RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 HABP4Q5JVS0 413 aaKnown RBP17.38■□□□□ 0.37
FANCA-220ENST00000566409 CHMP4CQ96CF2 233 aa17.38■□□□□ 0.37
FANCA-220ENST00000566409 MAML3Q96JK9 1138 aa17.38■□□□□ 0.37
FANCA-220ENST00000566409 ZMYM6O95789 1325 aa17.38■□□□□ 0.37
FANCA-220ENST00000566409 TSPY2A6NKD2 308 aa17.37■□□□□ 0.37
FANCA-220ENST00000566409 RANBP6O60518 1105 aaKnown RBP17.37■□□□□ 0.37
FANCA-220ENST00000566409 COL6A1P12109 1028 aa17.37■□□□□ 0.37
FANCA-220ENST00000566409 BMP3P12645 472 aa17.37■□□□□ 0.37
FANCA-220ENST00000566409 PRAMEF19Q5SWL8 479 aa17.37■□□□□ 0.37
FANCA-220ENST00000566409 RASGRP2Q7LDG7 609 aa17.37■□□□□ 0.37
FANCA-220ENST00000566409 KIFC2Q96AC6 838 aa17.37■□□□□ 0.37
FANCA-220ENST00000566409 MMP19Q99542 508 aa17.37■□□□□ 0.37
FANCA-220ENST00000566409 SLC38A10Q9HBR0 1119 aa17.37■□□□□ 0.37
FANCA-220ENST00000566409 FEM1BQ9UK73 627 aa17.37■□□□□ 0.37
FANCA-220ENST00000566409 PFASO15067 1338 aa17.37■□□□□ 0.37
FANCA-220ENST00000566409 ATP2A1O14983 1001 aa17.36■□□□□ 0.37
FANCA-220ENST00000566409 HAND2P61296 217 aa17.36■□□□□ 0.37
FANCA-220ENST00000566409 ZNF792Q3KQV3 632 aa17.36■□□□□ 0.37
FANCA-220ENST00000566409 SNRNP48Q6IEG0 339 aaKnown RBP17.36■□□□□ 0.37
FANCA-220ENST00000566409 CWC27Q6UX04 472 aaKnown RBP17.36■□□□□ 0.37
FANCA-220ENST00000566409 CPXCR1Q8N123 301 aa17.36■□□□□ 0.37
FANCA-220ENST00000566409 TEX13BQ9BXU2 312 aa17.36■□□□□ 0.37
FANCA-220ENST00000566409 C11orf49Q9H6J7 331 aa17.36■□□□□ 0.37
FANCA-220ENST00000566409 DDX20Q9UHI6 824 aaKnown RBP17.36■□□□□ 0.37
FANCA-220ENST00000566409 STX8Q9UNK0 236 aa17.36■□□□□ 0.37
FANCA-220ENST00000566409 LAMA4Q16363 1823 aa17.35■□□□□ 0.37
FANCA-220ENST00000566409 TMEM232C9JQI7 657 aa17.35■□□□□ 0.37
FANCA-220ENST00000566409 EVI5O60447 810 aa17.35■□□□□ 0.37
FANCA-220ENST00000566409 MCCP23508 829 aa17.35■□□□□ 0.37
FANCA-220ENST00000566409 CNGA1P29973 690 aa17.35■□□□□ 0.37
FANCA-220ENST00000566409 TBC1D10CQ8IV04 446 aa17.35■□□□□ 0.37
FANCA-220ENST00000566409 GMCL1Q96IK5 515 aa17.35■□□□□ 0.37
FANCA-220ENST00000566409 RAVER2Q9HCJ3 691 aaKnown RBP17.35■□□□□ 0.37
FANCA-220ENST00000566409 LAMA3Q16787 3333 aa17.35■□□□□ 0.37
FANCA-220ENST00000566409 MCM3APO60318 1980 aa17.34■□□□□ 0.37
FANCA-220ENST00000566409 ZBED4O75132 1171 aa17.34■□□□□ 0.37
FANCA-220ENST00000566409 GSPT1P15170 499 aaKnown RBP17.34■□□□□ 0.37
FANCA-220ENST00000566409 COPB2P35606 906 aa17.34■□□□□ 0.37
FANCA-220ENST00000566409 KCTD2Q14681 263 aa17.34■□□□□ 0.37
FANCA-220ENST00000566409 CHRDL2Q6WN34 429 aa17.34■□□□□ 0.37
FANCA-220ENST00000566409 IL25Q9H293 177 aa17.34■□□□□ 0.37
FANCA-220ENST00000566409 PRO3102Q9H379 93 aa17.34■□□□□ 0.37
FANCA-220ENST00000566409 SLC5A4Q9NY91 659 aa17.34■□□□□ 0.37
FANCA-220ENST00000566409 NR2E3Q9Y5X4 410 aa17.34■□□□□ 0.37
FANCA-220ENST00000566409 ZNF536O15090 1300 aa17.33■□□□□ 0.36
FANCA-220ENST00000566409 DNAJC25-GNG10A0A024R161 153 aa17.33■□□□□ 0.36
FANCA-220ENST00000566409 SLC1A4P43007 532 aa17.33■□□□□ 0.36
FANCA-220ENST00000566409 RRP12Q5JTH9 1297 aaKnown RBP17.33■□□□□ 0.36
FANCA-220ENST00000566409 AKNAD1Q5T1N1 836 aa17.33■□□□□ 0.36
FANCA-220ENST00000566409 ANO1Q5XXA6 986 aa17.33■□□□□ 0.36
FANCA-220ENST00000566409 RCSD1Q6JBY9 416 aa17.33■□□□□ 0.36
FANCA-220ENST00000566409 KCTD1Q719H9 257 aa17.33■□□□□ 0.36
FANCA-220ENST00000566409 STAG1Q8WVM7 1258 aa17.33■□□□□ 0.36
FANCA-220ENST00000566409 TOMM22Q9NS69 142 aa17.33■□□□□ 0.36
FANCA-220ENST00000566409 DIS3Q9Y2L1 958 aaKnown RBP17.33■□□□□ 0.36
FANCA-220ENST00000566409 SEPT4O43236 478 aa17.32■□□□□ 0.36
FANCA-220ENST00000566409 MSCO60682 206 aa17.32■□□□□ 0.36
FANCA-220ENST00000566409 PLA2G6O60733 806 aa17.32■□□□□ 0.36
FANCA-220ENST00000566409 TAL1P17542 331 aaPredicted RBP17.32■□□□□ 0.36
FANCA-220ENST00000566409 SLC4A3P48751 1232 aa17.32■□□□□ 0.36
FANCA-220ENST00000566409 STAT2P52630 851 aa17.32■□□□□ 0.36
FANCA-220ENST00000566409 PPP4R3BQ5MIZ7 849 aa17.32■□□□□ 0.36
FANCA-220ENST00000566409 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.32■□□□□ 0.36
FANCA-220ENST00000566409 TMEM47Q9BQJ4 181 aa17.32■□□□□ 0.36
FANCA-220ENST00000566409 TINF2Q9BSI4 451 aa17.32■□□□□ 0.36
FANCA-220ENST00000566409 DIAPH3Q9NSV4 1193 aa17.32■□□□□ 0.36
FANCA-220ENST00000566409 TCP11L1Q9NUJ3 509 aa17.32■□□□□ 0.36
FANCA-220ENST00000566409 RBM27Q9P2N5 1060 aaKnown RBP17.32■□□□□ 0.36
FANCA-220ENST00000566409 NEDD4P46934 1319 aa17.31■□□□□ 0.36
FANCA-220ENST00000566409 OAZ1P54368 228 aa17.31■□□□□ 0.36
FANCA-220ENST00000566409 MFAP1P55081 439 aaKnown RBP17.31■□□□□ 0.36
FANCA-220ENST00000566409 SNAP25P60880 206 aa17.31■□□□□ 0.36
FANCA-220ENST00000566409 TTC22Q5TAA0 569 aa17.31■□□□□ 0.36
FANCA-220ENST00000566409 MFSD6Q6ZSS7 791 aa17.31■□□□□ 0.36
FANCA-220ENST00000566409 FAM160B2Q86V87 743 aa17.31■□□□□ 0.36
FANCA-220ENST00000566409 C7orf61Q8IZ16 206 aa17.31■□□□□ 0.36
FANCA-220ENST00000566409 CHURC1Q8WUH1 139 aa17.31■□□□□ 0.36
FANCA-220ENST00000566409 FGD4Q96M96 766 aa17.31■□□□□ 0.36
FANCA-220ENST00000566409 AGBL1Q96MI9 1066 aa17.31■□□□□ 0.36
FANCA-220ENST00000566409 PCDH10Q9P2E7 1040 aa17.31■□□□□ 0.36
FANCA-220ENST00000566409 MTMR7Q9Y216 660 aa17.31■□□□□ 0.36
FANCA-220ENST00000566409 HIP1O00291 1037 aa17.3■□□□□ 0.36
FANCA-220ENST00000566409 ZNF865P0CJ78 1059 aaPredicted RBP17.3■□□□□ 0.36
FANCA-220ENST00000566409 TOP1P11387 765 aaKnown RBP17.3■□□□□ 0.36
FANCA-220ENST00000566409 FXR1P51114 621 aaKnown RBP eCLIP17.3■□□□□ 0.36
FANCA-220ENST00000566409 LRRC26Q2I0M4 334 aa17.3■□□□□ 0.36
FANCA-220ENST00000566409 GJC2Q5T442 439 aaPredicted RBP17.3■□□□□ 0.36
FANCA-220ENST00000566409 TTBK2Q6IQ55 1244 aa17.3■□□□□ 0.36
FANCA-220ENST00000566409 PRR12Q9ULL5 1215 aa17.3■□□□□ 0.36
FANCA-220ENST00000566409 ISY1Q9ULR0 285 aaKnown RBP17.3■□□□□ 0.36
FANCA-220ENST00000566409 DNM1LO00429 736 aa17.29■□□□□ 0.36
FANCA-220ENST00000566409 ZNF213O14771 459 aa17.29■□□□□ 0.36
FANCA-220ENST00000566409 SNAI1O95863 264 aaPredicted RBP17.29■□□□□ 0.36
FANCA-220ENST00000566409 FDX1P10109 184 aa17.29■□□□□ 0.36
FANCA-220ENST00000566409 PCP11498 1178 aaKnown RBP17.29■□□□□ 0.36
FANCA-220ENST00000566409 CHST13Q8NET6 341 aa17.29■□□□□ 0.36
FANCA-220ENST00000566409 DCAF4Q8WV16 495 aa17.29■□□□□ 0.36
FANCA-220ENST00000566409 DDX11Q96FC9 970 aa17.29■□□□□ 0.36
FANCA-220ENST00000566409 DSCC1Q9BVC3 393 aa17.29■□□□□ 0.36
FANCA-220ENST00000566409 SENP6Q9GZR1 1112 aaPredicted RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms