RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 PCDHA5Q9Y5H7 936 aa5.79□□□□□ -1.48
HDGFL3-202ENST00000562702 PRR36Q9H6K5 1346 aa5.78□□□□□ -1.48
HDGFL3-202ENST00000562702 NUDT19A8MXV4 375 aa5.78□□□□□ -1.48
HDGFL3-202ENST00000562702 CHURC1-FNTBB4DL54 471 aa5.78□□□□□ -1.48
HDGFL3-202ENST00000562702 EFEMP2O95967 443 aa5.78□□□□□ -1.48
HDGFL3-202ENST00000562702 CYP4F8P98187 520 aa5.78□□□□□ -1.48
HDGFL3-202ENST00000562702 KCNA1Q09470 495 aa5.78□□□□□ -1.48
HDGFL3-202ENST00000562702 TARBP2Q15633 366 aaKnown RBP5.78□□□□□ -1.48
HDGFL3-202ENST00000562702 HHIPL2Q6UWX4 724 aa5.78□□□□□ -1.48
HDGFL3-202ENST00000562702 GATAD2BQ8WXI9 593 aa5.78□□□□□ -1.48
HDGFL3-202ENST00000562702 KIF2CQ99661 725 aa5.78□□□□□ -1.48
HDGFL3-202ENST00000562702 A0A1W2PQ27 194 aa5.77□□□□□ -1.49
HDGFL3-202ENST00000562702 A0A1W2PQ64 194 aa5.77□□□□□ -1.49
HDGFL3-202ENST00000562702 A0A1W2PQC6 194 aa5.77□□□□□ -1.49
HDGFL3-202ENST00000562702 A0A1W2PQD8 194 aa5.77□□□□□ -1.49
HDGFL3-202ENST00000562702 TMEM82A0PJX8 343 aa5.77□□□□□ -1.49
HDGFL3-202ENST00000562702 HTR3BO95264 441 aa5.77□□□□□ -1.49
HDGFL3-202ENST00000562702 PRKCAP17252 672 aa5.77□□□□□ -1.49
HDGFL3-202ENST00000562702 SLURP1P55000 103 aa5.77□□□□□ -1.49
HDGFL3-202ENST00000562702 NR1I3Q14994 352 aa5.77□□□□□ -1.49
HDGFL3-202ENST00000562702 HSF5Q4G112 596 aaPredicted RBP5.77□□□□□ -1.49
HDGFL3-202ENST00000562702 AEBP1Q8IUX7 1158 aa5.77□□□□□ -1.49
HDGFL3-202ENST00000562702 PHC3Q8NDX5 983 aa5.77□□□□□ -1.49
HDGFL3-202ENST00000562702 PLCD4Q9BRC7 762 aa5.77□□□□□ -1.49
HDGFL3-202ENST00000562702 A0A1W2PQ45 241 aaPredicted RBP5.76□□□□□ -1.49
HDGFL3-202ENST00000562702 A0A1W2PQY0 241 aa5.76□□□□□ -1.49
HDGFL3-202ENST00000562702 FADS2P1A8MWK0 482 aa5.76□□□□□ -1.49
HDGFL3-202ENST00000562702 RGS13O14921 159 aa5.76□□□□□ -1.49
HDGFL3-202ENST00000562702 RAG1P15918 1043 aa5.76□□□□□ -1.49
HDGFL3-202ENST00000562702 LMNB2Q03252 620 aa5.76□□□□□ -1.49
HDGFL3-202ENST00000562702 RAD51AP2Q09MP3 1159 aa5.76□□□□□ -1.49
HDGFL3-202ENST00000562702 TAF1CQ15572 869 aaPredicted RBP5.76□□□□□ -1.49
HDGFL3-202ENST00000562702 ZC3H14Q6PJT7 736 aaKnown RBP5.76□□□□□ -1.49
HDGFL3-202ENST00000562702 BNC2Q6ZN30 1099 aaPredicted RBP5.76□□□□□ -1.49
HDGFL3-202ENST00000562702 TP53I13Q8NBR0 393 aaPredicted RBP5.76□□□□□ -1.49
HDGFL3-202ENST00000562702 NUP43Q8NFH3 380 aa5.76□□□□□ -1.49
HDGFL3-202ENST00000562702 SRRDQ9UH36 339 aa5.76□□□□□ -1.49
HDGFL3-202ENST00000562702 GPR55Q9Y2T6 319 aaPredicted RBP5.76□□□□□ -1.49
HDGFL3-202ENST00000562702 ST13P50502 369 aaKnown RBP5.75□□□□□ -1.49
HDGFL3-202ENST00000562702 NCKAP1LP55160 1127 aa5.75□□□□□ -1.49
HDGFL3-202ENST00000562702 CAMK2GQ13555 558 aaPredicted RBP5.75□□□□□ -1.49
HDGFL3-202ENST00000562702 CBX2Q14781 532 aaPredicted RBP5.75□□□□□ -1.49
HDGFL3-202ENST00000562702 BBS9Q3SYG4 887 aa5.75□□□□□ -1.49
HDGFL3-202ENST00000562702 VWCEQ96DN2 955 aa5.75□□□□□ -1.49
HDGFL3-202ENST00000562702 FAM221AA4D161 298 aa5.74□□□□□ -1.49
HDGFL3-202ENST00000562702 FFAR3O14843 346 aa5.74□□□□□ -1.49
HDGFL3-202ENST00000562702 PRICKLE3O43900 615 aaPredicted RBP5.74□□□□□ -1.49
HDGFL3-202ENST00000562702 GRIN3BO60391 1043 aa5.74□□□□□ -1.49
HDGFL3-202ENST00000562702 F13A1P00488 732 aa5.74□□□□□ -1.49
HDGFL3-202ENST00000562702 MAPKAPK2P49137 400 aa5.74□□□□□ -1.49
HDGFL3-202ENST00000562702 NBPF9Q3BBW0 867 aa5.74□□□□□ -1.49
HDGFL3-202ENST00000562702 MEI1Q5TIA1 1274 aa5.74□□□□□ -1.49
HDGFL3-202ENST00000562702 TMC3Q7Z5M5 1100 aa5.74□□□□□ -1.49
HDGFL3-202ENST00000562702 CDADC1Q9BWV3 514 aa5.74□□□□□ -1.49
HDGFL3-202ENST00000562702 TNFRSF12AQ9NP84 129 aa5.74□□□□□ -1.49
HDGFL3-202ENST00000562702 ACSL6Q9UKU0 697 aa5.74□□□□□ -1.49
HDGFL3-202ENST00000562702 A0A1W2PQJ5 194 aa5.73□□□□□ -1.49
HDGFL3-202ENST00000562702 SUV39H1O43463 412 aa5.73□□□□□ -1.49
HDGFL3-202ENST00000562702 SIGLEC6O43699 453 aa5.73□□□□□ -1.49
HDGFL3-202ENST00000562702 PRAMEF1O95521 474 aa5.73□□□□□ -1.49
HDGFL3-202ENST00000562702 MAGEA10P43363 369 aaPredicted RBP5.73□□□□□ -1.49
HDGFL3-202ENST00000562702 PWP1Q13610 501 aa5.73□□□□□ -1.49
HDGFL3-202ENST00000562702 NT5DC1Q5TFE4 455 aa5.73□□□□□ -1.49
HDGFL3-202ENST00000562702 ZPBP2Q6X784 338 aa5.73□□□□□ -1.49
HDGFL3-202ENST00000562702 RPTNQ6XPR3 784 aa5.73□□□□□ -1.49
HDGFL3-202ENST00000562702 SLCO6A1Q86UG4 719 aa5.73□□□□□ -1.49
HDGFL3-202ENST00000562702 RELL1Q8IUW5 271 aa5.73□□□□□ -1.49
HDGFL3-202ENST00000562702 SUSD2Q9UGT4 822 aa5.73□□□□□ -1.49
HDGFL3-202ENST00000562702 FAN1Q9Y2M0 1017 aa5.73□□□□□ -1.49
HDGFL3-202ENST00000562702 IVNS1ABPQ9Y6Y0 642 aa5.73□□□□□ -1.49
HDGFL3-202ENST00000562702 MSL3P1P0C860 447 aa5.72□□□□□ -1.49
HDGFL3-202ENST00000562702 LIMS1P48059 325 aa5.72□□□□□ -1.49
HDGFL3-202ENST00000562702 ZXDAP98168 799 aa5.72□□□□□ -1.49
HDGFL3-202ENST00000562702 ZNF200P98182 395 aaPredicted RBP5.72□□□□□ -1.49
HDGFL3-202ENST00000562702 MPP2Q14168 576 aa5.72□□□□□ -1.49
HDGFL3-202ENST00000562702 PLEKHN1Q494U1 663 aaPredicted RBP5.72□□□□□ -1.49
HDGFL3-202ENST00000562702 NBPF12Q5TAG4 269 aaPredicted RBP5.72□□□□□ -1.49
HDGFL3-202ENST00000562702 LSRQ86X29 649 aaPredicted RBP5.72□□□□□ -1.49
HDGFL3-202ENST00000562702 DUSP9Q99956 384 aaKnown RBP5.72□□□□□ -1.49
HDGFL3-202ENST00000562702 CHST7Q9NS84 486 aa5.72□□□□□ -1.49
HDGFL3-202ENST00000562702 PMF1-BGLAPU3KQ54 211 aa5.72□□□□□ -1.49
HDGFL3-202ENST00000562702 IRS2Q9Y4H2 1338 aa5.72□□□□□ -1.49
HDGFL3-202ENST00000562702 AKAP8O43823 692 aaKnown RBP5.71□□□□□ -1.5
HDGFL3-202ENST00000562702 PF4P02776 101 aa5.71□□□□□ -1.5
HDGFL3-202ENST00000562702 IGFBP6P24592 240 aaPredicted RBP5.71□□□□□ -1.5
HDGFL3-202ENST00000562702 ARSHQ5FYA8 562 aa5.71□□□□□ -1.5
HDGFL3-202ENST00000562702 SNAP47Q5SQN1 464 aa5.71□□□□□ -1.5
HDGFL3-202ENST00000562702 LIPIQ6XZB0 460 aa5.71□□□□□ -1.5
HDGFL3-202ENST00000562702 FERMT3Q86UX7 667 aa5.71□□□□□ -1.5
HDGFL3-202ENST00000562702 SMPD4Q9NXE4 827 aa5.71□□□□□ -1.5
HDGFL3-202ENST00000562702 CLEC3AO75596 197 aa5.7□□□□□ -1.5
HDGFL3-202ENST00000562702 UBOX5O94941 541 aa5.7□□□□□ -1.5
HDGFL3-202ENST00000562702 GBP2P32456 591 aaPredicted RBP5.7□□□□□ -1.5
HDGFL3-202ENST00000562702 BMP8BP34820 402 aa5.7□□□□□ -1.5
HDGFL3-202ENST00000562702 GJA9P57773 515 aa5.7□□□□□ -1.5
HDGFL3-202ENST00000562702 PSMD2Q13200 908 aa5.7□□□□□ -1.5
HDGFL3-202ENST00000562702 KIR3DS1Q14943 382 aa5.7□□□□□ -1.5
HDGFL3-202ENST00000562702 EAPPQ56P03 285 aaPredicted RBP5.7□□□□□ -1.5
HDGFL3-202ENST00000562702 REC114Q7Z4M0 266 aa5.7□□□□□ -1.5
HDGFL3-202ENST00000562702 JAMLQ86YT9 394 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms