKnown RBP16.19■□□□□ 0.18
NLE1-205ENST00000588642 PRRT2Q7Z6L0 340 aaPredicted RBP16.19■□□□□ 0.18
NLE1-205ENST00000588642 FERMT3Q86UX7 667 aa16.19■□□□□ 0.18
NLE1-205ENST00000588642 PROCA1Q8NCQ7 364 aaPredicted RBP16.19■□□□□ 0.18
NLE1-205ENST00000588642 RGS22Q8NE09 1264 aa16.19■□□□□ 0.18
NLE1-205ENST00000588642 SH3GLB2Q9NR46 395 aa16.19■□□□□ 0.18
NLE1-205ENST00000588642 BARHL2Q9NY43 387 aa16.19■□□□□ 0.18
NLE1-205ENST00000588642 CTDP1Q9Y5B0 961 aaPredicted RBP16.19■□□□□ 0.18
NLE1-205ENST00000588642 GTF2A2P52657 109 aa16.18■□□□□ 0.18
NLE1-205ENST00000588642 NAPAP54920 295 aa16.18■□□□□ 0.18
NLE1-205ENST00000588642 FSTL1Q12841 308 aa16.18■□□□□ 0.18
NLE1-205ENST00000588642 MKRN3Q13064 507 aaKnown RBP16.18■□□□□ 0.18
NLE1-205ENST00000588642 GNL2Q13823 731 aaKnown RBP16.18■□□□□ 0.18
NLE1-205ENST00000588642 CATSPERGQ6ZRH7 1159 aa16.18■□□□□ 0.18
NLE1-205ENST00000588642 FBXO11Q86XK2 927 aa16.18■□□□□ 0.18
NLE1-205ENST00000588642 CCDC12Q8WUD4 166 aaPredicted RBP16.18■□□□□ 0.18
NLE1-205ENST00000588642 PPP1R9AQ9ULJ8 1098 aa16.18■□□□□ 0.18
NLE1-205ENST00000588642 MYH4Q9Y623 1939 aa16.17■□□□□ 0.18
NLE1-205ENST00000588642 hCG_1984214I3L0E3 225 aa16.17■□□□□ 0.18
NLE1-205ENST00000588642 STXBP3O00186 592 aa16.17■□□□□ 0.18
NLE1-205ENST00000588642 ZBED4O75132 1171 aa16.17■□□□□ 0.18
NLE1-205ENST00000588642 F13A1P00488 732 aa16.17■□□□□ 0.18
NLE1-205ENST00000588642 MMP1P03956 469 aa16.17■□□□□ 0.18
NLE1-205ENST00000588642 CALML3P27482 149 aa16.17■□□□□ 0.18
NLE1-205ENST00000588642 ZNF157P51786 506 aaPredicted RBP16.17■□□□□ 0.18
NLE1-205ENST00000588642 COG2Q14746 738 aa16.17■□□□□ 0.18
NLE1-205ENST00000588642 TREML2Q5T2D2 321 aa16.17■□□□□ 0.18
NLE1-205ENST00000588642 SPRYD7Q5W111 196 aa16.17■□□□□ 0.18
NLE1-205ENST00000588642 CCDC174Q6PII3 467 aa16.17■□□□□ 0.18
NLE1-205ENST00000588642 ZNF713Q8N859 430 aaPredicted RBP16.17■□□□□ 0.18
NLE1-205ENST00000588642 CCDC148Q8NFR7 591 aa16.17■□□□□ 0.18
NLE1-205ENST00000588642 COA7Q96BR5 231 aa16.17■□□□□ 0.18
NLE1-205ENST00000588642 PHF20Q9BVI0 1012 aa16.17■□□□□ 0.18
NLE1-205ENST00000588642 AMNQ9BXJ7 453 aa16.17■□□□□ 0.18
NLE1-205ENST00000588642 BRMS1Q9HCU9 246 aa16.17■□□□□ 0.18
NLE1-205ENST00000588642 HOXC10Q9NYD6 342 aa16.17■□□□□ 0.18
NLE1-205ENST00000588642 PCDHA1Q9Y5I3 950 aa16.17■□□□□ 0.18
NLE1-205ENST00000588642 ATAD5Q96QE3 1844 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms