RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 CSF1RP07333 972 aa6.15□□□□□ -1.42
VAPA-203ENST00000577539 SLC5A1P13866 664 aa6.15□□□□□ -1.42
VAPA-203ENST00000577539 SYKP43405 635 aa6.15□□□□□ -1.42
VAPA-203ENST00000577539 KIF23Q02241 960 aaPredicted RBP6.15□□□□□ -1.42
VAPA-203ENST00000577539 HSP90AA4PQ58FG1 418 aa6.15□□□□□ -1.42
VAPA-203ENST00000577539 BRAPQ7Z569 592 aa6.15□□□□□ -1.42
VAPA-203ENST00000577539 VPS37DQ86XT2 251 aa6.15□□□□□ -1.42
VAPA-203ENST00000577539 FMR1NBQ8N0W7 255 aaPredicted RBP6.15□□□□□ -1.42
VAPA-203ENST00000577539 PDCL2Q8N4E4 241 aa6.15□□□□□ -1.42
VAPA-203ENST00000577539 ENGASEQ8NFI3 743 aa6.15□□□□□ -1.42
VAPA-203ENST00000577539 IFNKQ9P0W0 207 aa6.15□□□□□ -1.42
VAPA-203ENST00000577539 CAMTA1Q9Y6Y1 1673 aa6.15□□□□□ -1.42
VAPA-203ENST00000577539 MRC1P22897 1456 aa6.15□□□□□ -1.42
VAPA-203ENST00000577539 YEATS4O95619 227 aa6.15□□□□□ -1.42
VAPA-203ENST00000577539 UQCRFS1P1P0C7P4 283 aa6.15□□□□□ -1.42
VAPA-203ENST00000577539 PFKFB1P16118 471 aa6.15□□□□□ -1.42
VAPA-203ENST00000577539 SAFBQ15424 915 aaKnown RBP eCLIP6.15□□□□□ -1.42
VAPA-203ENST00000577539 PTPN14Q15678 1187 aa6.15□□□□□ -1.42
VAPA-203ENST00000577539 SPECC1Q5M775 1068 aa6.15□□□□□ -1.42
VAPA-203ENST00000577539 JMYQ8N9B5 988 aa6.15□□□□□ -1.42
VAPA-203ENST00000577539 PRKD2Q9BZL6 878 aa6.15□□□□□ -1.42
VAPA-203ENST00000577539 KIF1AQ12756 1690 aa6.15□□□□□ -1.42
VAPA-203ENST00000577539 TRPM3Q9HCF6 1732 aaPredicted RBP6.15□□□□□ -1.43
VAPA-203ENST00000577539 SCN11AQ9UI33 1791 aa6.15□□□□□ -1.43
VAPA-203ENST00000577539 ERICH2A1L162 156 aa6.15□□□□□ -1.43
VAPA-203ENST00000577539 EML1O00423 815 aa6.15□□□□□ -1.43
VAPA-203ENST00000577539 TNNI2P48788 182 aa6.15□□□□□ -1.43
VAPA-203ENST00000577539 EGFLAMQ63HQ2 1017 aa6.15□□□□□ -1.43
VAPA-203ENST00000577539 APOA5Q6Q788 366 aa6.15□□□□□ -1.43
VAPA-203ENST00000577539 LRRC8AQ8IWT6 810 aa6.15□□□□□ -1.43
VAPA-203ENST00000577539 CMTR1Q8N1G2 835 aaKnown RBP6.15□□□□□ -1.43
VAPA-203ENST00000577539 SLC43A3Q8NBI5 491 aa6.15□□□□□ -1.43
VAPA-203ENST00000577539 CLIC6Q96NY7 704 aa6.15□□□□□ -1.43
VAPA-203ENST00000577539 SEC31BQ9NQW1 1179 aa6.15□□□□□ -1.43
VAPA-203ENST00000577539 SALL1Q9NSC2 1324 aa6.15□□□□□ -1.43
VAPA-203ENST00000577539 AFDNP55196 1824 aaKnown RBP6.14□□□□□ -1.43
VAPA-203ENST00000577539 UBE2Q2LH0YL09 131 aa6.14□□□□□ -1.43
VAPA-203ENST00000577539 PRKAB2O43741 272 aa6.14□□□□□ -1.43
VAPA-203ENST00000577539 ADAMTS2O95450 1211 aa6.14□□□□□ -1.43
VAPA-203ENST00000577539 SERPINC1P01008 464 aa6.14□□□□□ -1.43
VAPA-203ENST00000577539 GTF2E1P29083 439 aaPredicted RBP6.14□□□□□ -1.43
VAPA-203ENST00000577539 CDC27P30260 824 aa6.14□□□□□ -1.43
VAPA-203ENST00000577539 SSRP1Q08945 709 aaKnown RBP6.14□□□□□ -1.43
VAPA-203ENST00000577539 PUM3Q15397 648 aaKnown RBP6.14□□□□□ -1.43
VAPA-203ENST00000577539 CEP135Q66GS9 1140 aa6.14□□□□□ -1.43
VAPA-203ENST00000577539 C16orf46Q6P387 395 aa6.14□□□□□ -1.43
VAPA-203ENST00000577539 DUSP9Q99956 384 aaKnown RBP6.14□□□□□ -1.43
VAPA-203ENST00000577539 NACAP1Q9BZK3 213 aa6.14□□□□□ -1.43
VAPA-203ENST00000577539 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.14□□□□□ -1.43
VAPA-203ENST00000577539 SLC4A4Q9Y6R1 1079 aa6.14□□□□□ -1.43
VAPA-203ENST00000577539 V9GYY5 206 aaPredicted RBP6.14□□□□□ -1.43
VAPA-203ENST00000577539 A0A1W2PQ27 194 aa6.14□□□□□ -1.43
VAPA-203ENST00000577539 A0A1W2PQ64 194 aa6.14□□□□□ -1.43
VAPA-203ENST00000577539 A0A1W2PQD8 194 aa6.14□□□□□ -1.43
VAPA-203ENST00000577539 CYP19A1P11511 503 aaPredicted RBP6.14□□□□□ -1.43
VAPA-203ENST00000577539 IGHMBP2P38935 993 aaKnown RBP6.14□□□□□ -1.43
VAPA-203ENST00000577539 SART3Q15020 963 aaKnown RBP6.14□□□□□ -1.43
VAPA-203ENST00000577539 UBE3CQ15386 1083 aa6.14□□□□□ -1.43
VAPA-203ENST00000577539 MFSD6Q6ZSS7 791 aa6.14□□□□□ -1.43
VAPA-203ENST00000577539 HOMER1Q86YM7 354 aa6.14□□□□□ -1.43
VAPA-203ENST00000577539 DHX40Q8IX18 779 aaKnown RBP6.14□□□□□ -1.43
VAPA-203ENST00000577539 TRIM22Q8IYM9 498 aa6.14□□□□□ -1.43
VAPA-203ENST00000577539 IFNL3Q8IZI9 196 aa6.14□□□□□ -1.43
VAPA-203ENST00000577539 PDILTQ8N807 584 aa6.14□□□□□ -1.43
VAPA-203ENST00000577539 SPATA5Q8NB90 893 aa6.14□□□□□ -1.43
VAPA-203ENST00000577539 LPIN2Q92539 896 aa6.14□□□□□ -1.43
VAPA-203ENST00000577539 MRFAP1L1Q96HT8 127 aa6.14□□□□□ -1.43
VAPA-203ENST00000577539 CITED4Q96RK1 184 aa6.14□□□□□ -1.43
VAPA-203ENST00000577539 HINFPQ9BQA5 517 aa6.14□□□□□ -1.43
VAPA-203ENST00000577539 XPO4Q9C0E2 1151 aaKnown RBP6.14□□□□□ -1.43
VAPA-203ENST00000577539 RAI14Q9P0K7 980 aa6.14□□□□□ -1.43
VAPA-203ENST00000577539 KCNJ14Q9UNX9 436 aa6.14□□□□□ -1.43
VAPA-203ENST00000577539 USP27XA6NNY8 438 aa6.14□□□□□ -1.43
VAPA-203ENST00000577539 SH2B2O14492 632 aaPredicted RBP6.14□□□□□ -1.43
VAPA-203ENST00000577539 SFPQP23246 707 aaKnown RBP eCLIP6.14□□□□□ -1.43
VAPA-203ENST00000577539 AKAP17AQ02040 695 aaKnown RBP6.14□□□□□ -1.43
VAPA-203ENST00000577539 PTPN21Q16825 1174 aa6.14□□□□□ -1.43
VAPA-203ENST00000577539 CFAP100Q494V2 611 aa6.14□□□□□ -1.43
VAPA-203ENST00000577539 OLFM4Q6UX06 510 aa6.14□□□□□ -1.43
VAPA-203ENST00000577539 BICDL1Q6ZP65 573 aa6.14□□□□□ -1.43
VAPA-203ENST00000577539 NLGN1Q8N2Q7 840 aa6.14□□□□□ -1.43
VAPA-203ENST00000577539 CNNM3Q8NE01 707 aa6.14□□□□□ -1.43
VAPA-203ENST00000577539 STRBPQ96SI9 672 aaKnown RBP6.14□□□□□ -1.43
VAPA-203ENST00000577539 PLA2G12BQ9BX93 195 aa6.14□□□□□ -1.43
VAPA-203ENST00000577539 COL5A2P05997 1499 aaPredicted RBP6.14□□□□□ -1.43
VAPA-203ENST00000577539 ZMYM6O95789 1325 aa6.14□□□□□ -1.43
VAPA-203ENST00000577539 NEDD4P46934 1319 aa6.14□□□□□ -1.43
VAPA-203ENST00000577539 SOS2Q07890 1332 aaPredicted RBP6.14□□□□□ -1.43
VAPA-203ENST00000577539 DCCP43146 1447 aa6.13□□□□□ -1.43
VAPA-203ENST00000577539 SMTNL1A8MU46 457 aa6.13□□□□□ -1.43
VAPA-203ENST00000577539 NEMFO60524 1076 aa6.13□□□□□ -1.43
VAPA-203ENST00000577539 WDHD1O75717 1129 aaPredicted RBP6.13□□□□□ -1.43
VAPA-203ENST00000577539 MAP3K10Q02779 954 aa6.13□□□□□ -1.43
VAPA-203ENST00000577539 PNOCQ13519 176 aa6.13□□□□□ -1.43
VAPA-203ENST00000577539 RASGRF1Q13972 1273 aa6.13□□□□□ -1.43
VAPA-203ENST00000577539 NT5DC4Q86YG4 428 aa6.13□□□□□ -1.43
VAPA-203ENST00000577539 UBAC1Q9BSL1 405 aa6.13□□□□□ -1.43
VAPA-203ENST00000577539 ZSWIM5Q9P217 1185 aa6.13□□□□□ -1.43
VAPA-203ENST00000577539 DMGDHQ9UI17 866 aaKnown RBP6.13□□□□□ -1.43
VAPA-203ENST00000577539 NIP7Q9Y221 180 aaKnown RBP eCLIP6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms