RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-223ENST00000544268 KIAA0825Q8IV33 1275 aa17.04■□□□□ 0.32
CHFR-223ENST00000544268 KRI1Q8N9T8 703 aaKnown RBP17.04■□□□□ 0.32
CHFR-223ENST00000544268 PSMD1Q99460 953 aa17.04■□□□□ 0.32
CHFR-223ENST00000544268 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.04■□□□□ 0.32
CHFR-223ENST00000544268 ZNF277Q9NRM2 450 aaPredicted RBP17.04■□□□□ 0.32
CHFR-223ENST00000544268 ZNF646O15015 1829 aaPredicted RBP17.03■□□□□ 0.32
CHFR-223ENST00000544268 A0A087X0B3 334 aa17.03■□□□□ 0.32
CHFR-223ENST00000544268 ERICH2A1L162 156 aa17.03■□□□□ 0.32
CHFR-223ENST00000544268 MDM2Q00987 491 aaPredicted RBP17.03■□□□□ 0.32
CHFR-223ENST00000544268 FMR1Q06787 632 aaKnown RBP eCLIP17.03■□□□□ 0.32
CHFR-223ENST00000544268 OSBPL5Q9H0X9 879 aaPredicted RBP17.03■□□□□ 0.32
CHFR-223ENST00000544268 FLT1P17948 1338 aa17.03■□□□□ 0.32
CHFR-223ENST00000544268 STK36Q9NRP7 1315 aa17.02■□□□□ 0.32
CHFR-223ENST00000544268 CUTAO60888 179 aa17.02■□□□□ 0.32
CHFR-223ENST00000544268 PLCD1P51178 756 aa17.02■□□□□ 0.32
CHFR-223ENST00000544268 SART3Q15020 963 aaKnown RBP17.02■□□□□ 0.32
CHFR-223ENST00000544268 PKN1Q16512 942 aa17.02■□□□□ 0.32
CHFR-223ENST00000544268 ERCC6LQ2NKX8 1250 aa17.02■□□□□ 0.32
CHFR-223ENST00000544268 FAM47AQ5JRC9 791 aa17.02■□□□□ 0.32
CHFR-223ENST00000544268 TRIM22Q8IYM9 498 aa17.02■□□□□ 0.32
CHFR-223ENST00000544268 LRRN4CLQ8ND94 238 aa17.02■□□□□ 0.32
CHFR-223ENST00000544268 DYNLL2Q96FJ2 89 aa17.02■□□□□ 0.32
CHFR-223ENST00000544268 INTS13Q9NVM9 706 aa17.02■□□□□ 0.32
CHFR-223ENST00000544268 ORC4O43929 436 aa17.02■□□□□ 0.32
CHFR-223ENST00000544268 ZRANB2O95218 330 aaKnown RBP eCLIP17.02■□□□□ 0.32
CHFR-223ENST00000544268 SYT10Q6XYQ8 523 aa17.02■□□□□ 0.32
CHFR-223ENST00000544268 JMYQ8N9B5 988 aa17.02■□□□□ 0.32
CHFR-223ENST00000544268 MED15Q96RN5 788 aa17.02■□□□□ 0.32
CHFR-223ENST00000544268 CSRNP2Q9H175 543 aa17.02■□□□□ 0.32
CHFR-223ENST00000544268 V9GY48 417 aaPredicted RBP17.02■□□□□ 0.32
CHFR-223ENST00000544268 HHIPL2Q6UWX4 724 aa17.01■□□□□ 0.31
CHFR-223ENST00000544268 NEK11Q8NG66 645 aa17.01■□□□□ 0.31
CHFR-223ENST00000544268 TEKT1Q969V4 418 aa17.01■□□□□ 0.31
CHFR-223ENST00000544268 EPSTI1Q96J88 318 aa17.01■□□□□ 0.31
CHFR-223ENST00000544268 COL4A5P29400 1685 aa17.01■□□□□ 0.31
CHFR-223ENST00000544268 COBLO75128 1261 aa17.01■□□□□ 0.31
CHFR-223ENST00000544268 SERPINC1P01008 464 aa17.01■□□□□ 0.31
CHFR-223ENST00000544268 UBASH3AP57075 661 aa17.01■□□□□ 0.31
CHFR-223ENST00000544268 FKBP1AP62942 108 aaKnown RBP17.01■□□□□ 0.31
CHFR-223ENST00000544268 CFAP100Q494V2 611 aa17.01■□□□□ 0.31
CHFR-223ENST00000544268 MTA3Q9BTC8 594 aa17.01■□□□□ 0.31
CHFR-223ENST00000544268 MAN1B1Q9UKM7 699 aa17.01■□□□□ 0.31
CHFR-223ENST00000544268 PCDHAC2Q9Y5I4 1007 aa17.01■□□□□ 0.31
CHFR-223ENST00000544268 FAM237AA0A1B0GTK4 181 aa17■□□□□ 0.31
CHFR-223ENST00000544268 DEXIO95424 95 aa17■□□□□ 0.31
CHFR-223ENST00000544268 PTPREP23469 700 aa17■□□□□ 0.31
CHFR-223ENST00000544268 CRKP46108 304 aa17■□□□□ 0.31
CHFR-223ENST00000544268 MYL5Q02045 173 aa17■□□□□ 0.31
CHFR-223ENST00000544268 GPS2Q13227 327 aa17■□□□□ 0.31
CHFR-223ENST00000544268 SAFBQ15424 915 aaKnown RBP eCLIP17■□□□□ 0.31
CHFR-223ENST00000544268 DALRD3Q5D0E6 543 aaKnown RBP17■□□□□ 0.31
CHFR-223ENST00000544268 APOBEC3HQ6NTF7 200 aaKnown RBP17■□□□□ 0.31
CHFR-223ENST00000544268 AMOTL1Q8IY63 956 aa17■□□□□ 0.31
CHFR-223ENST00000544268 ZSCAN10Q96SZ4 725 aaPredicted RBP17■□□□□ 0.31
CHFR-223ENST00000544268 DDX60LQ5H9U9 1706 aaKnown RBP17■□□□□ 0.31
CHFR-223ENST00000544268 ROBO3Q96MS0 1386 aa17■□□□□ 0.31
CHFR-223ENST00000544268 ATP8B1O43520 1251 aa17■□□□□ 0.31
CHFR-223ENST00000544268 SFPQP23246 707 aaKnown RBP eCLIP17■□□□□ 0.31
CHFR-223ENST00000544268 PTGER2P43116 358 aa17■□□□□ 0.31
CHFR-223ENST00000544268 FUT2Q10981 343 aa17■□□□□ 0.31
CHFR-223ENST00000544268 LARGE2Q8N3Y3 721 aa17■□□□□ 0.31
CHFR-223ENST00000544268 STAMQ92783 540 aa17■□□□□ 0.31
CHFR-223ENST00000544268 PPP1R13BQ96KQ4 1090 aa17■□□□□ 0.31
CHFR-223ENST00000544268 USP40Q9NVE5 1235 aa17■□□□□ 0.31
CHFR-223ENST00000544268 ARGLU1Q9NWB6 273 aaPredicted RBP17■□□□□ 0.31
CHFR-223ENST00000544268 BRCA1P38398 1863 aaKnown RBP16.99■□□□□ 0.31
CHFR-223ENST00000544268 MYO1CO00159 1063 aa16.99■□□□□ 0.31
CHFR-223ENST00000544268 CASQ1P31415 396 aa16.99■□□□□ 0.31
CHFR-223ENST00000544268 PICALMQ13492 652 aa16.99■□□□□ 0.31
CHFR-223ENST00000544268 CDC42EP5Q6NZY7 148 aa16.99■□□□□ 0.31
CHFR-223ENST00000544268 SLC44A5Q8NCS7 719 aa16.99■□□□□ 0.31
CHFR-223ENST00000544268 DDX4Q9NQI0 724 aaKnown RBP16.99■□□□□ 0.31
CHFR-223ENST00000544268 FOCADQ5VW36 1801 aa16.99■□□□□ 0.31
CHFR-223ENST00000544268 MYH1P12882 1939 aa16.99■□□□□ 0.31
CHFR-223ENST00000544268 POSTNQ15063 836 aa16.99■□□□□ 0.31
CHFR-223ENST00000544268 SOGA3Q5TF21 947 aa16.99■□□□□ 0.31
CHFR-223ENST00000544268 TMCO3Q6UWJ1 677 aa16.99■□□□□ 0.31
CHFR-223ENST00000544268 IQCA1Q86XH1 822 aa16.99■□□□□ 0.31
CHFR-223ENST00000544268 UBXN6Q9BZV1 441 aa16.99■□□□□ 0.31
CHFR-223ENST00000544268 FOXP1Q9H334 677 aaPredicted RBP16.99■□□□□ 0.31
CHFR-223ENST00000544268 CWC15Q9P013 229 aaKnown RBP16.99■□□□□ 0.31
CHFR-223ENST00000544268 IKBKBO14920 756 aa16.98■□□□□ 0.31
CHFR-223ENST00000544268 FANCGO15287 622 aa16.98■□□□□ 0.31
CHFR-223ENST00000544268 AFMP43652 599 aa16.98■□□□□ 0.31
CHFR-223ENST00000544268 IFIT1BQ5T764 474 aaKnown RBP16.98■□□□□ 0.31
CHFR-223ENST00000544268 SMYD4Q8IYR2 804 aaPredicted RBP16.98■□□□□ 0.31
CHFR-223ENST00000544268 TMTC2Q8N394 836 aa16.98■□□□□ 0.31
CHFR-223ENST00000544268 ZDHHC15Q96MV8 337 aa16.98■□□□□ 0.31
CHFR-223ENST00000544268 NID2Q14112 1375 aa16.98■□□□□ 0.31
CHFR-223ENST00000544268 POLR3GO15318 223 aaPredicted RBP16.98■□□□□ 0.31
CHFR-223ENST00000544268 TUBB4AP04350 444 aa16.98■□□□□ 0.31
CHFR-223ENST00000544268 GSDMDP57764 484 aa16.98■□□□□ 0.31
CHFR-223ENST00000544268 ARHGAP29Q52LW3 1261 aa16.98■□□□□ 0.31
CHFR-223ENST00000544268 DHX58Q96C10 678 aa16.98■□□□□ 0.31
CHFR-223ENST00000544268 TSPY2A6NKD2 308 aa16.97■□□□□ 0.31
CHFR-223ENST00000544268 ACTN4O43707 911 aaKnown RBP16.97■□□□□ 0.31
CHFR-223ENST00000544268 RAD17O75943 681 aa16.97■□□□□ 0.31
CHFR-223ENST00000544268 TROAPQ12815 778 aa16.97■□□□□ 0.31
CHFR-223ENST00000544268 ZNF174Q15697 407 aa16.97■□□□□ 0.31
CHFR-223ENST00000544268 ZSCAN26Q16670 478 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms