RNA–Protein interactions for RNA: ENST00000581160.5

CDK5RAP3-220, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 490 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-220ENST00000581160 CCDC82Q8N4S0 544 aa10.63□□□□□ -0.71
CDK5RAP3-220ENST00000581160 PRPF38AQ8NAV1 312 aaKnown RBP10.63□□□□□ -0.71
CDK5RAP3-220ENST00000581160 RNF26Q9BY78 433 aaPredicted RBP10.63□□□□□ -0.71
CDK5RAP3-220ENST00000581160 RPAP3Q9H6T3 665 aaPredicted RBP10.63□□□□□ -0.71
CDK5RAP3-220ENST00000581160 VAT1LQ9HCJ6 419 aa10.63□□□□□ -0.71
CDK5RAP3-220ENST00000581160 HOXC10Q9NYD6 342 aa10.63□□□□□ -0.71
CDK5RAP3-220ENST00000581160 V9GY48 417 aaPredicted RBP10.63□□□□□ -0.71
CDK5RAP3-220ENST00000581160 MANSC4A6NHS7 340 aaPredicted RBP10.62□□□□□ -0.71
CDK5RAP3-220ENST00000581160 RASSF10A6NK89 507 aa10.62□□□□□ -0.71
CDK5RAP3-220ENST00000581160 HSP90AA1P07900 732 aaKnown RBP10.62□□□□□ -0.71
CDK5RAP3-220ENST00000581160 FDX1P10109 184 aa10.62□□□□□ -0.71
CDK5RAP3-220ENST00000581160 FDPSP14324 419 aaKnown RBP10.62□□□□□ -0.71
CDK5RAP3-220ENST00000581160 DSG3P32926 999 aa10.62□□□□□ -0.71
CDK5RAP3-220ENST00000581160 STAT2P52630 851 aa10.62□□□□□ -0.71
CDK5RAP3-220ENST00000581160 HMGN5P82970 282 aaKnown RBP10.62□□□□□ -0.71
CDK5RAP3-220ENST00000581160 AKAP17AQ02040 695 aaKnown RBP10.62□□□□□ -0.71
CDK5RAP3-220ENST00000581160 MKRN3Q13064 507 aaKnown RBP10.62□□□□□ -0.71
CDK5RAP3-220ENST00000581160 PABPC4Q13310 644 aaKnown RBP eCLIP10.62□□□□□ -0.71
CDK5RAP3-220ENST00000581160 TREML2Q5T2D2 321 aa10.62□□□□□ -0.71
CDK5RAP3-220ENST00000581160 TRIM22Q8IYM9 498 aa10.62□□□□□ -0.71
CDK5RAP3-220ENST00000581160 PHKBQ93100 1093 aa10.62□□□□□ -0.71
CDK5RAP3-220ENST00000581160 MTMR8Q96EF0 704 aa10.62□□□□□ -0.71
CDK5RAP3-220ENST00000581160 SLF1Q9BQI6 1058 aa10.62□□□□□ -0.71
CDK5RAP3-220ENST00000581160 SLC26A6Q9BXS9 759 aa10.62□□□□□ -0.71
CDK5RAP3-220ENST00000581160 TANGO6Q9C0B7 1094 aa10.62□□□□□ -0.71
CDK5RAP3-220ENST00000581160 CPVLQ9H3G5 476 aa10.62□□□□□ -0.71
CDK5RAP3-220ENST00000581160 JMJD4Q9H9V9 463 aa10.62□□□□□ -0.71
CDK5RAP3-220ENST00000581160 CWC22Q9HCG8 908 aaKnown RBP10.62□□□□□ -0.71
CDK5RAP3-220ENST00000581160 RBM27Q9P2N5 1060 aaKnown RBP10.62□□□□□ -0.71
CDK5RAP3-220ENST00000581160 ORC3Q9UBD5 711 aaPredicted RBP10.62□□□□□ -0.71
CDK5RAP3-220ENST00000581160 PRR12Q9ULL5 1215 aa10.62□□□□□ -0.71
CDK5RAP3-220ENST00000581160 ISY1Q9ULR0 285 aaKnown RBP10.62□□□□□ -0.71
CDK5RAP3-220ENST00000581160 ADAMTS5Q9UNA0 930 aa10.62□□□□□ -0.71
CDK5RAP3-220ENST00000581160 AGTPBP1Q9UPW5 1226 aa10.62□□□□□ -0.71
CDK5RAP3-220ENST00000581160 SMC3Q9UQE7 1217 aa10.62□□□□□ -0.71
CDK5RAP3-220ENST00000581160 SLC45A1Q9Y2W3 748 aa10.62□□□□□ -0.71
CDK5RAP3-220ENST00000581160 CNTNAP5Q8WYK1 1306 aa10.61□□□□□ -0.71
CDK5RAP3-220ENST00000581160 STK36Q9NRP7 1315 aa10.61□□□□□ -0.71
CDK5RAP3-220ENST00000581160 CCL15-CCL14A0A0B4J2E2 113 aa10.61□□□□□ -0.71
CDK5RAP3-220ENST00000581160 PNMA6FA0A0J9YX94 578 aa10.61□□□□□ -0.71
CDK5RAP3-220ENST00000581160 PTPDC1A2A3K4 754 aa10.61□□□□□ -0.71
CDK5RAP3-220ENST00000581160 JAK2O60674 1132 aa10.61□□□□□ -0.71
CDK5RAP3-220ENST00000581160 FLOT1O75955 427 aa10.61□□□□□ -0.71
CDK5RAP3-220ENST00000581160 DEXIO95424 95 aa10.61□□□□□ -0.71
CDK5RAP3-220ENST00000581160 OSBPP22059 807 aa10.61□□□□□ -0.71
CDK5RAP3-220ENST00000581160 GJB2P29033 226 aa10.61□□□□□ -0.71
CDK5RAP3-220ENST00000581160 IKQ13123 557 aaPredicted RBP10.61□□□□□ -0.71
CDK5RAP3-220ENST00000581160 PKN1Q16512 942 aa10.61□□□□□ -0.71
CDK5RAP3-220ENST00000581160 CCL15Q16663 113 aa10.61□□□□□ -0.71
CDK5RAP3-220ENST00000581160 ANKRD23Q86SG2 305 aa10.61□□□□□ -0.71
CDK5RAP3-220ENST00000581160 BRI3BPQ8WY22 251 aa10.61□□□□□ -0.71
CDK5RAP3-220ENST00000581160 WASF1Q92558 559 aa10.61□□□□□ -0.71
CDK5RAP3-220ENST00000581160 KIFC2Q96AC6 838 aa10.61□□□□□ -0.71
CDK5RAP3-220ENST00000581160 RRP36Q96EU6 259 aaKnown RBP10.61□□□□□ -0.71
CDK5RAP3-220ENST00000581160 DDX11Q96FC9 970 aa10.61□□□□□ -0.71
CDK5RAP3-220ENST00000581160 PIGSQ96S52 555 aa10.61□□□□□ -0.71
CDK5RAP3-220ENST00000581160 FOXD4L1Q9NU39 408 aa10.61□□□□□ -0.71
CDK5RAP3-220ENST00000581160 FBXO28Q9NVF7 368 aa10.61□□□□□ -0.71
CDK5RAP3-220ENST00000581160 PPP1R9AQ9ULJ8 1098 aa10.61□□□□□ -0.71
CDK5RAP3-220ENST00000581160 MYPNQ86TC9 1320 aa10.6□□□□□ -0.71
CDK5RAP3-220ENST00000581160 PTPRFP10586 1907 aa10.6□□□□□ -0.71
CDK5RAP3-220ENST00000581160 BTBD19C9JJ37 291 aa10.6□□□□□ -0.71
CDK5RAP3-220ENST00000581160 ZBTB5O15062 677 aa10.6□□□□□ -0.71
CDK5RAP3-220ENST00000581160 DTNBO60941 627 aa10.6□□□□□ -0.71
CDK5RAP3-220ENST00000581160 ZBED4O75132 1171 aa10.6□□□□□ -0.71
CDK5RAP3-220ENST00000581160 TM4SF4P48230 202 aa10.6□□□□□ -0.71
CDK5RAP3-220ENST00000581160 PFKFB3Q16875 520 aaPredicted RBP10.6□□□□□ -0.71
CDK5RAP3-220ENST00000581160 CYP4F22Q6NT55 531 aa10.6□□□□□ -0.71
CDK5RAP3-220ENST00000581160 REM2Q8IYK8 340 aaPredicted RBP10.6□□□□□ -0.71
CDK5RAP3-220ENST00000581160 FAM184AQ8NB25 1140 aa10.6□□□□□ -0.71
CDK5RAP3-220ENST00000581160 SPRYD3Q8NCJ5 442 aa10.6□□□□□ -0.71
CDK5RAP3-220ENST00000581160 RGS22Q8NE09 1264 aa10.6□□□□□ -0.71
CDK5RAP3-220ENST00000581160 P2RX7Q99572 595 aaKnown RBP10.6□□□□□ -0.71
CDK5RAP3-220ENST00000581160 PTPN18Q99952 460 aa10.6□□□□□ -0.71
CDK5RAP3-220ENST00000581160 RANBP17Q9H2T7 1088 aaKnown RBP10.6□□□□□ -0.71
CDK5RAP3-220ENST00000581160 ZCCHC17Q9NP64 241 aaKnown RBP10.6□□□□□ -0.71
CDK5RAP3-220ENST00000581160 KIF3AQ9Y496 699 aa10.6□□□□□ -0.71
CDK5RAP3-220ENST00000581160 hCG_1642624A0A1W2PR95 340 aa10.59□□□□□ -0.71
CDK5RAP3-220ENST00000581160 PDHXO00330 501 aa10.59□□□□□ -0.71
CDK5RAP3-220ENST00000581160 VWA5AO00534 786 aa10.59□□□□□ -0.71
CDK5RAP3-220ENST00000581160 PPFIA3O75145 1194 aa10.59□□□□□ -0.71
CDK5RAP3-220ENST00000581160 SCG2P13521 617 aa10.59□□□□□ -0.71
CDK5RAP3-220ENST00000581160 PDIA4P13667 645 aaKnown RBP10.59□□□□□ -0.71
CDK5RAP3-220ENST00000581160 KIF23Q02241 960 aaPredicted RBP10.59□□□□□ -0.71
CDK5RAP3-220ENST00000581160 TRAF1Q13077 416 aa10.59□□□□□ -0.71
CDK5RAP3-220ENST00000581160 CDC37Q16543 378 aaPredicted RBP10.59□□□□□ -0.71
CDK5RAP3-220ENST00000581160 OTUD7BQ6GQQ9 843 aa10.59□□□□□ -0.71
CDK5RAP3-220ENST00000581160 LBX2Q6XYB7 198 aa10.59□□□□□ -0.71
CDK5RAP3-220ENST00000581160 PAXIP1Q6ZW49 1069 aaPredicted RBP10.59□□□□□ -0.71
CDK5RAP3-220ENST00000581160 PIBF1Q8WXW3 757 aa10.59□□□□□ -0.71
CDK5RAP3-220ENST00000581160 CAPNS2Q96L46 248 aa10.59□□□□□ -0.71
CDK5RAP3-220ENST00000581160 ASCC2Q9H1I8 757 aaPredicted RBP10.59□□□□□ -0.71
CDK5RAP3-220ENST00000581160 SLC38A10Q9HBR0 1119 aa10.59□□□□□ -0.71
CDK5RAP3-220ENST00000581160 SEC63Q9UGP8 760 aaKnown RBP10.59□□□□□ -0.71
CDK5RAP3-220ENST00000581160 PNMA3Q9UL41 463 aa10.59□□□□□ -0.71
CDK5RAP3-220ENST00000581160 PNMA2Q9UL42 364 aa10.59□□□□□ -0.71
CDK5RAP3-220ENST00000581160 LOC285556D6RIA3 1793 aa10.59□□□□□ -0.71
CDK5RAP3-220ENST00000581160 BAZ2BQ9UIF8 2168 aaKnown RBP10.59□□□□□ -0.71
CDK5RAP3-220ENST00000581160 SPDYE16A6NNV3 312 aaPredicted RBP10.58□□□□□ -0.72
CDK5RAP3-220ENST00000581160 hCG_1984214I3L0E3 225 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 325.3 ms