RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 NAT2P11245 290 aa7.45□□□□□ -1.22
USP8-218ENST00000561330 BMP8BP34820 402 aa7.45□□□□□ -1.22
USP8-218ENST00000561330 RALGPS1Q5JS13 557 aa7.45□□□□□ -1.22
USP8-218ENST00000561330 C6orf15Q6UXA7 325 aaPredicted RBP7.45□□□□□ -1.22
USP8-218ENST00000561330 FAM178BQ8IXR5 827 aa7.45□□□□□ -1.22
USP8-218ENST00000561330 FGD4Q96M96 766 aa7.45□□□□□ -1.22
USP8-218ENST00000561330 DIS3Q9Y2L1 958 aaKnown RBP7.45□□□□□ -1.22
USP8-218ENST00000561330 BIN1O00499 593 aa7.44□□□□□ -1.22
USP8-218ENST00000561330 RPL10P27635 214 aaKnown RBP7.44□□□□□ -1.22
USP8-218ENST00000561330 GDNFP39905 211 aa7.44□□□□□ -1.22
USP8-218ENST00000561330 CTSKP43235 329 aa7.44□□□□□ -1.22
USP8-218ENST00000561330 SF3A1Q15459 793 aaKnown RBP7.44□□□□□ -1.22
USP8-218ENST00000561330 CRTC3Q6UUV7 619 aa7.44□□□□□ -1.22
USP8-218ENST00000561330 ATG4DQ86TL0 474 aaPredicted RBP7.44□□□□□ -1.22
USP8-218ENST00000561330 CKAP2LQ8IYA6 745 aa7.44□□□□□ -1.22
USP8-218ENST00000561330 ADCY4Q8NFM4 1077 aa7.44□□□□□ -1.22
USP8-218ENST00000561330 NOL6Q9H6R4 1146 aaKnown RBP7.44□□□□□ -1.22
USP8-218ENST00000561330 CTNND2Q9UQB3 1225 aa7.44□□□□□ -1.22
USP8-218ENST00000561330 SF3B6Q9Y3B4 125 aaKnown RBP7.44□□□□□ -1.22
USP8-218ENST00000561330 H0Y8X5 98 aa7.43□□□□□ -1.22
USP8-218ENST00000561330 FKTNO75072 461 aa7.43□□□□□ -1.22
USP8-218ENST00000561330 VAV1P15498 845 aa7.43□□□□□ -1.22
USP8-218ENST00000561330 GTF2F1P35269 517 aaKnown RBP eCLIP7.43□□□□□ -1.22
USP8-218ENST00000561330 HK2P52789 917 aa7.43□□□□□ -1.22
USP8-218ENST00000561330 PPP2R5DQ14738 602 aa7.43□□□□□ -1.22
USP8-218ENST00000561330 WAPLQ7Z5K2 1190 aa7.43□□□□□ -1.22
USP8-218ENST00000561330 FLAD1Q8NFF5 587 aa7.43□□□□□ -1.22
USP8-218ENST00000561330 MICAL1Q8TDZ2 1067 aa7.43□□□□□ -1.22
USP8-218ENST00000561330 APBA2Q99767 749 aa7.43□□□□□ -1.22
USP8-218ENST00000561330 TRIM55Q9BYV6 548 aa7.43□□□□□ -1.22
USP8-218ENST00000561330 SUSD2Q9UGT4 822 aa7.43□□□□□ -1.22
USP8-218ENST00000561330 SUGT1Q9Y2Z0 365 aa7.43□□□□□ -1.22
USP8-218ENST00000561330 B2RBV5 119 aa7.42□□□□□ -1.22
USP8-218ENST00000561330 KLF4O43474 513 aa7.42□□□□□ -1.22
USP8-218ENST00000561330 ZGLP1P0C6A0 271 aa7.42□□□□□ -1.22
USP8-218ENST00000561330 TAL1P17542 331 aaPredicted RBP7.42□□□□□ -1.22
USP8-218ENST00000561330 ENDOUP21128 410 aaKnown RBP7.42□□□□□ -1.22
USP8-218ENST00000561330 AFMP43652 599 aa7.42□□□□□ -1.22
USP8-218ENST00000561330 ZNF143P52747 638 aaPredicted RBP7.42□□□□□ -1.22
USP8-218ENST00000561330 DUSP4Q13115 394 aa7.42□□□□□ -1.22
USP8-218ENST00000561330 ARMC5Q96C12 935 aa7.42□□□□□ -1.22
USP8-218ENST00000561330 ZDHHC15Q96MV8 337 aa7.42□□□□□ -1.22
USP8-218ENST00000561330 ST7Q9NRC1 585 aa7.42□□□□□ -1.22
USP8-218ENST00000561330 C19orf73Q9NVV2 129 aa7.42□□□□□ -1.22
USP8-218ENST00000561330 ZMYM5Q9UJ78 669 aa7.42□□□□□ -1.22
USP8-218ENST00000561330 ZNF281Q9Y2X9 895 aa7.42□□□□□ -1.22
USP8-218ENST00000561330 ZNF205O95201 554 aa7.41□□□□□ -1.22
USP8-218ENST00000561330 RAC2P15153 192 aa7.41□□□□□ -1.22
USP8-218ENST00000561330 ITGB5P18084 799 aa7.41□□□□□ -1.22
USP8-218ENST00000561330 NOP2P46087 812 aaKnown RBP7.41□□□□□ -1.22
USP8-218ENST00000561330 POU4F1Q01851 419 aa7.41□□□□□ -1.22
USP8-218ENST00000561330 RAB33AQ14088 237 aa7.41□□□□□ -1.22
USP8-218ENST00000561330 CELF2-AS1Q8N7Q2 184 aa7.41□□□□□ -1.22
USP8-218ENST00000561330 HIRIP3Q9BW71 556 aaPredicted RBP7.41□□□□□ -1.22
USP8-218ENST00000561330 TMEM82A0PJX8 343 aa7.4□□□□□ -1.22
USP8-218ENST00000561330 U2SURPO15042 1029 aaKnown RBP7.4□□□□□ -1.22
USP8-218ENST00000561330 GJB6O95452 261 aa7.4□□□□□ -1.22
USP8-218ENST00000561330 JUNBP17275 347 aaPredicted RBP7.4□□□□□ -1.22
USP8-218ENST00000561330 DDR2Q16832 855 aa7.4□□□□□ -1.22
USP8-218ENST00000561330 MCTP1Q6DN14 999 aa7.4□□□□□ -1.22
USP8-218ENST00000561330 SPPL2CQ8IUH8 684 aa7.4□□□□□ -1.22
USP8-218ENST00000561330 ARHGEF39Q8N4T4 335 aa7.4□□□□□ -1.22
USP8-218ENST00000561330 OXR1Q8N573 874 aa7.4□□□□□ -1.22
USP8-218ENST00000561330 PDZD8Q8NEN9 1154 aa7.4□□□□□ -1.22
USP8-218ENST00000561330 SREK1Q8WXA9 508 aaKnown RBP7.4□□□□□ -1.22
USP8-218ENST00000561330 RCC1LQ96I51 464 aaKnown RBP7.4□□□□□ -1.22
USP8-218ENST00000561330 CDADC1Q9BWV3 514 aa7.4□□□□□ -1.22
USP8-218ENST00000561330 APEX2Q9UBZ4 518 aa7.4□□□□□ -1.22
USP8-218ENST00000561330 CGGBP1Q9UFW8 167 aaPredicted RBP7.4□□□□□ -1.22
USP8-218ENST00000561330 AKT3Q9Y243 479 aa7.4□□□□□ -1.22
USP8-218ENST00000561330 NOP56O00567 594 aaKnown RBP7.39□□□□□ -1.23
USP8-218ENST00000561330 CD3EP07766 207 aa7.39□□□□□ -1.23
USP8-218ENST00000561330 GSTM1P09488 218 aa7.39□□□□□ -1.23
USP8-218ENST00000561330 CHRNEQ04844 493 aa7.39□□□□□ -1.23
USP8-218ENST00000561330 SV2CQ496J9 727 aa7.39□□□□□ -1.23
USP8-218ENST00000561330 NBPF6Q5VWK0 638 aa7.39□□□□□ -1.23
USP8-218ENST00000561330 ZPBP2Q6X784 338 aa7.39□□□□□ -1.23
USP8-218ENST00000561330 EEPD1Q7L9B9 569 aa7.39□□□□□ -1.23
USP8-218ENST00000561330 ANKS4BQ8N8V4 417 aa7.39□□□□□ -1.23
USP8-218ENST00000561330 LINC01599Q8WXQ3 324 aa7.39□□□□□ -1.23
USP8-218ENST00000561330 PPP1R14AQ96A00 147 aa7.39□□□□□ -1.23
USP8-218ENST00000561330 NBPF4Q96M43 638 aa7.39□□□□□ -1.23
USP8-218ENST00000561330 G6PC3Q9BUM1 346 aa7.39□□□□□ -1.23
USP8-218ENST00000561330 SLC12A9Q9BXP2 914 aa7.39□□□□□ -1.23
USP8-218ENST00000561330 SUSD5O60279 629 aa7.38□□□□□ -1.23
USP8-218ENST00000561330 PAPLNO95428 1278 aa7.38□□□□□ -1.23
USP8-218ENST00000561330 HPXP02790 462 aa7.38□□□□□ -1.23
USP8-218ENST00000561330 GRB10Q13322 594 aa7.38□□□□□ -1.23
USP8-218ENST00000561330 RTP2Q5QGT7 225 aa7.38□□□□□ -1.23
USP8-218ENST00000561330 MRM1Q6IN84 353 aaKnown RBP7.38□□□□□ -1.23
USP8-218ENST00000561330 POMZP3Q6PJE2 187 aa7.38□□□□□ -1.23
USP8-218ENST00000561330 CRACR2BQ8N4Y2 399 aaPredicted RBP7.38□□□□□ -1.23
USP8-218ENST00000561330 ZNF513Q8N8E2 541 aaPredicted RBP7.38□□□□□ -1.23
USP8-218ENST00000561330 BVESQ8NE79 360 aa7.38□□□□□ -1.23
USP8-218ENST00000561330 MYLIPQ8WY64 445 aa7.38□□□□□ -1.23
USP8-218ENST00000561330 KIRREL1Q96J84 757 aa7.38□□□□□ -1.23
USP8-218ENST00000561330 MAP6Q96JE9 813 aa7.38□□□□□ -1.23
USP8-218ENST00000561330 FCRL2Q96LA5 508 aaPredicted RBP7.38□□□□□ -1.23
USP8-218ENST00000561330 KRTAP4-8Q9BYQ9 185 aa7.38□□□□□ -1.23
USP8-218ENST00000561330 AP5S1Q9NUS5 200 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms