RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 GATA6Q92908 595 aa6□□□□□ -1.45
LINC00561-201ENST00000565815 TBX22Q9Y458 520 aa6□□□□□ -1.45
LINC00561-201ENST00000565815 FAM95CA0A1B0GW59 222 aa5.99□□□□□ -1.45
LINC00561-201ENST00000565815 SHISA3A0PJX4 238 aa5.99□□□□□ -1.45
LINC00561-201ENST00000565815 EOMESO95936 686 aa5.99□□□□□ -1.45
LINC00561-201ENST00000565815 FAM87AP0C7U9 286 aa5.99□□□□□ -1.45
LINC00561-201ENST00000565815 LEMD3Q9Y2U8 911 aa5.99□□□□□ -1.45
LINC00561-201ENST00000565815 C9orf172C9J069 976 aa5.99□□□□□ -1.45
LINC00561-201ENST00000565815 MEIS1O00470 390 aa5.99□□□□□ -1.45
LINC00561-201ENST00000565815 GBP1P32455 592 aa5.99□□□□□ -1.45
LINC00561-201ENST00000565815 BRF1Q92994 677 aa5.99□□□□□ -1.45
LINC00561-201ENST00000565815 FOXQ1Q9C009 403 aa5.99□□□□□ -1.45
LINC00561-201ENST00000565815 LRRC7Q96NW7 1537 aa5.99□□□□□ -1.45
LINC00561-201ENST00000565815 RGS13O14921 159 aa5.98□□□□□ -1.45
LINC00561-201ENST00000565815 CST3P01034 146 aaPredicted RBP5.98□□□□□ -1.45
LINC00561-201ENST00000565815 IMPDH2P12268 514 aa5.98□□□□□ -1.45
LINC00561-201ENST00000565815 YARSP54577 528 aaKnown RBP5.98□□□□□ -1.45
LINC00561-201ENST00000565815 EZH1Q92800 747 aaPredicted RBP5.98□□□□□ -1.45
LINC00561-201ENST00000565815 HEXIM2Q96MH2 286 aaKnown RBP5.98□□□□□ -1.45
LINC00561-201ENST00000565815 MKRN2Q9H000 416 aaKnown RBP5.98□□□□□ -1.45
LINC00561-201ENST00000565815 C7orf69Q9H7B7 122 aa5.98□□□□□ -1.45
LINC00561-201ENST00000565815 SUSD2Q9UGT4 822 aa5.98□□□□□ -1.45
LINC00561-201ENST00000565815 IQGAP1P46940 1657 aa5.98□□□□□ -1.45
LINC00561-201ENST00000565815 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.98□□□□□ -1.45
LINC00561-201ENST00000565815 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.98□□□□□ -1.45
LINC00561-201ENST00000565815 DOC2BQ14184 412 aa5.98□□□□□ -1.45
LINC00561-201ENST00000565815 TCEAL1Q15170 157 aa5.98□□□□□ -1.45
LINC00561-201ENST00000565815 TNNI3KQ59H18 835 aa5.98□□□□□ -1.45
LINC00561-201ENST00000565815 HP1BP3Q5SSJ5 553 aaPredicted RBP5.98□□□□□ -1.45
LINC00561-201ENST00000565815 SLC6A19Q695T7 634 aa5.98□□□□□ -1.45
LINC00561-201ENST00000565815 ZNF746Q6NUN9 644 aaPredicted RBP5.98□□□□□ -1.45
LINC00561-201ENST00000565815 Q96M66 194 aa5.98□□□□□ -1.45
LINC00561-201ENST00000565815 HAUS7Q99871 368 aa5.98□□□□□ -1.45
LINC00561-201ENST00000565815 ZNF214Q9UL59 606 aaPredicted RBP5.98□□□□□ -1.45
LINC00561-201ENST00000565815 SYNGAP1Q96PV0 1343 aa5.98□□□□□ -1.45
LINC00561-201ENST00000565815 DHX29Q7Z478 1369 aaKnown RBP5.98□□□□□ -1.45
LINC00561-201ENST00000565815 MIA2Q96PC5 1412 aa5.98□□□□□ -1.45
LINC00561-201ENST00000565815 CDK12Q9NYV4 1490 aaPredicted RBP5.98□□□□□ -1.45
LINC00561-201ENST00000565815 U2SURPO15042 1029 aaKnown RBP5.97□□□□□ -1.45
LINC00561-201ENST00000565815 LRIG2O94898 1065 aa5.97□□□□□ -1.45
LINC00561-201ENST00000565815 SF1Q15637 639 aaKnown RBP5.97□□□□□ -1.45
LINC00561-201ENST00000565815 TMC3Q7Z5M5 1100 aa5.97□□□□□ -1.45
LINC00561-201ENST00000565815 SH3TC2Q8TF17 1288 aa5.97□□□□□ -1.45
LINC00561-201ENST00000565815 PPP1R14AQ96A00 147 aa5.97□□□□□ -1.45
LINC00561-201ENST00000565815 RNPC3Q96LT9 517 aaKnown RBP5.97□□□□□ -1.45
LINC00561-201ENST00000565815 TBC1D32Q96NH3 1257 aa5.97□□□□□ -1.45
LINC00561-201ENST00000565815 CEP41Q9BYV8 373 aa5.97□□□□□ -1.45
LINC00561-201ENST00000565815 PRDM10Q9NQV6 1147 aa5.97□□□□□ -1.45
LINC00561-201ENST00000565815 CASKIN1Q8WXD9 1431 aa5.97□□□□□ -1.45
LINC00561-201ENST00000565815 PDPK1O15530 556 aa5.97□□□□□ -1.45
LINC00561-201ENST00000565815 RASSF7Q02833 373 aa5.97□□□□□ -1.45
LINC00561-201ENST00000565815 FOXB2Q5VYV0 432 aa5.97□□□□□ -1.45
LINC00561-201ENST00000565815 VWCEQ96DN2 955 aa5.97□□□□□ -1.45
LINC00561-201ENST00000565815 CCDC74BQ96LY2 380 aa5.97□□□□□ -1.45
LINC00561-201ENST00000565815 PCOLCE2Q9UKZ9 415 aa5.97□□□□□ -1.45
LINC00561-201ENST00000565815 UGGT1Q9NYU2 1555 aa5.97□□□□□ -1.45
LINC00561-201ENST00000565815 ALKQ9UM73 1620 aa5.97□□□□□ -1.45
LINC00561-201ENST00000565815 CDC42BPAQ5VT25 1732 aa5.97□□□□□ -1.45
LINC00561-201ENST00000565815 FXNQ16595 210 aa5.97□□□□□ -1.45
LINC00561-201ENST00000565815 C21orf62-AS1Q17RA5 79 aa5.97□□□□□ -1.45
LINC00561-201ENST00000565815 SLC10A6Q3KNW5 377 aa5.97□□□□□ -1.45
LINC00561-201ENST00000565815 TKFCQ3LXA3 575 aa5.97□□□□□ -1.45
LINC00561-201ENST00000565815 MTERF2Q49AM1 385 aa5.97□□□□□ -1.45
LINC00561-201ENST00000565815 ZNF772Q68DY9 489 aaPredicted RBP5.97□□□□□ -1.45
LINC00561-201ENST00000565815 KREMEN1Q96MU8 473 aa5.97□□□□□ -1.45
LINC00561-201ENST00000565815 SUCOQ9UBS9 1254 aaKnown RBP5.97□□□□□ -1.45
LINC00561-201ENST00000565815 ZNF451Q9Y4E5 1061 aa5.97□□□□□ -1.45
LINC00561-201ENST00000565815 ESYT3A0FGR9 886 aa5.96□□□□□ -1.46
LINC00561-201ENST00000565815 CLEC3AO75596 197 aa5.96□□□□□ -1.46
LINC00561-201ENST00000565815 SQSTM1Q13501 440 aa5.96□□□□□ -1.46
LINC00561-201ENST00000565815 TPX2Q9ULW0 747 aaKnown RBP5.96□□□□□ -1.46
LINC00561-201ENST00000565815 ZC3H13Q5T200 1668 aaKnown RBP5.96□□□□□ -1.46
LINC00561-201ENST00000565815 CBX7O95931 251 aa5.96□□□□□ -1.46
LINC00561-201ENST00000565815 LRRFIP1Q32MZ4 808 aaKnown RBP5.96□□□□□ -1.46
LINC00561-201ENST00000565815 RGS17Q9UGC6 210 aaPredicted RBP5.96□□□□□ -1.46
LINC00561-201ENST00000565815 ABCC3O15438 1527 aa5.95□□□□□ -1.46
LINC00561-201ENST00000565815 PIK3R2O00459 728 aa5.95□□□□□ -1.46
LINC00561-201ENST00000565815 SUSD5O60279 629 aa5.95□□□□□ -1.46
LINC00561-201ENST00000565815 ITIH2P19823 946 aa5.95□□□□□ -1.46
LINC00561-201ENST00000565815 NBPF12Q5TAG4 269 aaPredicted RBP5.95□□□□□ -1.46
LINC00561-201ENST00000565815 C19orf47Q8N9M1 422 aaKnown RBP5.95□□□□□ -1.46
LINC00561-201ENST00000565815 FGD6Q6ZV73 1430 aa5.95□□□□□ -1.46
LINC00561-201ENST00000565815 NCOA3Q9Y6Q9 1424 aa5.95□□□□□ -1.46
LINC00561-201ENST00000565815 SPATA31A6Q5VVP1 1343 aa5.95□□□□□ -1.46
LINC00561-201ENST00000565815 F13BP05160 661 aa5.95□□□□□ -1.46
LINC00561-201ENST00000565815 SLC7A5Q01650 507 aa5.95□□□□□ -1.46
LINC00561-201ENST00000565815 INTS3Q68E01 1043 aaKnown RBP5.95□□□□□ -1.46
LINC00561-201ENST00000565815 GGT6Q6P531 493 aa5.95□□□□□ -1.46
LINC00561-201ENST00000565815 CCDC144CPQ8IYA2 1237 aa5.95□□□□□ -1.46
LINC00561-201ENST00000565815 SIRPGQ9P1W8 387 aa5.95□□□□□ -1.46
LINC00561-201ENST00000565815 SYCP2Q9BX26 1530 aa5.95□□□□□ -1.46
LINC00561-201ENST00000565815 FYCO1Q9BQS8 1478 aa5.95□□□□□ -1.46
LINC00561-201ENST00000565815 JCADQ9P266 1359 aa5.94□□□□□ -1.46
LINC00561-201ENST00000565815 KDM2BQ8NHM5 1336 aa5.94□□□□□ -1.46
LINC00561-201ENST00000565815 PROCP04070 461 aa5.94□□□□□ -1.46
LINC00561-201ENST00000565815 CD96P40200 585 aa5.94□□□□□ -1.46
LINC00561-201ENST00000565815 PMS1P54277 932 aaKnown RBP5.94□□□□□ -1.46
LINC00561-201ENST00000565815 CBX2Q14781 532 aaPredicted RBP5.94□□□□□ -1.46
LINC00561-201ENST00000565815 ZNF513Q8N8E2 541 aaPredicted RBP5.94□□□□□ -1.46
LINC00561-201ENST00000565815 NACC1Q96RE7 527 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms