RNA–Protein interactions for RNA: ENST00000553942.5

MARK3-207, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best) BASIC

Gene MARK3, Length 2,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-207ENST00000553942 TYW1BQ6NUM6 668 aa10.56□□□□□ -0.72
MARK3-207ENST00000553942 CTCFLQ8NI51 663 aaPredicted RBP10.56□□□□□ -0.72
MARK3-207ENST00000553942 KANSL2Q9H9L4 492 aa10.56□□□□□ -0.72
MARK3-207ENST00000553942 TCP11L1Q9NUJ3 509 aa10.56□□□□□ -0.72
MARK3-207ENST00000553942 SPTLC3Q9NUV7 552 aa10.56□□□□□ -0.72
MARK3-207ENST00000553942 MYH4Q9Y623 1939 aa10.55□□□□□ -0.72
MARK3-207ENST00000553942 IQCA1LA6NCM1 817 aa10.55□□□□□ -0.72
MARK3-207ENST00000553942 KIF28PB7ZC32 967 aa10.55□□□□□ -0.72
MARK3-207ENST00000553942 USP17L10C9JJH3 530 aa10.55□□□□□ -0.72
MARK3-207ENST00000553942 STX6O43752 255 aa10.55□□□□□ -0.72
MARK3-207ENST00000553942 CEBPZQ03701 1054 aaKnown RBP10.55□□□□□ -0.72
MARK3-207ENST00000553942 IKQ13123 557 aaPredicted RBP10.55□□□□□ -0.72
MARK3-207ENST00000553942 SYCP1Q15431 976 aa10.55□□□□□ -0.72
MARK3-207ENST00000553942 PKN1Q16512 942 aa10.55□□□□□ -0.72
MARK3-207ENST00000553942 SLFN13Q68D06 897 aa10.55□□□□□ -0.72
MARK3-207ENST00000553942 TMTC3Q6ZXV5 915 aa10.55□□□□□ -0.72
MARK3-207ENST00000553942 INTS4Q96HW7 963 aaKnown RBP10.55□□□□□ -0.72
MARK3-207ENST00000553942 WNK4Q96J92 1243 aa10.55□□□□□ -0.72
MARK3-207ENST00000553942 PIGSQ96S52 555 aa10.55□□□□□ -0.72
MARK3-207ENST00000553942 ALG1Q9BT22 464 aa10.55□□□□□ -0.72
MARK3-207ENST00000553942 MTMR6Q9Y217 621 aa10.55□□□□□ -0.72
MARK3-207ENST00000553942 CNTNAP5Q8WYK1 1306 aa10.55□□□□□ -0.72
MARK3-207ENST00000553942 FAM205CA6NFA0 338 aa10.55□□□□□ -0.72
MARK3-207ENST00000553942 SLC1A4P43007 532 aa10.55□□□□□ -0.72
MARK3-207ENST00000553942 TMTC2Q8N394 836 aa10.55□□□□□ -0.72
MARK3-207ENST00000553942 RASGRP4Q8TDF6 673 aa10.55□□□□□ -0.72
MARK3-207ENST00000553942 OXER1Q8TDS5 423 aa10.55□□□□□ -0.72
MARK3-207ENST00000553942 COA7Q96BR5 231 aa10.55□□□□□ -0.72
MARK3-207ENST00000553942 OTUD5Q96G74 571 aa10.55□□□□□ -0.72
MARK3-207ENST00000553942 CCDC17Q96LX7 622 aa10.55□□□□□ -0.72
MARK3-207ENST00000553942 CALCOCO1Q9P1Z2 691 aa10.55□□□□□ -0.72
MARK3-207ENST00000553942 TFIP11Q9UBB9 837 aaKnown RBP10.55□□□□□ -0.72
MARK3-207ENST00000553942 DCAF8L1A6NGE4 600 aa10.54□□□□□ -0.72
MARK3-207ENST00000553942 TMEM232C9JQI7 657 aa10.54□□□□□ -0.72
MARK3-207ENST00000553942 PARP1P09874 1014 aaKnown RBP10.54□□□□□ -0.72
MARK3-207ENST00000553942 PTPRAP18433 802 aa10.54□□□□□ -0.72
MARK3-207ENST00000553942 HMGCS2P54868 508 aa10.54□□□□□ -0.72
MARK3-207ENST00000553942 MAP3K10Q02779 954 aa10.54□□□□□ -0.72
MARK3-207ENST00000553942 SSRP1Q08945 709 aaKnown RBP10.54□□□□□ -0.72
MARK3-207ENST00000553942 LRSAM1Q6UWE0 723 aa10.54□□□□□ -0.72
MARK3-207ENST00000553942 SMCHD1A6NHR9 2005 aa10.54□□□□□ -0.72
MARK3-207ENST00000553942 HTTP42858 3142 aa10.54□□□□□ -0.72
MARK3-207ENST00000553942 PALM3A6NDB9 673 aaPredicted RBP10.54□□□□□ -0.72
MARK3-207ENST00000553942 CTIFO43310 598 aaKnown RBP10.54□□□□□ -0.72
MARK3-207ENST00000553942 TBC1D12O60347 775 aa10.54□□□□□ -0.72
MARK3-207ENST00000553942 PPP1R11O60927 126 aaPredicted RBP10.54□□□□□ -0.72
MARK3-207ENST00000553942 SLFN14P0C7P3 912 aa10.54□□□□□ -0.72
MARK3-207ENST00000553942 NOVP48745 357 aa10.54□□□□□ -0.72
MARK3-207ENST00000553942 GRM1Q13255 1194 aa10.54□□□□□ -0.72
MARK3-207ENST00000553942 NR5A1Q13285 461 aa10.54□□□□□ -0.72
MARK3-207ENST00000553942 GRM4Q14833 912 aa10.54□□□□□ -0.72
MARK3-207ENST00000553942 EARS2Q5JPH6 523 aaKnown RBP10.54□□□□□ -0.72
MARK3-207ENST00000553942 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.54□□□□□ -0.72
MARK3-207ENST00000553942 ANKS1AQ92625 1134 aa10.54□□□□□ -0.72
MARK3-207ENST00000553942 SNCAIPQ9Y6H5 919 aa10.54□□□□□ -0.72
MARK3-207ENST00000553942 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.54□□□□□ -0.72
MARK3-207ENST00000553942 DNAH12Q6ZR08 3092 aa10.54□□□□□ -0.72
MARK3-207ENST00000553942 PLIN4Q96Q06 1357 aa10.53□□□□□ -0.72
MARK3-207ENST00000553942 H3BQV1 296 aa10.53□□□□□ -0.72
MARK3-207ENST00000553942 DDAH1O94760 285 aa10.53□□□□□ -0.72
MARK3-207ENST00000553942 FMNL1O95466 1100 aaPredicted RBP10.53□□□□□ -0.72
MARK3-207ENST00000553942 ASNSP08243 561 aa10.53□□□□□ -0.72
MARK3-207ENST00000553942 IFNAR1P17181 557 aa10.53□□□□□ -0.72
MARK3-207ENST00000553942 ATP2B1P20020 1258 aa10.53□□□□□ -0.72
MARK3-207ENST00000553942 IFFO2Q5TF58 517 aa10.53□□□□□ -0.72
MARK3-207ENST00000553942 CST9Q5W186 159 aa10.53□□□□□ -0.72
MARK3-207ENST00000553942 PNMA8AQ86V59 439 aaPredicted RBP10.53□□□□□ -0.72
MARK3-207ENST00000553942 ADGRF4Q8IZF3 695 aa10.53□□□□□ -0.72
MARK3-207ENST00000553942 KIFC2Q96AC6 838 aa10.53□□□□□ -0.72
MARK3-207ENST00000553942 PGBD1Q96JS3 809 aa10.53□□□□□ -0.72
MARK3-207ENST00000553942 UIMC1Q96RL1 719 aa10.53□□□□□ -0.72
MARK3-207ENST00000553942 SPDYE4A6NLX3 237 aa10.53□□□□□ -0.72
MARK3-207ENST00000553942 IRF6O14896 467 aa10.53□□□□□ -0.72
MARK3-207ENST00000553942 CTNND1O60716 968 aaKnown RBP10.53□□□□□ -0.72
MARK3-207ENST00000553942 CELF2O95319 508 aaKnown RBP10.53□□□□□ -0.72
MARK3-207ENST00000553942 BRD1O95696 1058 aa10.53□□□□□ -0.72
MARK3-207ENST00000553942 ZNF543Q08ER8 600 aa10.53□□□□□ -0.72
MARK3-207ENST00000553942 NOLC1Q14978 699 aaKnown RBP eCLIP10.53□□□□□ -0.72
MARK3-207ENST00000553942 USH1GQ495M9 461 aa10.53□□□□□ -0.72
MARK3-207ENST00000553942 KRT40Q6A162 431 aa10.53□□□□□ -0.72
MARK3-207ENST00000553942 CAVIN1Q6NZI2 390 aaKnown RBP10.53□□□□□ -0.72
MARK3-207ENST00000553942 HEATR3Q7Z4Q2 680 aa10.53□□□□□ -0.72
MARK3-207ENST00000553942 SCYL3Q8IZE3 742 aa10.53□□□□□ -0.72
MARK3-207ENST00000553942 C8orf76Q96K31 380 aa10.53□□□□□ -0.72
MARK3-207ENST00000553942 EFCC1Q9HA90 598 aa10.53□□□□□ -0.72
MARK3-207ENST00000553942 EMILIN3Q9NT22 766 aa10.53□□□□□ -0.72
MARK3-207ENST00000553942 NYAP2Q9P242 653 aa10.53□□□□□ -0.72
MARK3-207ENST00000553942 GREB1LQ9C091 1923 aaPredicted RBP10.52□□□□□ -0.72
MARK3-207ENST00000553942 BTBD18B2RXH4 712 aa10.52□□□□□ -0.73
MARK3-207ENST00000553942 WNT7AO00755 349 aa10.52□□□□□ -0.73
MARK3-207ENST00000553942 ZSCAN22P10073 491 aaPredicted RBP10.52□□□□□ -0.73
MARK3-207ENST00000553942 NUCB2P80303 420 aa10.52□□□□□ -0.73
MARK3-207ENST00000553942 DNM1Q05193 864 aaKnown RBP10.52□□□□□ -0.73
MARK3-207ENST00000553942 SUPT20HL1Q3ZLR7 823 aa10.52□□□□□ -0.73
MARK3-207ENST00000553942 CCDC174Q6PII3 467 aa10.52□□□□□ -0.73
MARK3-207ENST00000553942 JMJD4Q9H9V9 463 aa10.52□□□□□ -0.73
MARK3-207ENST00000553942 GPBP1L1Q9HC44 474 aaPredicted RBP10.52□□□□□ -0.73
MARK3-207ENST00000553942 PICK1Q9NRD5 415 aa10.52□□□□□ -0.73
MARK3-207ENST00000553942 LMBRD1Q9NUN5 540 aa10.52□□□□□ -0.73
MARK3-207ENST00000553942 GEMIN8Q9NWZ8 242 aaKnown RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms