RNA–Protein interactions for RNA: ENST00000578234.1

SMARCD2-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2

Gene SMARCD2, Length 595 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-207ENST00000578234 MSL3Q8N5Y2 521 aaKnown RBP14.99□□□□□ -0.01
SMARCD2-207ENST00000578234 MKL1Q969V6 931 aa14.99□□□□□ -0.01
SMARCD2-207ENST00000578234 NUP88Q99567 741 aaPredicted RBP14.99□□□□□ -0.01
SMARCD2-207ENST00000578234 EPB41L4AQ9HCS5 686 aaPredicted RBP14.99□□□□□ -0.01
SMARCD2-207ENST00000578234 XPNPEP3Q9NQH7 507 aa14.99□□□□□ -0.01
SMARCD2-207ENST00000578234 CLIP2Q9UDT6 1046 aa14.99□□□□□ -0.01
SMARCD2-207ENST00000578234 PHF24Q9UPV7 400 aa14.99□□□□□ -0.01
SMARCD2-207ENST00000578234 TTC41PQ6P2S7 1318 aa14.98□□□□□ -0.01
SMARCD2-207ENST00000578234 NDUFB10O96000 172 aa14.98□□□□□ -0.01
SMARCD2-207ENST00000578234 APPP05067 770 aa14.98□□□□□ -0.01
SMARCD2-207ENST00000578234 TDO2P48775 406 aa14.98□□□□□ -0.01
SMARCD2-207ENST00000578234 SNRNP48Q6IEG0 339 aaKnown RBP14.98□□□□□ -0.01
SMARCD2-207ENST00000578234 RNF180Q86T96 592 aa14.98□□□□□ -0.01
SMARCD2-207ENST00000578234 BADQ92934 168 aa14.98□□□□□ -0.01
SMARCD2-207ENST00000578234 CNPY2Q9Y2B0 182 aa14.98□□□□□ -0.01
SMARCD2-207ENST00000578234 DNAJC25-GNG10A0A024R161 153 aa14.97□□□□□ -0.01
SMARCD2-207ENST00000578234 M0R2C6 588 aa14.97□□□□□ -0.01
SMARCD2-207ENST00000578234 ERC2O15083 957 aa14.97□□□□□ -0.01
SMARCD2-207ENST00000578234 ZNF865P0CJ78 1059 aaPredicted RBP14.97□□□□□ -0.01
SMARCD2-207ENST00000578234 AKR1A1P14550 325 aa14.97□□□□□ -0.01
SMARCD2-207ENST00000578234 TAL1P17542 331 aaPredicted RBP14.97□□□□□ -0.01
SMARCD2-207ENST00000578234 SHHQ15465 462 aa14.97□□□□□ -0.01
SMARCD2-207ENST00000578234 MAMDC4Q6UXC1 1216 aa14.97□□□□□ -0.01
SMARCD2-207ENST00000578234 IFNL3Q8IZI9 196 aa14.97□□□□□ -0.01
SMARCD2-207ENST00000578234 VTI1AQ96AJ9 217 aa14.97□□□□□ -0.01
SMARCD2-207ENST00000578234 DDX11Q96FC9 970 aa14.97□□□□□ -0.01
SMARCD2-207ENST00000578234 NACAP1Q9BZK3 213 aa14.97□□□□□ -0.01
SMARCD2-207ENST00000578234 PDLIM7Q9NR12 457 aa14.97□□□□□ -0.01
SMARCD2-207ENST00000578234 MTMR4Q9NYA4 1195 aa14.97□□□□□ -0.01
SMARCD2-207ENST00000578234 FEM1BQ9UK73 627 aa14.97□□□□□ -0.01
SMARCD2-207ENST00000578234 RIPK3Q9Y572 518 aa14.97□□□□□ -0.01
SMARCD2-207ENST00000578234 LTBP2Q14767 1821 aa14.96□□□□□ -0.01
SMARCD2-207ENST00000578234 SYNGAP1Q96PV0 1343 aa14.96□□□□□ -0.01
SMARCD2-207ENST00000578234 MYH4Q9Y623 1939 aa14.96□□□□□ -0.01
SMARCD2-207ENST00000578234 ZBED4O75132 1171 aa14.96□□□□□ -0.01
SMARCD2-207ENST00000578234 TTLL1O95922 423 aa14.96□□□□□ -0.01
SMARCD2-207ENST00000578234 PGK1P00558 417 aa14.96□□□□□ -0.01
SMARCD2-207ENST00000578234 CENPBP07199 599 aaPredicted RBP14.96□□□□□ -0.01
SMARCD2-207ENST00000578234 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.96□□□□□ -0.01
SMARCD2-207ENST00000578234 ZNF467Q7Z7K2 595 aaPredicted RBP14.96□□□□□ -0.01
SMARCD2-207ENST00000578234 GMCL1P1Q8NEA9 526 aa14.96□□□□□ -0.01
SMARCD2-207ENST00000578234 PI4K2BQ8TCG2 481 aa14.96□□□□□ -0.01
SMARCD2-207ENST00000578234 CHMP4CQ96CF2 233 aa14.96□□□□□ -0.01
SMARCD2-207ENST00000578234 CEP95Q96GE4 821 aa14.96□□□□□ -0.01
SMARCD2-207ENST00000578234 TSEN34Q9BSV6 310 aaKnown RBP14.96□□□□□ -0.01
SMARCD2-207ENST00000578234 SLC38A10Q9HBR0 1119 aa14.96□□□□□ -0.01
SMARCD2-207ENST00000578234 TACC3Q9Y6A5 838 aa14.96□□□□□ -0.01
SMARCD2-207ENST00000578234 PQBP1O60828 265 aaKnown RBP14.95□□□□□ -0.02
SMARCD2-207ENST00000578234 PRDM1O75626 825 aa14.95□□□□□ -0.02
SMARCD2-207ENST00000578234 OAZ1P54368 228 aa14.95□□□□□ -0.02
SMARCD2-207ENST00000578234 TLE2Q04725 743 aa14.95□□□□□ -0.02
SMARCD2-207ENST00000578234 PDE4BQ07343 736 aa14.95□□□□□ -0.02
SMARCD2-207ENST00000578234 SH3RF1Q7Z6J0 888 aa14.95□□□□□ -0.02
SMARCD2-207ENST00000578234 CPXCR1Q8N123 301 aa14.95□□□□□ -0.02
SMARCD2-207ENST00000578234 NEDD1Q8NHV4 660 aa14.95□□□□□ -0.02
SMARCD2-207ENST00000578234 KIFC2Q96AC6 838 aa14.95□□□□□ -0.02
SMARCD2-207ENST00000578234 SEC62Q99442 399 aaKnown RBP14.95□□□□□ -0.02
SMARCD2-207ENST00000578234 FAM184BQ9ULE4 1060 aa14.95□□□□□ -0.02
SMARCD2-207ENST00000578234 A0A1W2PQ45 241 aaPredicted RBP14.94□□□□□ -0.02
SMARCD2-207ENST00000578234 A0A1W2PQY0 241 aa14.94□□□□□ -0.02
SMARCD2-207ENST00000578234 TRIM43BA6NCK2 446 aa14.94□□□□□ -0.02
SMARCD2-207ENST00000578234 ADAMTS4O75173 837 aa14.94□□□□□ -0.02
SMARCD2-207ENST00000578234 SNAI1O95863 264 aaPredicted RBP14.94□□□□□ -0.02
SMARCD2-207ENST00000578234 SLC3A2P08195 630 aaKnown RBP14.94□□□□□ -0.02
SMARCD2-207ENST00000578234 FDX1P10109 184 aa14.94□□□□□ -0.02
SMARCD2-207ENST00000578234 ZMYM1Q5SVZ6 1142 aa14.94□□□□□ -0.02
SMARCD2-207ENST00000578234 C9orf50Q5SZB4 431 aa14.94□□□□□ -0.02
SMARCD2-207ENST00000578234 CHST13Q8NET6 341 aa14.94□□□□□ -0.02
SMARCD2-207ENST00000578234 TRIM43Q96BQ3 446 aaPredicted RBP14.94□□□□□ -0.02
SMARCD2-207ENST00000578234 RAVER2Q9HCJ3 691 aaKnown RBP14.94□□□□□ -0.02
SMARCD2-207ENST00000578234 FBXO40Q9UH90 709 aa14.94□□□□□ -0.02
SMARCD2-207ENST00000578234 PLIN4Q96Q06 1357 aa14.94□□□□□ -0.02
SMARCD2-207ENST00000578234 TSPY3P0CV98 308 aa14.93□□□□□ -0.02
SMARCD2-207ENST00000578234 TSPY8P0CW00 308 aa14.93□□□□□ -0.02
SMARCD2-207ENST00000578234 RAG1P15918 1043 aa14.93□□□□□ -0.02
SMARCD2-207ENST00000578234 PPARAQ07869 468 aa14.93□□□□□ -0.02
SMARCD2-207ENST00000578234 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.93□□□□□ -0.02
SMARCD2-207ENST00000578234 KLHDC9Q8NEP7 349 aa14.93□□□□□ -0.02
SMARCD2-207ENST00000578234 NUP133Q8WUM0 1156 aa14.93□□□□□ -0.02
SMARCD2-207ENST00000578234 LENG1Q96BZ8 264 aaPredicted RBP14.93□□□□□ -0.02
SMARCD2-207ENST00000578234 GUCD1Q96NT3 240 aa14.93□□□□□ -0.02
SMARCD2-207ENST00000578234 FSD1Q9BTV5 496 aa14.93□□□□□ -0.02
SMARCD2-207ENST00000578234 NAPBQ9H115 298 aa14.93□□□□□ -0.02
SMARCD2-207ENST00000578234 TMEM39AQ9NV64 488 aa14.93□□□□□ -0.02
SMARCD2-207ENST00000578234 ZHX1Q9UKY1 873 aaPredicted RBP14.93□□□□□ -0.02
SMARCD2-207ENST00000578234 SYNRGQ9UMZ2 1314 aa14.92□□□□□ -0.02
SMARCD2-207ENST00000578234 MOXD2PA6NHM9 499 aa14.92□□□□□ -0.02
SMARCD2-207ENST00000578234 KIAA0355O15063 1070 aa14.92□□□□□ -0.02
SMARCD2-207ENST00000578234 DUSP11O75319 330 aaKnown RBP14.92□□□□□ -0.02
SMARCD2-207ENST00000578234 CLTBP09497 229 aa14.92□□□□□ -0.02
SMARCD2-207ENST00000578234 BMP3P12645 472 aa14.92□□□□□ -0.02
SMARCD2-207ENST00000578234 ACLYP53396 1101 aa14.92□□□□□ -0.02
SMARCD2-207ENST00000578234 TFAP4Q01664 338 aa14.92□□□□□ -0.02
SMARCD2-207ENST00000578234 ACVR2BQ13705 512 aa14.92□□□□□ -0.02
SMARCD2-207ENST00000578234 SLFN13Q68D06 897 aa14.92□□□□□ -0.02
SMARCD2-207ENST00000578234 CCSAPQ6IQ19 270 aaPredicted RBP14.92□□□□□ -0.02
SMARCD2-207ENST00000578234 ANKRD33Q7Z3H0 272 aa14.92□□□□□ -0.02
SMARCD2-207ENST00000578234 LRRC47Q8N1G4 583 aaKnown RBP14.92□□□□□ -0.02
SMARCD2-207ENST00000578234 ANKRD35Q8N283 1001 aa14.92□□□□□ -0.02
SMARCD2-207ENST00000578234 OTUD7AQ8TE49 926 aaPredicted RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms