RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 SRRTQ9BXP5 876 aaKnown RBP14.2□□□□□ -0.14
SFSWAP-208ENST00000539506 VPS16Q9H269 839 aa14.2□□□□□ -0.14
SFSWAP-208ENST00000539506 MKRN1Q9UHC7 482 aaKnown RBP14.2□□□□□ -0.14
SFSWAP-208ENST00000539506 NARFQ9UHQ1 456 aa14.2□□□□□ -0.14
SFSWAP-208ENST00000539506 FAM205AQ6ZU69 1335 aa14.2□□□□□ -0.14
SFSWAP-208ENST00000539506 CNTNAP4Q9C0A0 1308 aa14.2□□□□□ -0.14
SFSWAP-208ENST00000539506 KIAA1551Q9HCM1 1747 aa14.19□□□□□ -0.14
SFSWAP-208ENST00000539506 SEMA3EO15041 775 aa14.19□□□□□ -0.14
SFSWAP-208ENST00000539506 CALM1P0DP23 149 aa14.19□□□□□ -0.14
SFSWAP-208ENST00000539506 CALM2P0DP24 149 aa14.19□□□□□ -0.14
SFSWAP-208ENST00000539506 CALM3P0DP25 149 aa14.19□□□□□ -0.14
SFSWAP-208ENST00000539506 ERCC5P28715 1186 aaPredicted RBP14.19□□□□□ -0.14
SFSWAP-208ENST00000539506 TYW1BQ6NUM6 668 aa14.19□□□□□ -0.14
SFSWAP-208ENST00000539506 PPFIBP1Q86W92 1011 aa14.19□□□□□ -0.14
SFSWAP-208ENST00000539506 GSPT2Q8IYD1 628 aaKnown RBP14.19□□□□□ -0.14
SFSWAP-208ENST00000539506 NOA1Q8NC60 698 aaKnown RBP14.19□□□□□ -0.14
SFSWAP-208ENST00000539506 NLRP3Q96P20 1036 aa14.19□□□□□ -0.14
SFSWAP-208ENST00000539506 HDAC6Q9UBN7 1215 aa14.19□□□□□ -0.14
SFSWAP-208ENST00000539506 SRGAP2O75044 1071 aa14.19□□□□□ -0.14
SFSWAP-208ENST00000539506 PCP11498 1178 aaKnown RBP14.19□□□□□ -0.14
SFSWAP-208ENST00000539506 SCG2P13521 617 aa14.19□□□□□ -0.14
SFSWAP-208ENST00000539506 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.19□□□□□ -0.14
SFSWAP-208ENST00000539506 CAPZA3Q96KX2 299 aa14.19□□□□□ -0.14
SFSWAP-208ENST00000539506 SETDB2Q96T68 719 aa14.19□□□□□ -0.14
SFSWAP-208ENST00000539506 CRNKL1Q9BZJ0 848 aaKnown RBP14.19□□□□□ -0.14
SFSWAP-208ENST00000539506 AKR1B15C9JRZ8 316 aaPredicted RBP14.19□□□□□ -0.14
SFSWAP-208ENST00000539506 STX10O60499 249 aa14.19□□□□□ -0.14
SFSWAP-208ENST00000539506 CCDC175P0C221 793 aa14.19□□□□□ -0.14
SFSWAP-208ENST00000539506 MCM7P33993 719 aa14.19□□□□□ -0.14
SFSWAP-208ENST00000539506 FXR1P51114 621 aaKnown RBP eCLIP14.19□□□□□ -0.14
SFSWAP-208ENST00000539506 DHX8Q14562 1220 aaKnown RBP14.19□□□□□ -0.14
SFSWAP-208ENST00000539506 PFKFB3Q16875 520 aaPredicted RBP14.19□□□□□ -0.14
SFSWAP-208ENST00000539506 GPKOWQ92917 476 aaPredicted RBP eCLIP14.19□□□□□ -0.14
SFSWAP-208ENST00000539506 FERMT2Q96AC1 680 aa14.19□□□□□ -0.14
SFSWAP-208ENST00000539506 SLF1Q9BQI6 1058 aa14.19□□□□□ -0.14
SFSWAP-208ENST00000539506 ATP8A2Q9NTI2 1148 aa14.19□□□□□ -0.14
SFSWAP-208ENST00000539506 MCM9Q9NXL9 1143 aa14.19□□□□□ -0.14
SFSWAP-208ENST00000539506 GOLGB1Q14789 3259 aaKnown RBP14.18□□□□□ -0.14
SFSWAP-208ENST00000539506 CDKAL1Q5VV42 579 aa14.18□□□□□ -0.14
SFSWAP-208ENST00000539506 PDXDC2PQ6P474 469 aa14.18□□□□□ -0.14
SFSWAP-208ENST00000539506 C4orf32Q8N8J7 132 aa14.18□□□□□ -0.14
SFSWAP-208ENST00000539506 CTCFLQ8NI51 663 aaPredicted RBP14.18□□□□□ -0.14
SFSWAP-208ENST00000539506 RASGRP4Q8TDF6 673 aa14.18□□□□□ -0.14
SFSWAP-208ENST00000539506 RABGGTAQ92696 567 aa14.18□□□□□ -0.14
SFSWAP-208ENST00000539506 GPR101Q96P66 508 aaPredicted RBP14.18□□□□□ -0.14
SFSWAP-208ENST00000539506 RASSF4Q9H2L5 321 aa14.18□□□□□ -0.14
SFSWAP-208ENST00000539506 DACH1Q9UI36 760 aa14.18□□□□□ -0.14
SFSWAP-208ENST00000539506 TSPY2A6NKD2 308 aa14.18□□□□□ -0.14
SFSWAP-208ENST00000539506 GNPATO15228 680 aa14.18□□□□□ -0.14
SFSWAP-208ENST00000539506 NLRP5P59047 1200 aa14.18□□□□□ -0.14
SFSWAP-208ENST00000539506 SBK1Q52WX2 424 aa14.18□□□□□ -0.14
SFSWAP-208ENST00000539506 RASGRP2Q7LDG7 609 aa14.18□□□□□ -0.14
SFSWAP-208ENST00000539506 POLD4Q9HCU8 107 aa14.18□□□□□ -0.14
SFSWAP-208ENST00000539506 GUCA1BQ9UMX6 200 aa14.18□□□□□ -0.14
SFSWAP-208ENST00000539506 RRP15Q9Y3B9 282 aaKnown RBP14.18□□□□□ -0.14
SFSWAP-208ENST00000539506 ADGRG1Q9Y653 693 aa14.18□□□□□ -0.14
SFSWAP-208ENST00000539506 KIF5CO60282 957 aa14.17□□□□□ -0.14
SFSWAP-208ENST00000539506 PBX1P40424 430 aa14.17□□□□□ -0.14
SFSWAP-208ENST00000539506 SPATA1Q5VX52 437 aa14.17□□□□□ -0.14
SFSWAP-208ENST00000539506 PDS5AQ29RF7 1337 aaKnown RBP14.17□□□□□ -0.14
SFSWAP-208ENST00000539506 USP17L3A6NCW0 530 aa14.17□□□□□ -0.14
SFSWAP-208ENST00000539506 USP17L4A6NCW7 530 aa14.17□□□□□ -0.14
SFSWAP-208ENST00000539506 RPS6KA4O75676 772 aa14.17□□□□□ -0.14
SFSWAP-208ENST00000539506 TPM1P09493 284 aa14.17□□□□□ -0.14
SFSWAP-208ENST00000539506 TFAP4Q01664 338 aa14.17□□□□□ -0.14
SFSWAP-208ENST00000539506 DIXDC1Q155Q3 683 aa14.17□□□□□ -0.14
SFSWAP-208ENST00000539506 USP17L1Q7RTZ2 530 aa14.17□□□□□ -0.14
SFSWAP-208ENST00000539506 SH3RF3Q8TEJ3 882 aaPredicted RBP14.17□□□□□ -0.14
SFSWAP-208ENST00000539506 UBXN6Q9BZV1 441 aa14.17□□□□□ -0.14
SFSWAP-208ENST00000539506 ADD3Q9UEY8 706 aaKnown RBP14.17□□□□□ -0.14
SFSWAP-208ENST00000539506 LAMB1P07942 1786 aa14.17□□□□□ -0.14
SFSWAP-208ENST00000539506 NFIXQ14938 502 aa14.17□□□□□ -0.14
SFSWAP-208ENST00000539506 KCTD19Q17RG1 926 aaPredicted RBP14.17□□□□□ -0.14
SFSWAP-208ENST00000539506 BEND6Q5SZJ8 279 aaPredicted RBP14.17□□□□□ -0.14
SFSWAP-208ENST00000539506 SRGAP1Q7Z6B7 1085 aa14.17□□□□□ -0.14
SFSWAP-208ENST00000539506 FCHSD1Q86WN1 690 aa14.17□□□□□ -0.14
SFSWAP-208ENST00000539506 SLC44A5Q8NCS7 719 aa14.17□□□□□ -0.14
SFSWAP-208ENST00000539506 ARHGEF1Q92888 912 aaKnown RBP14.17□□□□□ -0.14
SFSWAP-208ENST00000539506 GSDMAQ96QA5 445 aa14.17□□□□□ -0.14
SFSWAP-208ENST00000539506 ARPP21Q9UBL0 812 aaPredicted RBP14.17□□□□□ -0.14
SFSWAP-208ENST00000539506 SYNRGQ9UMZ2 1314 aa14.17□□□□□ -0.14
SFSWAP-208ENST00000539506 ZNF831Q5JPB2 1677 aa14.17□□□□□ -0.14
SFSWAP-208ENST00000539506 C12orf60Q5U649 245 aa14.16□□□□□ -0.14
SFSWAP-208ENST00000539506 TTC19Q6DKK2 380 aaPredicted RBP14.16□□□□□ -0.14
SFSWAP-208ENST00000539506 TNRC6CQ9HCJ0 1690 aaKnown RBP14.16□□□□□ -0.14
SFSWAP-208ENST00000539506 LRRIQ3A6PVS8 624 aaPredicted RBP14.16□□□□□ -0.14
SFSWAP-208ENST00000539506 CYTH3O43739 400 aa14.16□□□□□ -0.14
SFSWAP-208ENST00000539506 LEKR1Q6ZMV7 388 aa14.16□□□□□ -0.14
SFSWAP-208ENST00000539506 ANKRD2Q9GZV1 360 aa14.16□□□□□ -0.14
SFSWAP-208ENST00000539506 BRMS1Q9HCU9 246 aa14.16□□□□□ -0.14
SFSWAP-208ENST00000539506 M0R2N6 131 aa14.15□□□□□ -0.14
SFSWAP-208ENST00000539506 CHP1Q99653 195 aa14.15□□□□□ -0.14
SFSWAP-208ENST00000539506 NYXQ9GZU5 481 aa14.15□□□□□ -0.14
SFSWAP-208ENST00000539506 TAB2Q9NYJ8 693 aa14.15□□□□□ -0.14
SFSWAP-208ENST00000539506 MAD2L2Q9UI95 211 aa14.15□□□□□ -0.14
SFSWAP-208ENST00000539506 CTNND2Q9UQB3 1225 aa14.15□□□□□ -0.14
SFSWAP-208ENST00000539506 COL24A1Q17RW2 1714 aa14.15□□□□□ -0.14
SFSWAP-208ENST00000539506 LRRC15Q8TF66 581 aa14.15□□□□□ -0.14
SFSWAP-208ENST00000539506 PLIN2Q99541 437 aa14.15□□□□□ -0.14
SFSWAP-208ENST00000539506 NUP88Q99567 741 aaPredicted RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 179.5 ms