RNA–Protein interactions for RNA: ENST00000560428.1

TNFAIP2-206, Transcript of TNF alpha induced protein 2, humanhuman

TSL 5

Gene TNFAIP2, Length 773 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-206ENST00000560428 GMCL1Q96IK5 515 aa21.32■■□□□ 1
TNFAIP2-206ENST00000560428 MAML3Q96JK9 1138 aa21.32■■□□□ 1
TNFAIP2-206ENST00000560428 DDX20Q9UHI6 824 aaKnown RBP21.32■■□□□ 1
TNFAIP2-206ENST00000560428 HIP1O00291 1037 aa21.31■■□□□ 1
TNFAIP2-206ENST00000560428 ZBED4O75132 1171 aa21.31■■□□□ 1
TNFAIP2-206ENST00000560428 FDX1P10109 184 aa21.31■■□□□ 1
TNFAIP2-206ENST00000560428 NOVP48745 357 aa21.31■■□□□ 1
TNFAIP2-206ENST00000560428 SLC38A10Q9HBR0 1119 aa21.31■■□□□ 1
TNFAIP2-206ENST00000560428 IL17RBQ9NRM6 502 aa21.31■■□□□ 1
TNFAIP2-206ENST00000560428 STX8Q9UNK0 236 aa21.31■■□□□ 1
TNFAIP2-206ENST00000560428 DIS3Q9Y2L1 958 aaKnown RBP21.31■■□□□ 1
TNFAIP2-206ENST00000560428 TACC3Q9Y6A5 838 aa21.31■■□□□ 1
TNFAIP2-206ENST00000560428 RANBP6O60518 1105 aaKnown RBP21.3■■□□□ 1
TNFAIP2-206ENST00000560428 PCP11498 1178 aaKnown RBP21.3■■□□□ 1
TNFAIP2-206ENST00000560428 COL6A1P12109 1028 aa21.3■■□□□ 1
TNFAIP2-206ENST00000560428 CNGA1P29973 690 aa21.3■■□□□ 1
TNFAIP2-206ENST00000560428 OAZ1P54368 228 aa21.3■■□□□ 1
TNFAIP2-206ENST00000560428 SNRNP48Q6IEG0 339 aaKnown RBP21.3■■□□□ 1
TNFAIP2-206ENST00000560428 TRPV1Q8NER1 839 aa21.3■■□□□ 1
TNFAIP2-206ENST00000560428 KIFC2Q96AC6 838 aa21.3■■□□□ 1
TNFAIP2-206ENST00000560428 INCENPQ9NQS7 918 aa21.3■■□□□ 1
TNFAIP2-206ENST00000560428 COLQQ9Y215 455 aaPredicted RBP21.3■■□□□ 1
TNFAIP2-206ENST00000560428 CTDP1Q9Y5B0 961 aaPredicted RBP21.3■■□□□ 1
TNFAIP2-206ENST00000560428 PLXNA1Q9UIW2 1896 aa21.3■■□□□ 1
TNFAIP2-206ENST00000560428 STAT2P52630 851 aa21.29■■□□□ 1
TNFAIP2-206ENST00000560428 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.29■■□□□ 1
TNFAIP2-206ENST00000560428 DIAPH3Q9NSV4 1193 aa21.29■■□□□ 1
TNFAIP2-206ENST00000560428 NRBP1Q9UHY1 535 aa21.29■■□□□ 1
TNFAIP2-206ENST00000560428 PFASO15067 1338 aa21.29■■□□□ 1
TNFAIP2-206ENST00000560428 NMT2O60551 498 aa21.28■■□□□ 1
TNFAIP2-206ENST00000560428 PLA2G6O60733 806 aa21.28■■□□□ 1
TNFAIP2-206ENST00000560428 SLC1A4P43007 532 aa21.28■■□□□ 1
TNFAIP2-206ENST00000560428 ZNF792Q3KQV3 632 aa21.28■■□□□ 1
TNFAIP2-206ENST00000560428 FAM160B2Q86V87 743 aa21.28■■□□□ 1
TNFAIP2-206ENST00000560428 CHURC1Q8WUH1 139 aa21.28■■□□□ 1
TNFAIP2-206ENST00000560428 LAMA4Q16363 1823 aa21.27■■□□□ 1
TNFAIP2-206ENST00000560428 TMEM232C9JQI7 657 aa21.27■■□□□ 1
TNFAIP2-206ENST00000560428 SEPT4O43236 478 aa21.27■■□□□ 1
TNFAIP2-206ENST00000560428 PGK2P07205 417 aa21.27■■□□□ 1
TNFAIP2-206ENST00000560428 CHRDL2Q6WN34 429 aa21.27■■□□□ 1
TNFAIP2-206ENST00000560428 STAG1Q8WVM7 1258 aa21.27■■□□□ 1
TNFAIP2-206ENST00000560428 TOMM22Q9NS69 142 aa21.27■■□□□ 1
TNFAIP2-206ENST00000560428 TCP11L1Q9NUJ3 509 aa21.27■■□□□ 1
TNFAIP2-206ENST00000560428 FBXO40Q9UH90 709 aa21.27■■□□□ 1
TNFAIP2-206ENST00000560428 RIPK3Q9Y572 518 aa21.27■■□□□ 1
TNFAIP2-206ENST00000560428 MCCP23508 829 aa21.26■□□□□ 0.99
TNFAIP2-206ENST00000560428 NT5C2P49902 561 aa21.26■□□□□ 0.99
TNFAIP2-206ENST00000560428 AKNAD1Q5T1N1 836 aa21.26■□□□□ 0.99
TNFAIP2-206ENST00000560428 RCSD1Q6JBY9 416 aa21.26■□□□□ 0.99
TNFAIP2-206ENST00000560428 CWC27Q6UX04 472 aaKnown RBP21.26■□□□□ 0.99
TNFAIP2-206ENST00000560428 CPXCR1Q8N123 301 aa21.26■□□□□ 0.99
TNFAIP2-206ENST00000560428 CHST13Q8NET6 341 aa21.26■□□□□ 0.99
TNFAIP2-206ENST00000560428 TINF2Q9BSI4 451 aa21.26■□□□□ 0.99
TNFAIP2-206ENST00000560428 RNF41Q9H4P4 317 aaPredicted RBP21.26■□□□□ 0.99
TNFAIP2-206ENST00000560428 RAVER2Q9HCJ3 691 aaKnown RBP21.26■□□□□ 0.99
TNFAIP2-206ENST00000560428 DNM1LO00429 736 aa21.25■□□□□ 0.99
TNFAIP2-206ENST00000560428 RRP12Q5JTH9 1297 aaKnown RBP21.25■□□□□ 0.99
TNFAIP2-206ENST00000560428 MFSD6Q6ZSS7 791 aa21.25■□□□□ 0.99
TNFAIP2-206ENST00000560428 MSL3Q8N5Y2 521 aaKnown RBP21.25■□□□□ 0.99
TNFAIP2-206ENST00000560428 PRO3102Q9H379 93 aa21.25■□□□□ 0.99
TNFAIP2-206ENST00000560428 ISY1Q9ULR0 285 aaKnown RBP21.25■□□□□ 0.99
TNFAIP2-206ENST00000560428 DNAJC25-GNG10A0A024R161 153 aa21.24■□□□□ 0.99
TNFAIP2-206ENST00000560428 PDE4AP27815 886 aa21.24■□□□□ 0.99
TNFAIP2-206ENST00000560428 HAND2P61296 217 aa21.24■□□□□ 0.99
TNFAIP2-206ENST00000560428 IKQ13123 557 aaPredicted RBP21.24■□□□□ 0.99
TNFAIP2-206ENST00000560428 C7orf61Q8IZ16 206 aa21.24■□□□□ 0.99
TNFAIP2-206ENST00000560428 ARRDC4Q8NCT1 418 aa21.24■□□□□ 0.99
TNFAIP2-206ENST00000560428 DCAF4Q8WV16 495 aa21.24■□□□□ 0.99
TNFAIP2-206ENST00000560428 DDX11Q96FC9 970 aa21.24■□□□□ 0.99
TNFAIP2-206ENST00000560428 TOP1P11387 765 aaKnown RBP21.23■□□□□ 0.99
TNFAIP2-206ENST00000560428 PRAMEF19Q5SWL8 479 aa21.23■□□□□ 0.99
TNFAIP2-206ENST00000560428 KCTD1Q719H9 257 aa21.23■□□□□ 0.99
TNFAIP2-206ENST00000560428 ZNF467Q7Z7K2 595 aaPredicted RBP21.23■□□□□ 0.99
TNFAIP2-206ENST00000560428 TBC1D10CQ8IV04 446 aa21.23■□□□□ 0.99
TNFAIP2-206ENST00000560428 DSCC1Q9BVC3 393 aa21.23■□□□□ 0.99
TNFAIP2-206ENST00000560428 ZNF213O14771 459 aa21.22■□□□□ 0.99
TNFAIP2-206ENST00000560428 IRX6P78412 446 aaPredicted RBP21.22■□□□□ 0.99
TNFAIP2-206ENST00000560428 TKFCQ3LXA3 575 aa21.22■□□□□ 0.99
TNFAIP2-206ENST00000560428 TTC22Q5TAA0 569 aa21.22■□□□□ 0.99
TNFAIP2-206ENST00000560428 MAMDC4Q6UXC1 1216 aa21.22■□□□□ 0.99
TNFAIP2-206ENST00000560428 TTC14Q96N46 770 aa21.22■□□□□ 0.99
TNFAIP2-206ENST00000560428 TMEM47Q9BQJ4 181 aa21.22■□□□□ 0.99
TNFAIP2-206ENST00000560428 RBM27Q9P2N5 1060 aaKnown RBP21.22■□□□□ 0.99
TNFAIP2-206ENST00000560428 RANBP2P49792 3224 aaKnown RBP21.22■□□□□ 0.99
TNFAIP2-206ENST00000560428 ZNF536O15090 1300 aa21.22■□□□□ 0.99
TNFAIP2-206ENST00000560428 SYNGAP1Q96PV0 1343 aa21.22■□□□□ 0.99
TNFAIP2-206ENST00000560428 SLC4A3P48751 1232 aa21.21■□□□□ 0.99
TNFAIP2-206ENST00000560428 ANKRD35Q8N283 1001 aa21.21■□□□□ 0.99
TNFAIP2-206ENST00000560428 ESR2Q92731 530 aa21.21■□□□□ 0.99
TNFAIP2-206ENST00000560428 ACAD9Q9H845 621 aa21.21■□□□□ 0.99
TNFAIP2-206ENST00000560428 PRR12Q9ULL5 1215 aa21.21■□□□□ 0.99
TNFAIP2-206ENST00000560428 CNPY2Q9Y2B0 182 aa21.21■□□□□ 0.99
TNFAIP2-206ENST00000560428 A0A1W2PPC1 479 aa21.2■□□□□ 0.98
TNFAIP2-206ENST00000560428 GSPT1P15170 499 aaKnown RBP21.2■□□□□ 0.98
TNFAIP2-206ENST00000560428 FXR1P51114 621 aaKnown RBP eCLIP21.2■□□□□ 0.98
TNFAIP2-206ENST00000560428 LRRC26Q2I0M4 334 aa21.2■□□□□ 0.98
TNFAIP2-206ENST00000560428 CCDC96Q2M329 555 aa21.2■□□□□ 0.98
TNFAIP2-206ENST00000560428 BTNL9Q6UXG8 535 aa21.2■□□□□ 0.98
TNFAIP2-206ENST00000560428 SENP6Q9GZR1 1112 aaPredicted RBP21.2■□□□□ 0.98
TNFAIP2-206ENST00000560428 CTNNA3Q9UI47 895 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms