RNA–Protein interactions for RNA: ENST00000585900.1

HMG20B-216, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 741 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-216ENST00000585900 TOMM22Q9NS69 142 aa21.53■■□□□ 1.04
HMG20B-216ENST00000585900 ANAPC4Q9UJX5 808 aa21.53■■□□□ 1.04
HMG20B-216ENST00000585900 COL11A1P12107 1806 aaPredicted RBP21.52■■□□□ 1.04
HMG20B-216ENST00000585900 TRIOBPQ9H2D6 2365 aa21.52■■□□□ 1.04
HMG20B-216ENST00000585900 DNM1LO00429 736 aa21.52■■□□□ 1.04
HMG20B-216ENST00000585900 RANBP6O60518 1105 aaKnown RBP21.52■■□□□ 1.04
HMG20B-216ENST00000585900 PGK2P07205 417 aa21.52■■□□□ 1.04
HMG20B-216ENST00000585900 SLC1A4P43007 532 aa21.52■■□□□ 1.04
HMG20B-216ENST00000585900 SLC4A3P48751 1232 aa21.52■■□□□ 1.04
HMG20B-216ENST00000585900 NMIQ13287 307 aaPredicted RBP21.52■■□□□ 1.04
HMG20B-216ENST00000585900 CPXCR1Q8N123 301 aa21.52■■□□□ 1.04
HMG20B-216ENST00000585900 ARRDC4Q8NCT1 418 aa21.52■■□□□ 1.04
HMG20B-216ENST00000585900 NRBP1Q9UHY1 535 aa21.52■■□□□ 1.04
HMG20B-216ENST00000585900 DIS3Q9Y2L1 958 aaKnown RBP21.52■■□□□ 1.04
HMG20B-216ENST00000585900 CCDC171Q6TFL3 1326 aa21.52■■□□□ 1.03
HMG20B-216ENST00000585900 ATP2A1O14983 1001 aa21.51■■□□□ 1.03
HMG20B-216ENST00000585900 IGHDP01880 384 aa21.51■■□□□ 1.03
HMG20B-216ENST00000585900 FDX1P10109 184 aa21.51■■□□□ 1.03
HMG20B-216ENST00000585900 STAT2P52630 851 aa21.51■■□□□ 1.03
HMG20B-216ENST00000585900 DDX11Q96FC9 970 aa21.51■■□□□ 1.03
HMG20B-216ENST00000585900 GMCL1Q96IK5 515 aa21.51■■□□□ 1.03
HMG20B-216ENST00000585900 SLC38A10Q9HBR0 1119 aa21.51■■□□□ 1.03
HMG20B-216ENST00000585900 FBXO40Q9UH90 709 aa21.51■■□□□ 1.03
HMG20B-216ENST00000585900 ZMYND8Q9ULU4 1186 aaPredicted RBP21.51■■□□□ 1.03
HMG20B-216ENST00000585900 ZMYM6O95789 1325 aa21.51■■□□□ 1.03
HMG20B-216ENST00000585900 FRMPD3Q5JV73 1810 aa21.5■■□□□ 1.03
HMG20B-216ENST00000585900 A0A1W2PPC1 479 aa21.5■■□□□ 1.03
HMG20B-216ENST00000585900 TMEM232C9JQI7 657 aa21.5■■□□□ 1.03
HMG20B-216ENST00000585900 KBTBD13C9JR72 458 aa21.5■■□□□ 1.03
HMG20B-216ENST00000585900 ORC4O43929 436 aa21.5■■□□□ 1.03
HMG20B-216ENST00000585900 OAZ1P54368 228 aa21.5■■□□□ 1.03
HMG20B-216ENST00000585900 ZNF792Q3KQV3 632 aa21.5■■□□□ 1.03
HMG20B-216ENST00000585900 FAM160B2Q86V87 743 aa21.5■■□□□ 1.03
HMG20B-216ENST00000585900 PLEKHM2Q8IWE5 1019 aa21.5■■□□□ 1.03
HMG20B-216ENST00000585900 CHURC1Q8WUH1 139 aa21.5■■□□□ 1.03
HMG20B-216ENST00000585900 TINF2Q9BSI4 451 aa21.5■■□□□ 1.03
HMG20B-216ENST00000585900 SENP6Q9GZR1 1112 aaPredicted RBP21.5■■□□□ 1.03
HMG20B-216ENST00000585900 OSBPL3Q9H4L5 887 aa21.5■■□□□ 1.03
HMG20B-216ENST00000585900 RAVER2Q9HCJ3 691 aaKnown RBP21.5■■□□□ 1.03
HMG20B-216ENST00000585900 ALPK3Q96L96 1907 aa21.49■■□□□ 1.03
HMG20B-216ENST00000585900 FGAP02671 866 aa21.49■■□□□ 1.03
HMG20B-216ENST00000585900 MYCNP04198 464 aaPredicted RBP21.49■■□□□ 1.03
HMG20B-216ENST00000585900 HSPD1P10809 573 aaKnown RBP21.49■■□□□ 1.03
HMG20B-216ENST00000585900 ZNF589Q86UQ0 364 aaPredicted RBP21.49■■□□□ 1.03
HMG20B-216ENST00000585900 DIAPH3Q9NSV4 1193 aa21.49■■□□□ 1.03
HMG20B-216ENST00000585900 PCDH10Q9P2E7 1040 aa21.49■■□□□ 1.03
HMG20B-216ENST00000585900 CNPY2Q9Y2B0 182 aa21.49■■□□□ 1.03
HMG20B-216ENST00000585900 SUPT16HQ9Y5B9 1047 aaKnown RBP21.49■■□□□ 1.03
HMG20B-216ENST00000585900 HIP1O00291 1037 aa21.48■■□□□ 1.03
HMG20B-216ENST00000585900 SDSP20132 328 aa21.48■■□□□ 1.03
HMG20B-216ENST00000585900 LRRC26Q2I0M4 334 aa21.48■■□□□ 1.03
HMG20B-216ENST00000585900 RRP12Q5JTH9 1297 aaKnown RBP21.48■■□□□ 1.03
HMG20B-216ENST00000585900 PRAMEF19Q5SWL8 479 aa21.48■■□□□ 1.03
HMG20B-216ENST00000585900 ANO1Q5XXA6 986 aa21.48■■□□□ 1.03
HMG20B-216ENST00000585900 CHST13Q8NET6 341 aa21.48■■□□□ 1.03
HMG20B-216ENST00000585900 PRO3102Q9H379 93 aa21.48■■□□□ 1.03
HMG20B-216ENST00000585900 INCENPQ9NQS7 918 aa21.48■■□□□ 1.03
HMG20B-216ENST00000585900 NMT2O60551 498 aa21.47■■□□□ 1.03
HMG20B-216ENST00000585900 RARBP10826 455 aa21.47■■□□□ 1.03
HMG20B-216ENST00000585900 SYN1P17600 705 aa21.47■■□□□ 1.03
HMG20B-216ENST00000585900 MCCP23508 829 aa21.47■■□□□ 1.03
HMG20B-216ENST00000585900 GJC2Q5T442 439 aaPredicted RBP21.47■■□□□ 1.03
HMG20B-216ENST00000585900 ANKRD35Q8N283 1001 aa21.47■■□□□ 1.03
HMG20B-216ENST00000585900 MSL3Q8N5Y2 521 aaKnown RBP21.47■■□□□ 1.03
HMG20B-216ENST00000585900 STAG1Q8WVM7 1258 aa21.47■■□□□ 1.03
HMG20B-216ENST00000585900 IL17RBQ9NRM6 502 aa21.47■■□□□ 1.03
HMG20B-216ENST00000585900 RIPK3Q9Y572 518 aa21.47■■□□□ 1.03
HMG20B-216ENST00000585900 FGRP09769 529 aa21.46■■□□□ 1.03
HMG20B-216ENST00000585900 PCP11498 1178 aaKnown RBP21.46■■□□□ 1.03
HMG20B-216ENST00000585900 CCDC96Q2M329 555 aa21.46■■□□□ 1.03
HMG20B-216ENST00000585900 CHMP4CQ96CF2 233 aa21.46■■□□□ 1.03
HMG20B-216ENST00000585900 PLA2G6O60733 806 aa21.45■■□□□ 1.02
HMG20B-216ENST00000585900 AKR1A1P14550 325 aa21.45■■□□□ 1.02
HMG20B-216ENST00000585900 HAND2P61296 217 aa21.45■■□□□ 1.02
HMG20B-216ENST00000585900 RCSD1Q6JBY9 416 aa21.45■■□□□ 1.02
HMG20B-216ENST00000585900 MFSD6Q6ZSS7 791 aa21.45■■□□□ 1.02
HMG20B-216ENST00000585900 KCTD1Q719H9 257 aa21.45■■□□□ 1.02
HMG20B-216ENST00000585900 RNF41Q9H4P4 317 aaPredicted RBP21.45■■□□□ 1.02
HMG20B-216ENST00000585900 XPNPEP3Q9NQH7 507 aa21.45■■□□□ 1.02
HMG20B-216ENST00000585900 HOMER2Q9NSB8 354 aa21.45■■□□□ 1.02
HMG20B-216ENST00000585900 MTMR7Q9Y216 660 aa21.45■■□□□ 1.02
HMG20B-216ENST00000585900 SYNGAP1Q96PV0 1343 aa21.45■■□□□ 1.02
HMG20B-216ENST00000585900 ATN1P54259 1190 aaPredicted RBP21.44■■□□□ 1.02
HMG20B-216ENST00000585900 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.44■■□□□ 1.02
HMG20B-216ENST00000585900 DCAF4Q8WV16 495 aa21.44■■□□□ 1.02
HMG20B-216ENST00000585900 GDF15Q99988 308 aa21.44■■□□□ 1.02
HMG20B-216ENST00000585900 ACAD9Q9H845 621 aa21.44■■□□□ 1.02
HMG20B-216ENST00000585900 RANBP2P49792 3224 aaKnown RBP21.43■■□□□ 1.02
HMG20B-216ENST00000585900 DNAJC25-GNG10A0A024R161 153 aa21.43■■□□□ 1.02
HMG20B-216ENST00000585900 TOP1P11387 765 aaKnown RBP21.43■■□□□ 1.02
HMG20B-216ENST00000585900 BMP8BP34820 402 aa21.43■■□□□ 1.02
HMG20B-216ENST00000585900 LRRC41Q15345 812 aa21.43■■□□□ 1.02
HMG20B-216ENST00000585900 TKFCQ3LXA3 575 aa21.43■■□□□ 1.02
HMG20B-216ENST00000585900 AKNAD1Q5T1N1 836 aa21.43■■□□□ 1.02
HMG20B-216ENST00000585900 CWC27Q6UX04 472 aaKnown RBP21.43■■□□□ 1.02
HMG20B-216ENST00000585900 ZNF467Q7Z7K2 595 aaPredicted RBP21.43■■□□□ 1.02
HMG20B-216ENST00000585900 RNF180Q86T96 592 aa21.43■■□□□ 1.02
HMG20B-216ENST00000585900 TCP11L1Q9NUJ3 509 aa21.43■■□□□ 1.02
HMG20B-216ENST00000585900 PRKAG2Q9UGJ0 569 aa21.43■■□□□ 1.02
HMG20B-216ENST00000585900 TACC3Q9Y6A5 838 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms