RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 CNOT6LQ96LI5 555 aaKnown RBP14.5□□□□□ -0.09
PCDHGB3-201ENST00000576222 DPH5Q9H2P9 285 aa14.5□□□□□ -0.09
PCDHGB3-201ENST00000576222 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.5□□□□□ -0.09
PCDHGB3-201ENST00000576222 RWDD2AQ9UIY3 292 aa14.5□□□□□ -0.09
PCDHGB3-201ENST00000576222 PCDHB6Q9Y5E3 794 aa14.5□□□□□ -0.09
PCDHGB3-201ENST00000576222 GJC1P36383 396 aa14.5□□□□□ -0.09
PCDHGB3-201ENST00000576222 NELFCDQ8IXH7 590 aa14.5□□□□□ -0.09
PCDHGB3-201ENST00000576222 LSM14BQ9BX40 385 aaKnown RBP14.5□□□□□ -0.09
PCDHGB3-201ENST00000576222 IRX2Q9BZI1 471 aaPredicted RBP14.5□□□□□ -0.09
PCDHGB3-201ENST00000576222 EXOC5O00471 708 aa14.5□□□□□ -0.09
PCDHGB3-201ENST00000576222 CHUKO15111 745 aa14.5□□□□□ -0.09
PCDHGB3-201ENST00000576222 HIP1RO75146 1068 aa14.5□□□□□ -0.09
PCDHGB3-201ENST00000576222 H2AFXP16104 143 aaPredicted RBP14.5□□□□□ -0.09
PCDHGB3-201ENST00000576222 VSNL1P62760 191 aa14.5□□□□□ -0.09
PCDHGB3-201ENST00000576222 SLC7A5Q01650 507 aa14.5□□□□□ -0.09
PCDHGB3-201ENST00000576222 HOMER3Q9NSC5 361 aa14.5□□□□□ -0.09
PCDHGB3-201ENST00000576222 NIP7Q9Y221 180 aaKnown RBP eCLIP14.5□□□□□ -0.09
PCDHGB3-201ENST00000576222 AK9Q5TCS8 1911 aa14.49□□□□□ -0.09
PCDHGB3-201ENST00000576222 ADORA1P30542 326 aa14.49□□□□□ -0.09
PCDHGB3-201ENST00000576222 PLCB3Q01970 1234 aa14.49□□□□□ -0.09
PCDHGB3-201ENST00000576222 UBE3CQ15386 1083 aa14.49□□□□□ -0.09
PCDHGB3-201ENST00000576222 BLIDQ8IZY5 108 aa14.49□□□□□ -0.09
PCDHGB3-201ENST00000576222 CCDC197Q8NCU1 140 aa14.49□□□□□ -0.09
PCDHGB3-201ENST00000576222 MGARPQ8TDB4 240 aa14.49□□□□□ -0.09
PCDHGB3-201ENST00000576222 N4BP2L2Q92802 583 aaPredicted RBP14.49□□□□□ -0.09
PCDHGB3-201ENST00000576222 PUS3Q9BZE2 481 aaKnown RBP14.49□□□□□ -0.09
PCDHGB3-201ENST00000576222 SH2B2O14492 632 aaPredicted RBP14.49□□□□□ -0.09
PCDHGB3-201ENST00000576222 SEMA3EO15041 775 aa14.49□□□□□ -0.09
PCDHGB3-201ENST00000576222 PDE8AO60658 829 aa14.49□□□□□ -0.09
PCDHGB3-201ENST00000576222 LONP1P36776 959 aaKnown RBP14.49□□□□□ -0.09
PCDHGB3-201ENST00000576222 ZBED6P86452 979 aa14.49□□□□□ -0.09
PCDHGB3-201ENST00000576222 ZNF658Q5TYW1 1059 aaPredicted RBP14.49□□□□□ -0.09
PCDHGB3-201ENST00000576222 ACTR5Q9H9F9 607 aaPredicted RBP14.49□□□□□ -0.09
PCDHGB3-201ENST00000576222 AMFRQ9UKV5 643 aa14.49□□□□□ -0.09
PCDHGB3-201ENST00000576222 UNC13BO14795 1591 aa14.49□□□□□ -0.09
PCDHGB3-201ENST00000576222 PTPREP23469 700 aa14.49□□□□□ -0.09
PCDHGB3-201ENST00000576222 PTPROQ16827 1216 aa14.49□□□□□ -0.09
PCDHGB3-201ENST00000576222 PAGE5Q96GU1 130 aa14.49□□□□□ -0.09
PCDHGB3-201ENST00000576222 CEP63Q96MT8 703 aa14.49□□□□□ -0.09
PCDHGB3-201ENST00000576222 VCXQ9H320 206 aa14.49□□□□□ -0.09
PCDHGB3-201ENST00000576222 EHMT1Q9H9B1 1298 aa14.49□□□□□ -0.09
PCDHGB3-201ENST00000576222 PSD3Q9NYI0 1048 aa14.49□□□□□ -0.09
PCDHGB3-201ENST00000576222 TBC1D7Q9P0N9 293 aa14.49□□□□□ -0.09
PCDHGB3-201ENST00000576222 PARP3Q9Y6F1 533 aa14.49□□□□□ -0.09
PCDHGB3-201ENST00000576222 PRAMEF22A3QJZ6 481 aa14.49□□□□□ -0.09
PCDHGB3-201ENST00000576222 SRGAP2O75044 1071 aa14.49□□□□□ -0.09
PCDHGB3-201ENST00000576222 EEF2P13639 858 aaKnown RBP14.49□□□□□ -0.09
PCDHGB3-201ENST00000576222 RNF10Q8N5U6 811 aaKnown RBP14.49□□□□□ -0.09
PCDHGB3-201ENST00000576222 TCP11Q8WWU5 503 aa14.49□□□□□ -0.09
PCDHGB3-201ENST00000576222 NHEJ1Q9H9Q4 299 aaPredicted RBP14.49□□□□□ -0.09
PCDHGB3-201ENST00000576222 FHOD1Q9Y613 1164 aa14.49□□□□□ -0.09
PCDHGB3-201ENST00000576222 KAT6BQ8WYB5 2073 aa14.48□□□□□ -0.09
PCDHGB3-201ENST00000576222 MTF1Q14872 753 aa14.48□□□□□ -0.09
PCDHGB3-201ENST00000576222 EPSTI1Q96J88 318 aa14.48□□□□□ -0.09
PCDHGB3-201ENST00000576222 RNF26Q9BY78 433 aaPredicted RBP14.48□□□□□ -0.09
PCDHGB3-201ENST00000576222 RNF14Q9UBS8 474 aa14.48□□□□□ -0.09
PCDHGB3-201ENST00000576222 ASIC3Q9UHC3 531 aa14.48□□□□□ -0.09
PCDHGB3-201ENST00000576222 SHROOM2Q13796 1616 aa14.48□□□□□ -0.09
PCDHGB3-201ENST00000576222 SF3B2Q13435 895 aaKnown RBP14.48□□□□□ -0.09
PCDHGB3-201ENST00000576222 CCDC105Q8IYK2 499 aa14.48□□□□□ -0.09
PCDHGB3-201ENST00000576222 CABLES1Q8TDN4 633 aa14.48□□□□□ -0.09
PCDHGB3-201ENST00000576222 ABHD10Q9NUJ1 306 aa14.48□□□□□ -0.09
PCDHGB3-201ENST00000576222 DENND2AQ9ULE3 1009 aa14.48□□□□□ -0.09
PCDHGB3-201ENST00000576222 TEX33O43247 280 aa14.48□□□□□ -0.09
PCDHGB3-201ENST00000576222 ANKRD42Q8N9B4 389 aa14.48□□□□□ -0.09
PCDHGB3-201ENST00000576222 ARHGEF2Q92974 986 aaKnown RBP14.48□□□□□ -0.09
PCDHGB3-201ENST00000576222 ZSCAN10Q96SZ4 725 aaPredicted RBP14.48□□□□□ -0.09
PCDHGB3-201ENST00000576222 CTTNBP2NLQ9P2B4 639 aa14.48□□□□□ -0.09
PCDHGB3-201ENST00000576222 SERPINA10Q9UK55 444 aa14.48□□□□□ -0.09
PCDHGB3-201ENST00000576222 CCDC169A6NNP5 214 aa14.47□□□□□ -0.09
PCDHGB3-201ENST00000576222 MOCS3O95396 460 aa14.47□□□□□ -0.09
PCDHGB3-201ENST00000576222 SCG2P13521 617 aa14.47□□□□□ -0.09
PCDHGB3-201ENST00000576222 USP14P54578 494 aa14.47□□□□□ -0.09
PCDHGB3-201ENST00000576222 POLR2FP61218 127 aaKnown RBP14.47□□□□□ -0.09
PCDHGB3-201ENST00000576222 PPP2R5EQ16537 467 aa14.47□□□□□ -0.09
PCDHGB3-201ENST00000576222 TTLL7Q6ZT98 887 aa14.47□□□□□ -0.09
PCDHGB3-201ENST00000576222 PUS7LQ9H0K6 701 aaKnown RBP14.47□□□□□ -0.09
PCDHGB3-201ENST00000576222 SLC39A2Q9NP94 309 aa14.47□□□□□ -0.09
PCDHGB3-201ENST00000576222 KLHL14Q9P2G3 628 aa14.47□□□□□ -0.09
PCDHGB3-201ENST00000576222 MRPS25P82663 173 aaKnown RBP14.47□□□□□ -0.09
PCDHGB3-201ENST00000576222 CLUL1Q15846 466 aa14.47□□□□□ -0.09
PCDHGB3-201ENST00000576222 TCP11X2Q5H9J9 407 aa14.47□□□□□ -0.09
PCDHGB3-201ENST00000576222 AP1ARQ63HQ0 302 aa14.47□□□□□ -0.09
PCDHGB3-201ENST00000576222 DHTKD1Q96HY7 919 aaPredicted RBP14.47□□□□□ -0.09
PCDHGB3-201ENST00000576222 STAMBPO95630 424 aa14.47□□□□□ -0.09
PCDHGB3-201ENST00000576222 STX2P32856 288 aa14.47□□□□□ -0.09
PCDHGB3-201ENST00000576222 TCIRG1Q13488 830 aa14.47□□□□□ -0.09
PCDHGB3-201ENST00000576222 PPP2R5AQ15172 486 aa14.47□□□□□ -0.09
PCDHGB3-201ENST00000576222 ARMC9Q7Z3E5 817 aa14.47□□□□□ -0.09
PCDHGB3-201ENST00000576222 USP37Q86T82 979 aa14.47□□□□□ -0.09
PCDHGB3-201ENST00000576222 COG1Q8WTW3 980 aa14.47□□□□□ -0.09
PCDHGB3-201ENST00000576222 NCAPGQ9BPX3 1015 aa14.47□□□□□ -0.09
PCDHGB3-201ENST00000576222 TET3O43151 1660 aa14.46□□□□□ -0.09
PCDHGB3-201ENST00000576222 HLA-DOAP06340 250 aa14.46□□□□□ -0.09
PCDHGB3-201ENST00000576222 ZNF131P52739 623 aa14.46□□□□□ -0.09
PCDHGB3-201ENST00000576222 MRPL12P52815 198 aaKnown RBP14.46□□□□□ -0.09
PCDHGB3-201ENST00000576222 INF2Q27J81 1249 aa14.46□□□□□ -0.09
PCDHGB3-201ENST00000576222 FYB2Q5VWT5 728 aa14.46□□□□□ -0.09
PCDHGB3-201ENST00000576222 HIBCHQ6NVY1 386 aaPredicted RBP14.46□□□□□ -0.09
PCDHGB3-201ENST00000576222 GSPT2Q8IYD1 628 aaKnown RBP14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 116.2 ms