RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 PURBQ96QR8 312 aaKnown RBP19.73■□□□□ 0.75
RAB40C-205ENST00000539661 ZKSCAN3Q9BRR0 538 aa19.73■□□□□ 0.75
RAB40C-205ENST00000539661 FAM169AQ9Y6X4 670 aa19.73■□□□□ 0.75
RAB40C-205ENST00000539661 PNPLA7Q6ZV29 1317 aa19.73■□□□□ 0.75
RAB40C-205ENST00000539661 ATXN2Q99700 1313 aaKnown RBP19.73■□□□□ 0.75
RAB40C-205ENST00000539661 ARAP2Q8WZ64 1704 aa19.73■□□□□ 0.75
RAB40C-205ENST00000539661 PHKA1P46020 1223 aa19.72■□□□□ 0.75
RAB40C-205ENST00000539661 PKN1Q16512 942 aa19.72■□□□□ 0.75
RAB40C-205ENST00000539661 EARS2Q5JPH6 523 aaKnown RBP19.72■□□□□ 0.75
RAB40C-205ENST00000539661 ZNF507Q8TCN5 953 aa19.72■□□□□ 0.75
RAB40C-205ENST00000539661 CAPZA3Q96KX2 299 aa19.72■□□□□ 0.75
RAB40C-205ENST00000539661 VPS54Q9P1Q0 977 aa19.72■□□□□ 0.75
RAB40C-205ENST00000539661 MYH2Q9UKX2 1941 aa19.72■□□□□ 0.75
RAB40C-205ENST00000539661 PDS5AQ29RF7 1337 aaKnown RBP19.72■□□□□ 0.75
RAB40C-205ENST00000539661 COL22A1Q8NFW1 1626 aaPredicted RBP19.72■□□□□ 0.75
RAB40C-205ENST00000539661 EIF3HO15372 352 aaKnown RBP eCLIP19.72■□□□□ 0.75
RAB40C-205ENST00000539661 OPA1O60313 960 aa19.72■□□□□ 0.75
RAB40C-205ENST00000539661 USP8P40818 1118 aa19.72■□□□□ 0.75
RAB40C-205ENST00000539661 CCT5P48643 541 aa19.72■□□□□ 0.75
RAB40C-205ENST00000539661 SEMA3FQ13275 785 aa19.72■□□□□ 0.75
RAB40C-205ENST00000539661 SH3GL2Q99962 352 aa19.72■□□□□ 0.75
RAB40C-205ENST00000539661 UBAC1Q9BSL1 405 aa19.72■□□□□ 0.75
RAB40C-205ENST00000539661 NUP58Q9BVL2 599 aa19.72■□□□□ 0.75
RAB40C-205ENST00000539661 BLZF1Q9H2G9 400 aa19.72■□□□□ 0.75
RAB40C-205ENST00000539661 TOMM22Q9NS69 142 aa19.72■□□□□ 0.75
RAB40C-205ENST00000539661 IPO7O95373 1038 aaKnown RBP19.72■□□□□ 0.75
RAB40C-205ENST00000539661 RPN1P04843 607 aaKnown RBP19.72■□□□□ 0.75
RAB40C-205ENST00000539661 MYBL2P10244 700 aa19.72■□□□□ 0.75
RAB40C-205ENST00000539661 EPB41P11171 864 aaKnown RBP19.72■□□□□ 0.75
RAB40C-205ENST00000539661 TDO2P48775 406 aa19.72■□□□□ 0.75
RAB40C-205ENST00000539661 RETREG2Q8NC44 543 aa19.72■□□□□ 0.75
RAB40C-205ENST00000539661 TNFRSF25Q93038 417 aa19.72■□□□□ 0.75
RAB40C-205ENST00000539661 THAP9Q9H5L6 903 aa19.72■□□□□ 0.75
RAB40C-205ENST00000539661 ARMT1Q9H993 441 aa19.72■□□□□ 0.75
RAB40C-205ENST00000539661 GNL3LQ9NVN8 582 aaKnown RBP19.72■□□□□ 0.75
RAB40C-205ENST00000539661 BCORQ6W2J9 1755 aa19.71■□□□□ 0.75
RAB40C-205ENST00000539661 CCDC91Q7Z6B0 441 aa19.71■□□□□ 0.75
RAB40C-205ENST00000539661 IRF2BP1Q8IU81 584 aa19.71■□□□□ 0.75
RAB40C-205ENST00000539661 MAGEB6Q8N7X4 407 aa19.71■□□□□ 0.75
RAB40C-205ENST00000539661 TSGA10Q9BZW7 698 aa19.71■□□□□ 0.75
RAB40C-205ENST00000539661 ZNHIT6Q9NWK9 470 aaKnown RBP19.71■□□□□ 0.75
RAB40C-205ENST00000539661 TNS2Q63HR2 1409 aa19.71■□□□□ 0.75
RAB40C-205ENST00000539661 COBLO75128 1261 aa19.71■□□□□ 0.75
RAB40C-205ENST00000539661 TRAPPC10P48553 1259 aa19.71■□□□□ 0.75
RAB40C-205ENST00000539661 DNM2P50570 870 aa19.71■□□□□ 0.75
RAB40C-205ENST00000539661 PTGDRQ13258 359 aa19.71■□□□□ 0.75
RAB40C-205ENST00000539661 ZNF174Q15697 407 aa19.71■□□□□ 0.75
RAB40C-205ENST00000539661 STAMQ92783 540 aa19.71■□□□□ 0.75
RAB40C-205ENST00000539661 XIRP1Q702N8 1843 aaKnown RBP19.71■□□□□ 0.75
RAB40C-205ENST00000539661 SEC23AQ15436 765 aa19.7■□□□□ 0.74
RAB40C-205ENST00000539661 KIF6Q6ZMV9 814 aa19.7■□□□□ 0.74
RAB40C-205ENST00000539661 SPATA5Q8NB90 893 aa19.7■□□□□ 0.74
RAB40C-205ENST00000539661 LPIN2Q92539 896 aa19.7■□□□□ 0.74
RAB40C-205ENST00000539661 MTRQ99707 1265 aa19.7■□□□□ 0.74
RAB40C-205ENST00000539661 RBM28Q9NW13 759 aaKnown RBP19.7■□□□□ 0.74
RAB40C-205ENST00000539661 PCDH11XQ9BZA7 1347 aa19.7■□□□□ 0.74
RAB40C-205ENST00000539661 PCDH11YQ9BZA8 1340 aa19.7■□□□□ 0.74
RAB40C-205ENST00000539661 PRLRP16471 622 aa19.7■□□□□ 0.74
RAB40C-205ENST00000539661 PRCPP42785 496 aa19.7■□□□□ 0.74
RAB40C-205ENST00000539661 SKOR1P84550 965 aa19.7■□□□□ 0.74
RAB40C-205ENST00000539661 FUT2Q10981 343 aa19.7■□□□□ 0.74
RAB40C-205ENST00000539661 ADSSL1Q8N142 457 aa19.7■□□□□ 0.74
RAB40C-205ENST00000539661 BCAS4Q8TDM0 211 aa19.7■□□□□ 0.74
RAB40C-205ENST00000539661 NOC3LQ8WTT2 800 aaKnown RBP19.7■□□□□ 0.74
RAB40C-205ENST00000539661 GREM2Q9H772 168 aa19.7■□□□□ 0.74
RAB40C-205ENST00000539661 GRIN2DO15399 1336 aa19.7■□□□□ 0.74
RAB40C-205ENST00000539661 SOS2Q07890 1332 aaPredicted RBP19.69■□□□□ 0.74
RAB40C-205ENST00000539661 PDE2AO00408 941 aaPredicted RBP19.69■□□□□ 0.74
RAB40C-205ENST00000539661 ZMYND10O75800 440 aa19.69■□□□□ 0.74
RAB40C-205ENST00000539661 IDEP14735 1019 aa19.69■□□□□ 0.74
RAB40C-205ENST00000539661 CDK17Q00537 523 aa19.69■□□□□ 0.74
RAB40C-205ENST00000539661 PUM3Q15397 648 aaKnown RBP19.69■□□□□ 0.74
RAB40C-205ENST00000539661 ALS2CLQ60I27 953 aa19.69■□□□□ 0.74
RAB40C-205ENST00000539661 SPATS2Q86XZ4 545 aaKnown RBP19.69■□□□□ 0.74
RAB40C-205ENST00000539661 MYH3P11055 1940 aa19.69■□□□□ 0.74
RAB40C-205ENST00000539661 CTSWP56202 376 aa19.69■□□□□ 0.74
RAB40C-205ENST00000539661 GDAP1L1Q96MZ0 367 aa19.69■□□□□ 0.74
RAB40C-205ENST00000539661 SLC4A4Q9Y6R1 1079 aa19.69■□□□□ 0.74
RAB40C-205ENST00000539661 WNT7AO00755 349 aa19.68■□□□□ 0.74
RAB40C-205ENST00000539661 SRGNP10124 158 aa19.68■□□□□ 0.74
RAB40C-205ENST00000539661 GSPT2Q8IYD1 628 aaKnown RBP19.68■□□□□ 0.74
RAB40C-205ENST00000539661 TTYH3Q9C0H2 523 aa19.68■□□□□ 0.74
RAB40C-205ENST00000539661 FGFR2P21802 821 aa19.68■□□□□ 0.74
RAB40C-205ENST00000539661 LIG3P49916 1009 aa19.68■□□□□ 0.74
RAB40C-205ENST00000539661 GNGT1P63211 74 aa19.68■□□□□ 0.74
RAB40C-205ENST00000539661 EMBQ6PCB8 327 aa19.68■□□□□ 0.74
RAB40C-205ENST00000539661 B4GALNT4Q76KP1 1039 aa19.68■□□□□ 0.74
RAB40C-205ENST00000539661 ESR2Q92731 530 aa19.68■□□□□ 0.74
RAB40C-205ENST00000539661 JADE2Q9NQC1 790 aa19.68■□□□□ 0.74
RAB40C-205ENST00000539661 MAGEC2Q9UBF1 373 aaPredicted RBP19.68■□□□□ 0.74
RAB40C-205ENST00000539661 SNX12Q9UMY4 172 aa19.68■□□□□ 0.74
RAB40C-205ENST00000539661 TNKSO95271 1327 aa19.67■□□□□ 0.74
RAB40C-205ENST00000539661 INPP5BP32019 993 aa19.67■□□□□ 0.74
RAB40C-205ENST00000539661 EPHB4P54760 987 aa19.67■□□□□ 0.74
RAB40C-205ENST00000539661 ZBED6P86452 979 aa19.67■□□□□ 0.74
RAB40C-205ENST00000539661 KIF5AQ12840 1032 aa19.67■□□□□ 0.74
RAB40C-205ENST00000539661 KCNB1Q14721 858 aa19.67■□□□□ 0.74
RAB40C-205ENST00000539661 ARL6IP4Q66PJ3 421 aaKnown RBP19.67■□□□□ 0.74
RAB40C-205ENST00000539661 SND1Q7KZF4 910 aaKnown RBP eCLIP19.67■□□□□ 0.74
RAB40C-205ENST00000539661 TRIM58Q8NG06 486 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms