RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 NAPGQ99747 312 aaPredicted RBP5.87□□□□□ -1.47
PROM1-220ENST00000540805 STK32BQ9NY57 414 aa5.87□□□□□ -1.47
PROM1-220ENST00000540805 MAGEC2Q9UBF1 373 aaPredicted RBP5.87□□□□□ -1.47
PROM1-220ENST00000540805 HPS5Q9UPZ3 1129 aa5.87□□□□□ -1.47
PROM1-220ENST00000540805 LTBP1Q14766 1721 aa5.87□□□□□ -1.47
PROM1-220ENST00000540805 RNF40O75150 1001 aa5.86□□□□□ -1.47
PROM1-220ENST00000540805 FMR1Q06787 632 aaKnown RBP eCLIP5.86□□□□□ -1.47
PROM1-220ENST00000540805 TADA2BQ86TJ2 420 aa5.86□□□□□ -1.47
PROM1-220ENST00000540805 FOXP4Q8IVH2 680 aaPredicted RBP5.86□□□□□ -1.47
PROM1-220ENST00000540805 WDR70Q9NW82 654 aa5.86□□□□□ -1.47
PROM1-220ENST00000540805 BIN2Q9UBW5 565 aaPredicted RBP5.86□□□□□ -1.47
PROM1-220ENST00000540805 TTF2Q9UNY4 1162 aaKnown RBP5.86□□□□□ -1.47
PROM1-220ENST00000540805 TIAM2Q8IVF5 1701 aa5.86□□□□□ -1.47
PROM1-220ENST00000540805 CHD4Q14839 1912 aa5.86□□□□□ -1.47
PROM1-220ENST00000540805 A0A087WUV0 522 aaPredicted RBP5.86□□□□□ -1.47
PROM1-220ENST00000540805 EIF4E1BA6NMX2 242 aaKnown RBP5.86□□□□□ -1.47
PROM1-220ENST00000540805 ERVV-1B6SEH8 477 aa5.86□□□□□ -1.47
PROM1-220ENST00000540805 M0R2C6 588 aa5.86□□□□□ -1.47
PROM1-220ENST00000540805 EYA2O00167 538 aa5.86□□□□□ -1.47
PROM1-220ENST00000540805 IRS4O14654 1257 aaPredicted RBP5.86□□□□□ -1.47
PROM1-220ENST00000540805 CDKL5O76039 1030 aa5.86□□□□□ -1.47
PROM1-220ENST00000540805 BMP6P22004 513 aa5.86□□□□□ -1.47
PROM1-220ENST00000540805 ADORA1P30542 326 aa5.86□□□□□ -1.47
PROM1-220ENST00000540805 IL6STP40189 918 aaPredicted RBP5.86□□□□□ -1.47
PROM1-220ENST00000540805 SP4Q02446 784 aa5.86□□□□□ -1.47
PROM1-220ENST00000540805 POSTNQ15063 836 aa5.86□□□□□ -1.47
PROM1-220ENST00000540805 KRT40Q6A162 431 aa5.86□□□□□ -1.47
PROM1-220ENST00000540805 SUGP1Q8IWZ8 645 aaKnown RBP5.86□□□□□ -1.47
PROM1-220ENST00000540805 ELOA2Q8IYF1 753 aaPredicted RBP5.86□□□□□ -1.47
PROM1-220ENST00000540805 IGSF22Q8N9C0 903 aa5.86□□□□□ -1.47
PROM1-220ENST00000540805 NCOA7Q8NI08 942 aa5.86□□□□□ -1.47
PROM1-220ENST00000540805 GREM2Q9H772 168 aa5.86□□□□□ -1.47
PROM1-220ENST00000540805 SLC12A7Q9Y666 1083 aa5.86□□□□□ -1.47
PROM1-220ENST00000540805 A0A1B0GTH6 734 aa5.86□□□□□ -1.47
PROM1-220ENST00000540805 LRRIQ3A6PVS8 624 aaPredicted RBP5.86□□□□□ -1.47
PROM1-220ENST00000540805 FOXN1O15353 648 aa5.86□□□□□ -1.47
PROM1-220ENST00000540805 ZMYND10O75800 440 aa5.86□□□□□ -1.47
PROM1-220ENST00000540805 FGFR2P21802 821 aa5.86□□□□□ -1.47
PROM1-220ENST00000540805 HMGB2P26583 209 aaKnown RBP5.86□□□□□ -1.47
PROM1-220ENST00000540805 SSR1P43307 286 aaKnown RBP5.86□□□□□ -1.47
PROM1-220ENST00000540805 CCT5P48643 541 aa5.86□□□□□ -1.47
PROM1-220ENST00000540805 NR1I3Q14994 352 aa5.86□□□□□ -1.47
PROM1-220ENST00000540805 SLC9C2Q5TAH2 1124 aa5.86□□□□□ -1.47
PROM1-220ENST00000540805 RASGRP2Q7LDG7 609 aa5.86□□□□□ -1.47
PROM1-220ENST00000540805 MB21D2Q8IYB1 491 aaPredicted RBP5.86□□□□□ -1.47
PROM1-220ENST00000540805 CCDC148Q8NFR7 591 aa5.86□□□□□ -1.47
PROM1-220ENST00000540805 FAXDC2Q96IV6 333 aa5.86□□□□□ -1.47
PROM1-220ENST00000540805 VIPAS39Q9H9C1 493 aa5.86□□□□□ -1.47
PROM1-220ENST00000540805 SAMSN1Q9NSI8 373 aaKnown RBP5.86□□□□□ -1.47
PROM1-220ENST00000540805 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.86□□□□□ -1.47
PROM1-220ENST00000540805 BCS1LQ9Y276 419 aa5.86□□□□□ -1.47
PROM1-220ENST00000540805 COL1A1P02452 1464 aaPredicted RBP5.85□□□□□ -1.47
PROM1-220ENST00000540805 HLA-DOAP06340 250 aa5.85□□□□□ -1.47
PROM1-220ENST00000540805 MCM3P25205 808 aa5.85□□□□□ -1.47
PROM1-220ENST00000540805 CA8P35219 290 aa5.85□□□□□ -1.47
PROM1-220ENST00000540805 NLRP5P59047 1200 aa5.85□□□□□ -1.47
PROM1-220ENST00000540805 RBL2Q08999 1139 aa5.85□□□□□ -1.47
PROM1-220ENST00000540805 ZNF827Q17R98 1081 aa5.85□□□□□ -1.47
PROM1-220ENST00000540805 SPTY2D1Q68D10 685 aaPredicted RBP5.85□□□□□ -1.47
PROM1-220ENST00000540805 TRIML1Q8N9V2 468 aa5.85□□□□□ -1.47
PROM1-220ENST00000540805 LINC00116Q8NCU8 138 aa5.85□□□□□ -1.47
PROM1-220ENST00000540805 CPLX3Q8WVH0 158 aa5.85□□□□□ -1.47
PROM1-220ENST00000540805 THOC1Q96FV9 657 aaKnown RBP5.85□□□□□ -1.47
PROM1-220ENST00000540805 AIFM3Q96NN9 605 aa5.85□□□□□ -1.47
PROM1-220ENST00000540805 MAP3K14Q99558 947 aa5.85□□□□□ -1.47
PROM1-220ENST00000540805 ZMYM6O95789 1325 aa5.85□□□□□ -1.47
PROM1-220ENST00000540805 ZNF646O15015 1829 aaPredicted RBP5.85□□□□□ -1.47
PROM1-220ENST00000540805 MFAP3LO75121 409 aa5.85□□□□□ -1.47
PROM1-220ENST00000540805 ABL1P00519 1130 aa5.85□□□□□ -1.47
PROM1-220ENST00000540805 CRKLP46109 303 aaKnown RBP5.85□□□□□ -1.47
PROM1-220ENST00000540805 METAP2P50579 478 aaKnown RBP eCLIP5.85□□□□□ -1.47
PROM1-220ENST00000540805 PLCD1P51178 756 aa5.85□□□□□ -1.47
PROM1-220ENST00000540805 CCNHP51946 323 aaPredicted RBP5.85□□□□□ -1.47
PROM1-220ENST00000540805 MAP2K1Q02750 393 aaPredicted RBP5.85□□□□□ -1.47
PROM1-220ENST00000540805 VPS72Q15906 364 aa5.85□□□□□ -1.47
PROM1-220ENST00000540805 FILIP1LQ4L180 1135 aa5.85□□□□□ -1.47
PROM1-220ENST00000540805 WDR93Q6P2C0 686 aa5.85□□□□□ -1.47
PROM1-220ENST00000540805 CNGA4Q8IV77 575 aa5.85□□□□□ -1.47
PROM1-220ENST00000540805 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.85□□□□□ -1.47
PROM1-220ENST00000540805 MYO1AQ9UBC5 1043 aa5.85□□□□□ -1.47
PROM1-220ENST00000540805 CCDC194A0A1B0GVG4 234 aa5.85□□□□□ -1.47
PROM1-220ENST00000540805 TEX33O43247 280 aa5.85□□□□□ -1.47
PROM1-220ENST00000540805 NTSR2O95665 410 aa5.85□□□□□ -1.47
PROM1-220ENST00000540805 AARSP49588 968 aaKnown RBP eCLIP5.85□□□□□ -1.47
PROM1-220ENST00000540805 ANTXR2P58335 489 aa5.85□□□□□ -1.47
PROM1-220ENST00000540805 MRPS25P82663 173 aaKnown RBP5.85□□□□□ -1.47
PROM1-220ENST00000540805 MDM2Q00987 491 aaPredicted RBP5.85□□□□□ -1.47
PROM1-220ENST00000540805 MORC3Q14149 939 aa5.85□□□□□ -1.47
PROM1-220ENST00000540805 ZYXQ15942 572 aaKnown RBP5.85□□□□□ -1.47
PROM1-220ENST00000540805 TMEM67Q5HYA8 995 aa5.85□□□□□ -1.47
PROM1-220ENST00000540805 SUSD4Q5VX71 490 aa5.85□□□□□ -1.47
PROM1-220ENST00000540805 CCDC70Q6NSX1 233 aa5.85□□□□□ -1.47
PROM1-220ENST00000540805 C3orf67Q6ZVT6 689 aa5.85□□□□□ -1.47
PROM1-220ENST00000540805 GSPT2Q8IYD1 628 aaKnown RBP5.85□□□□□ -1.47
PROM1-220ENST00000540805 CNBD1Q8NA66 436 aa5.85□□□□□ -1.47
PROM1-220ENST00000540805 ACRBPQ8NEB7 543 aa5.85□□□□□ -1.47
PROM1-220ENST00000540805 CCDC51Q96ER9 411 aa5.85□□□□□ -1.47
PROM1-220ENST00000540805 CDCA7Q9BWT1 371 aaPredicted RBP5.85□□□□□ -1.47
PROM1-220ENST00000540805 NBPF3Q9H094 633 aa5.85□□□□□ -1.47
PROM1-220ENST00000540805 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms