RNA–Protein interactions for RNA: ENST00000583548.1

NUP85-221, Transcript of nucleoporin 85, humanhuman

TSL 5

Gene NUP85, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-221ENST00000583548 RAI14Q9P0K7 980 aa7.82□□□□□ -1.16
NUP85-221ENST00000583548 ZHX1Q9UKY1 873 aaPredicted RBP7.82□□□□□ -1.16
NUP85-221ENST00000583548 TNKSO95271 1327 aa7.81□□□□□ -1.16
NUP85-221ENST00000583548 UMODL1Q5DID0 1318 aa7.81□□□□□ -1.16
NUP85-221ENST00000583548 REV3LO60673 3130 aa7.81□□□□□ -1.16
NUP85-221ENST00000583548 ZNF318Q5VUA4 2279 aa7.81□□□□□ -1.16
NUP85-221ENST00000583548 ZEB2O60315 1214 aa7.81□□□□□ -1.16
NUP85-221ENST00000583548 BAIAP3O94812 1187 aa7.81□□□□□ -1.16
NUP85-221ENST00000583548 PGK2P07205 417 aa7.81□□□□□ -1.16
NUP85-221ENST00000583548 DSG3P32926 999 aa7.81□□□□□ -1.16
NUP85-221ENST00000583548 IL15P40933 162 aaPredicted RBP7.81□□□□□ -1.16
NUP85-221ENST00000583548 NKX3-2P78367 333 aa7.81□□□□□ -1.16
NUP85-221ENST00000583548 ITGA7Q13683 1181 aa7.81□□□□□ -1.16
NUP85-221ENST00000583548 TTLL4Q14679 1199 aa7.81□□□□□ -1.16
NUP85-221ENST00000583548 SHROOM1Q2M3G4 852 aaPredicted RBP7.81□□□□□ -1.16
NUP85-221ENST00000583548 NBPF20Q3BBV1 942 aa7.81□□□□□ -1.16
NUP85-221ENST00000583548 CERKLQ49MI3 558 aaPredicted RBP7.81□□□□□ -1.16
NUP85-221ENST00000583548 MAMDC4Q6UXC1 1216 aa7.81□□□□□ -1.16
NUP85-221ENST00000583548 CERS3Q8IU89 383 aa7.81□□□□□ -1.16
NUP85-221ENST00000583548 RIOX2Q8IUF8 465 aa7.81□□□□□ -1.16
NUP85-221ENST00000583548 MAPKAPK5Q8IW41 473 aa7.81□□□□□ -1.16
NUP85-221ENST00000583548 FBXL6Q8N531 539 aa7.81□□□□□ -1.16
NUP85-221ENST00000583548 ZNF384Q8TF68 577 aa7.81□□□□□ -1.16
NUP85-221ENST00000583548 TGFBRAP1Q8WUH2 860 aa7.81□□□□□ -1.16
NUP85-221ENST00000583548 CDCA7LQ96GN5 454 aa7.81□□□□□ -1.16
NUP85-221ENST00000583548 EHD4Q9H223 541 aa7.81□□□□□ -1.16
NUP85-221ENST00000583548 LRP2BPQ9P2M1 347 aa7.81□□□□□ -1.16
NUP85-221ENST00000583548 SERPINB13Q9UIV8 391 aa7.81□□□□□ -1.16
NUP85-221ENST00000583548 PALD1Q9ULE6 856 aa7.81□□□□□ -1.16
NUP85-221ENST00000583548 SIPA1L1O43166 1804 aa7.8□□□□□ -1.16
NUP85-221ENST00000583548 COL4A4P53420 1690 aaPredicted RBP7.8□□□□□ -1.16
NUP85-221ENST00000583548 A0A1B0GUL7 405 aa7.8□□□□□ -1.16
NUP85-221ENST00000583548 MYADML2A6NDP7 307 aa7.8□□□□□ -1.16
NUP85-221ENST00000583548 FLOT1O75955 427 aa7.8□□□□□ -1.16
NUP85-221ENST00000583548 IRS1P35568 1242 aa7.8□□□□□ -1.16
NUP85-221ENST00000583548 KCNJ6P48051 423 aa7.8□□□□□ -1.16
NUP85-221ENST00000583548 RFX5P48382 616 aaPredicted RBP7.8□□□□□ -1.16
NUP85-221ENST00000583548 PPP4CP60510 307 aa7.8□□□□□ -1.16
NUP85-221ENST00000583548 PTPROQ16827 1216 aa7.8□□□□□ -1.16
NUP85-221ENST00000583548 TIGD5Q53EQ6 642 aa7.8□□□□□ -1.16
NUP85-221ENST00000583548 IER5LQ5T953 404 aa7.8□□□□□ -1.16
NUP85-221ENST00000583548 ZNF467Q7Z7K2 595 aaPredicted RBP7.8□□□□□ -1.16
NUP85-221ENST00000583548 MAGEB6Q8N7X4 407 aa7.8□□□□□ -1.16
NUP85-221ENST00000583548 ACER1Q8TDN7 264 aa7.8□□□□□ -1.16
NUP85-221ENST00000583548 GDPD5Q8WTR4 605 aa7.8□□□□□ -1.16
NUP85-221ENST00000583548 ANKS1AQ92625 1134 aa7.8□□□□□ -1.16
NUP85-221ENST00000583548 SCLYQ96I15 445 aa7.8□□□□□ -1.16
NUP85-221ENST00000583548 AGBL1Q96MI9 1066 aa7.8□□□□□ -1.16
NUP85-221ENST00000583548 TGS1Q96RS0 853 aaKnown RBP7.8□□□□□ -1.16
NUP85-221ENST00000583548 ZBED2Q9BTP6 218 aa7.8□□□□□ -1.16
NUP85-221ENST00000583548 ABHD16BQ9H3Z7 469 aa7.8□□□□□ -1.16
NUP85-221ENST00000583548 AATFQ9NY61 560 aaKnown RBP eCLIP7.8□□□□□ -1.16
NUP85-221ENST00000583548 AKAP2Q9Y2D5 859 aa7.8□□□□□ -1.16
NUP85-221ENST00000583548 TRANK1O15050 2925 aa7.79□□□□□ -1.16
NUP85-221ENST00000583548 TMEM221A6NGB7 291 aa7.79□□□□□ -1.16
NUP85-221ENST00000583548 M0R296 226 aa7.79□□□□□ -1.16
NUP85-221ENST00000583548 NCK2O43639 380 aa7.79□□□□□ -1.16
NUP85-221ENST00000583548 B4GALT4O60513 344 aa7.79□□□□□ -1.16
NUP85-221ENST00000583548 SNAI1O95863 264 aaPredicted RBP7.79□□□□□ -1.16
NUP85-221ENST00000583548 ERVK-21P61565 698 aa7.79□□□□□ -1.16
NUP85-221ENST00000583548 ACVR2BQ13705 512 aa7.79□□□□□ -1.16
NUP85-221ENST00000583548 CCDC144BQ3MJ40 725 aa7.79□□□□□ -1.16
NUP85-221ENST00000583548 NAA16Q6N069 864 aaPredicted RBP7.79□□□□□ -1.16
NUP85-221ENST00000583548 TRIM67Q6ZTA4 783 aa7.79□□□□□ -1.16
NUP85-221ENST00000583548 DEFB128Q7Z7B8 93 aa7.79□□□□□ -1.16
NUP85-221ENST00000583548 TTC6Q86TZ1 520 aa7.79□□□□□ -1.16
NUP85-221ENST00000583548 WWC1Q8IX03 1113 aa7.79□□□□□ -1.16
NUP85-221ENST00000583548 SPATA5Q8NB90 893 aa7.79□□□□□ -1.16
NUP85-221ENST00000583548 PABPC5Q96DU9 382 aaKnown RBP7.79□□□□□ -1.16
NUP85-221ENST00000583548 DDX11Q96FC9 970 aa7.79□□□□□ -1.16
NUP85-221ENST00000583548 SH2D4AQ9H788 454 aa7.79□□□□□ -1.16
NUP85-221ENST00000583548 SUGCTQ9HAC7 445 aa7.79□□□□□ -1.16
NUP85-221ENST00000583548 FAM86C1Q9NVL1 165 aa7.79□□□□□ -1.16
NUP85-221ENST00000583548 MUTYHQ9UIF7 546 aa7.79□□□□□ -1.16
NUP85-221ENST00000583548 ZDBF2Q9HCK1 2354 aa7.79□□□□□ -1.16
NUP85-221ENST00000583548 SMCHD1A6NHR9 2005 aa7.79□□□□□ -1.16
NUP85-221ENST00000583548 FANCIQ9NVI1 1328 aa7.78□□□□□ -1.16
NUP85-221ENST00000583548 PRR23AA6NEV1 266 aa7.78□□□□□ -1.16
NUP85-221ENST00000583548 H3BQ06 376 aaPredicted RBP7.78□□□□□ -1.16
NUP85-221ENST00000583548 KRT37O76014 449 aa7.78□□□□□ -1.16
NUP85-221ENST00000583548 ARHGEF15O94989 841 aa7.78□□□□□ -1.16
NUP85-221ENST00000583548 ADORA1P30542 326 aa7.78□□□□□ -1.16
NUP85-221ENST00000583548 STAT3P40763 770 aa7.78□□□□□ -1.16
NUP85-221ENST00000583548 TMEM132BQ14DG7 1078 aa7.78□□□□□ -1.16
NUP85-221ENST00000583548 GORABQ5T7V8 394 aa7.78□□□□□ -1.16
NUP85-221ENST00000583548 CXCL17Q6UXB2 119 aa7.78□□□□□ -1.16
NUP85-221ENST00000583548 RNF135Q8IUD6 432 aa7.78□□□□□ -1.16
NUP85-221ENST00000583548 RETREG2Q8NC44 543 aa7.78□□□□□ -1.16
NUP85-221ENST00000583548 ATG4CQ96DT6 458 aa7.78□□□□□ -1.16
NUP85-221ENST00000583548 MRPL38Q96DV4 380 aaKnown RBP7.78□□□□□ -1.16
NUP85-221ENST00000583548 CRBNQ96SW2 442 aa7.78□□□□□ -1.16
NUP85-221ENST00000583548 FSD1Q9BTV5 496 aa7.78□□□□□ -1.16
NUP85-221ENST00000583548 FTOQ9C0B1 505 aaKnown RBP eCLIP7.78□□□□□ -1.16
NUP85-221ENST00000583548 TRPV6Q9H1D0 765 aa7.78□□□□□ -1.16
NUP85-221ENST00000583548 HMG20BQ9P0W2 317 aa7.78□□□□□ -1.16
NUP85-221ENST00000583548 SAP30BPQ9UHR5 308 aaKnown RBP7.78□□□□□ -1.16
NUP85-221ENST00000583548 HDAC5Q9UQL6 1122 aa7.78□□□□□ -1.16
NUP85-221ENST00000583548 TRPC6Q9Y210 931 aa7.78□□□□□ -1.16
NUP85-221ENST00000583548 PITPNM1O00562 1244 aa7.77□□□□□ -1.17
NUP85-221ENST00000583548 WDR46O15213 610 aaKnown RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms