RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 SOX10P56693 466 aa22.71■■□□□ 1.23
DDX55-207ENST00000540763 RASGRP2Q7LDG7 609 aa22.71■■□□□ 1.23
DDX55-207ENST00000540763 CATIPQ7Z7H3 387 aa22.71■■□□□ 1.23
DDX55-207ENST00000540763 REPS2Q8NFH8 660 aa22.71■■□□□ 1.23
DDX55-207ENST00000540763 BTBD7Q9P203 1132 aa22.71■■□□□ 1.23
DDX55-207ENST00000540763 ISY1Q9ULR0 285 aaKnown RBP22.71■■□□□ 1.23
DDX55-207ENST00000540763 MTMR7Q9Y216 660 aa22.71■■□□□ 1.23
DDX55-207ENST00000540763 PARP1P09874 1014 aaKnown RBP22.7■■□□□ 1.22
DDX55-207ENST00000540763 CASTP20810 708 aaKnown RBP22.7■■□□□ 1.22
DDX55-207ENST00000540763 OAZ1P54368 228 aa22.7■■□□□ 1.22
DDX55-207ENST00000540763 FCGRTP55899 365 aa22.7■■□□□ 1.22
DDX55-207ENST00000540763 TROAPQ12815 778 aa22.7■■□□□ 1.22
DDX55-207ENST00000540763 IKQ13123 557 aaPredicted RBP22.7■■□□□ 1.22
DDX55-207ENST00000540763 SHCBP1Q8NEM2 672 aa22.7■■□□□ 1.22
DDX55-207ENST00000540763 KIFC2Q96AC6 838 aa22.7■■□□□ 1.22
DDX55-207ENST00000540763 SLC38A10Q9HBR0 1119 aa22.7■■□□□ 1.22
DDX55-207ENST00000540763 SENP2Q9HC62 589 aa22.7■■□□□ 1.22
DDX55-207ENST00000540763 ZSWIM6Q9HCJ5 1215 aa22.7■■□□□ 1.22
DDX55-207ENST00000540763 FRMPD2Q68DX3 1309 aaPredicted RBP22.69■■□□□ 1.22
DDX55-207ENST00000540763 CCDC69A6NI79 296 aa22.69■■□□□ 1.22
DDX55-207ENST00000540763 CALM1P0DP23 149 aa22.69■■□□□ 1.22
DDX55-207ENST00000540763 CALM2P0DP24 149 aa22.69■■□□□ 1.22
DDX55-207ENST00000540763 CALM3P0DP25 149 aa22.69■■□□□ 1.22
DDX55-207ENST00000540763 MAPK4P31152 587 aa22.69■■□□□ 1.22
DDX55-207ENST00000540763 COPB2P35606 906 aa22.69■■□□□ 1.22
DDX55-207ENST00000540763 PRMT2P55345 433 aa22.69■■□□□ 1.22
DDX55-207ENST00000540763 GRM4Q14833 912 aa22.69■■□□□ 1.22
DDX55-207ENST00000540763 PKN2Q16513 984 aaKnown RBP22.69■■□□□ 1.22
DDX55-207ENST00000540763 RUFY3Q7L099 469 aa22.69■■□□□ 1.22
DDX55-207ENST00000540763 ZNF654Q8IZM8 581 aa22.69■■□□□ 1.22
DDX55-207ENST00000540763 AGXT2Q9BYV1 514 aa22.69■■□□□ 1.22
DDX55-207ENST00000540763 SPATC1LQ9H0A9 340 aa22.69■■□□□ 1.22
DDX55-207ENST00000540763 ZNF214Q9UL59 606 aaPredicted RBP22.69■■□□□ 1.22
DDX55-207ENST00000540763 ZBED4O75132 1171 aa22.68■■□□□ 1.22
DDX55-207ENST00000540763 PSMC4P43686 418 aa22.68■■□□□ 1.22
DDX55-207ENST00000540763 RCAN1P53805 252 aa22.68■■□□□ 1.22
DDX55-207ENST00000540763 TMEM132BQ14DG7 1078 aa22.68■■□□□ 1.22
DDX55-207ENST00000540763 Q3C1V9 767 aa22.68■■□□□ 1.22
DDX55-207ENST00000540763 SYDE2Q5VT97 1194 aa22.68■■□□□ 1.22
DDX55-207ENST00000540763 NFXL1Q6ZNB6 911 aa22.68■■□□□ 1.22
DDX55-207ENST00000540763 LRRC2Q9BYS8 371 aa22.68■■□□□ 1.22
DDX55-207ENST00000540763 EFCC1Q9HA90 598 aa22.68■■□□□ 1.22
DDX55-207ENST00000540763 PRR12Q9ULL5 1215 aa22.68■■□□□ 1.22
DDX55-207ENST00000540763 CYP46A1Q9Y6A2 500 aa22.68■■□□□ 1.22
DDX55-207ENST00000540763 PALM3A6NDB9 673 aaPredicted RBP22.67■■□□□ 1.22
DDX55-207ENST00000540763 SLC25A27O95847 323 aa22.67■■□□□ 1.22
DDX55-207ENST00000540763 HOXD10P28358 340 aa22.67■■□□□ 1.22
DDX55-207ENST00000540763 CTGFP29279 349 aa22.67■■□□□ 1.22
DDX55-207ENST00000540763 TTBK2Q6IQ55 1244 aa22.67■■□□□ 1.22
DDX55-207ENST00000540763 SAMD1Q6SPF0 538 aaPredicted RBP22.67■■□□□ 1.22
DDX55-207ENST00000540763 OTOP1Q7RTM1 612 aa22.67■■□□□ 1.22
DDX55-207ENST00000540763 RIOX2Q8IUF8 465 aa22.67■■□□□ 1.22
DDX55-207ENST00000540763 TRIM47Q96LD4 638 aa22.67■■□□□ 1.22
DDX55-207ENST00000540763 TEX13BQ9BXU2 312 aa22.67■■□□□ 1.22
DDX55-207ENST00000540763 ARHGAP39Q9C0H5 1083 aa22.67■■□□□ 1.22
DDX55-207ENST00000540763 GPCPD1Q9NPB8 672 aa22.67■■□□□ 1.22
DDX55-207ENST00000540763 GPHNQ9NQX3 736 aaPredicted RBP22.67■■□□□ 1.22
DDX55-207ENST00000540763 PNMA2Q9UL42 364 aa22.67■■□□□ 1.22
DDX55-207ENST00000540763 CTDP1Q9Y5B0 961 aaPredicted RBP22.67■■□□□ 1.22
DDX55-207ENST00000540763 FMNL1O95466 1100 aaPredicted RBP22.66■■□□□ 1.22
DDX55-207ENST00000540763 KIF5BP33176 963 aa22.66■■□□□ 1.22
DDX55-207ENST00000540763 CAP1Q01518 475 aa22.66■■□□□ 1.22
DDX55-207ENST00000540763 TCEANC2Q96MN5 208 aa22.66■■□□□ 1.22
DDX55-207ENST00000540763 MOV10L1Q9BXT6 1211 aaKnown RBP22.66■■□□□ 1.22
DDX55-207ENST00000540763 RANBP17Q9H2T7 1088 aaKnown RBP22.66■■□□□ 1.22
DDX55-207ENST00000540763 UPF2Q9HAU5 1272 aaKnown RBP22.66■■□□□ 1.22
DDX55-207ENST00000540763 MAD2L2Q9UI95 211 aa22.66■■□□□ 1.22
DDX55-207ENST00000540763 HPS5Q9UPZ3 1129 aa22.66■■□□□ 1.22
DDX55-207ENST00000540763 SLC12A7Q9Y666 1083 aa22.66■■□□□ 1.22
DDX55-207ENST00000540763 ZNFX1Q9P2E3 1918 aaKnown RBP22.66■■□□□ 1.22
DDX55-207ENST00000540763 TNPO2O14787 897 aaKnown RBP22.65■■□□□ 1.22
DDX55-207ENST00000540763 STAT3P40763 770 aa22.65■■□□□ 1.22
DDX55-207ENST00000540763 APOA5Q6Q788 366 aa22.65■■□□□ 1.22
DDX55-207ENST00000540763 SYNE3Q6ZMZ3 975 aa22.65■■□□□ 1.22
DDX55-207ENST00000540763 CCAR1Q8IX12 1150 aaKnown RBP22.65■■□□□ 1.22
DDX55-207ENST00000540763 CTCFLQ8NI51 663 aaPredicted RBP22.65■■□□□ 1.22
DDX55-207ENST00000540763 COA7Q96BR5 231 aa22.65■■□□□ 1.22
DDX55-207ENST00000540763 PORCNQ9H237 461 aa22.65■■□□□ 1.22
DDX55-207ENST00000540763 MROH8Q9H579 483 aa22.65■■□□□ 1.22
DDX55-207ENST00000540763 TRIM17Q9Y577 477 aa22.65■■□□□ 1.22
DDX55-207ENST00000540763 RBBP6Q7Z6E9 1792 aaKnown RBP22.65■■□□□ 1.22
DDX55-207ENST00000540763 TNRC18O15417 2968 aaPredicted RBP22.65■■□□□ 1.22
DDX55-207ENST00000540763 KLRF2D3W0D1 207 aa22.64■■□□□ 1.21
DDX55-207ENST00000540763 PEX10O60683 326 aa22.64■■□□□ 1.21
DDX55-207ENST00000540763 GOLGA8HP0CJ92 632 aa22.64■■□□□ 1.21
DDX55-207ENST00000540763 CPA1P15085 419 aa22.64■■□□□ 1.21
DDX55-207ENST00000540763 SLC16A2P36021 539 aa22.64■■□□□ 1.21
DDX55-207ENST00000540763 RBM25P49756 843 aaKnown RBP22.64■■□□□ 1.21
DDX55-207ENST00000540763 FGD1P98174 961 aa22.64■■□□□ 1.21
DDX55-207ENST00000540763 PLS1Q14651 629 aa22.64■■□□□ 1.21
DDX55-207ENST00000540763 Q6ZUG5 572 aa22.64■■□□□ 1.21
DDX55-207ENST00000540763 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.64■■□□□ 1.21
DDX55-207ENST00000540763 SOCS4Q8WXH5 440 aa22.64■■□□□ 1.21
DDX55-207ENST00000540763 CHMP4CQ96CF2 233 aa22.64■■□□□ 1.21
DDX55-207ENST00000540763 SRRDQ9UH36 339 aa22.64■■□□□ 1.21
DDX55-207ENST00000540763 NID2Q14112 1375 aa22.63■■□□□ 1.21
DDX55-207ENST00000540763 SMARCA1P28370 1054 aa22.63■■□□□ 1.21
DDX55-207ENST00000540763 GNAQP50148 359 aa22.63■■□□□ 1.21
DDX55-207ENST00000540763 SNRNP48Q6IEG0 339 aaKnown RBP22.63■■□□□ 1.21
DDX55-207ENST00000540763 GPR142Q7Z601 462 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms