RNA–Protein interactions for RNA: ENST00000534086.1

AP003555.3-201, humanhuman

TSL 4 BASIC

Gene AP003555.3, Length 432 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003555.3-201ENST00000534086 BMP3P12645 472 aa21.05■□□□□ 0.96
AP003555.3-201ENST00000534086 SNRNP48Q6IEG0 339 aaKnown RBP21.05■□□□□ 0.96
AP003555.3-201ENST00000534086 C7orf61Q8IZ16 206 aa21.05■□□□□ 0.96
AP003555.3-201ENST00000534086 CPXCR1Q8N123 301 aa21.05■□□□□ 0.96
AP003555.3-201ENST00000534086 STX8Q9UNK0 236 aa21.05■□□□□ 0.96
AP003555.3-201ENST00000534086 PFASO15067 1338 aa21.04■□□□□ 0.96
AP003555.3-201ENST00000534086 ALPK3Q96L96 1907 aa21.04■□□□□ 0.96
AP003555.3-201ENST00000534086 PGK2P07205 417 aa21.04■□□□□ 0.96
AP003555.3-201ENST00000534086 COL6A1P12109 1028 aa21.04■□□□□ 0.96
AP003555.3-201ENST00000534086 SDSP20132 328 aa21.04■□□□□ 0.96
AP003555.3-201ENST00000534086 SLC4A3P48751 1232 aa21.04■□□□□ 0.96
AP003555.3-201ENST00000534086 ZNF589Q86UQ0 364 aaPredicted RBP21.04■□□□□ 0.96
AP003555.3-201ENST00000534086 ISY1Q9ULR0 285 aaKnown RBP21.04■□□□□ 0.96
AP003555.3-201ENST00000534086 TACC3Q9Y6A5 838 aa21.04■□□□□ 0.96
AP003555.3-201ENST00000534086 CCDC171Q6TFL3 1326 aa21.04■□□□□ 0.96
AP003555.3-201ENST00000534086 ATP2A1O14983 1001 aa21.03■□□□□ 0.96
AP003555.3-201ENST00000534086 ORC4O43929 436 aa21.03■□□□□ 0.96
AP003555.3-201ENST00000534086 MFAP1P55081 439 aaKnown RBP21.03■□□□□ 0.96
AP003555.3-201ENST00000534086 PRAMEF19Q5SWL8 479 aa21.03■□□□□ 0.96
AP003555.3-201ENST00000534086 SLC38A10Q9HBR0 1119 aa21.03■□□□□ 0.96
AP003555.3-201ENST00000534086 RAVER2Q9HCJ3 691 aaKnown RBP21.03■□□□□ 0.96
AP003555.3-201ENST00000534086 IL17RBQ9NRM6 502 aa21.03■□□□□ 0.96
AP003555.3-201ENST00000534086 TOMM22Q9NS69 142 aa21.03■□□□□ 0.96
AP003555.3-201ENST00000534086 RBM27Q9P2N5 1060 aaKnown RBP21.03■□□□□ 0.96
AP003555.3-201ENST00000534086 DIS3Q9Y2L1 958 aaKnown RBP21.03■□□□□ 0.96
AP003555.3-201ENST00000534086 RIPK3Q9Y572 518 aa21.03■□□□□ 0.96
AP003555.3-201ENST00000534086 FRMPD3Q5JV73 1810 aa21.02■□□□□ 0.96
AP003555.3-201ENST00000534086 TMEM232C9JQI7 657 aa21.02■□□□□ 0.96
AP003555.3-201ENST00000534086 SEPT4O43236 478 aa21.02■□□□□ 0.96
AP003555.3-201ENST00000534086 NMT2O60551 498 aa21.02■□□□□ 0.96
AP003555.3-201ENST00000534086 FGRP09769 529 aa21.02■□□□□ 0.96
AP003555.3-201ENST00000534086 MCCP23508 829 aa21.02■□□□□ 0.96
AP003555.3-201ENST00000534086 SLC1A4P43007 532 aa21.02■□□□□ 0.96
AP003555.3-201ENST00000534086 ZNF792Q3KQV3 632 aa21.02■□□□□ 0.96
AP003555.3-201ENST00000534086 CHURC1Q8WUH1 139 aa21.02■□□□□ 0.96
AP003555.3-201ENST00000534086 CHMP4CQ96CF2 233 aa21.02■□□□□ 0.96
AP003555.3-201ENST00000534086 DDX11Q96FC9 970 aa21.02■□□□□ 0.96
AP003555.3-201ENST00000534086 GMCL1Q96IK5 515 aa21.02■□□□□ 0.96
AP003555.3-201ENST00000534086 DNAH12Q6ZR08 3092 aa21.01■□□□□ 0.95
AP003555.3-201ENST00000534086 FDX1P10109 184 aa21.01■□□□□ 0.95
AP003555.3-201ENST00000534086 FXR1P51114 621 aaKnown RBP eCLIP21.01■□□□□ 0.95
AP003555.3-201ENST00000534086 STAT2P52630 851 aa21.01■□□□□ 0.95
AP003555.3-201ENST00000534086 IKQ13123 557 aaPredicted RBP21.01■□□□□ 0.95
AP003555.3-201ENST00000534086 RRP12Q5JTH9 1297 aaKnown RBP21.01■□□□□ 0.95
AP003555.3-201ENST00000534086 ANO1Q5XXA6 986 aa21.01■□□□□ 0.95
AP003555.3-201ENST00000534086 FAM160B2Q86V87 743 aa21.01■□□□□ 0.95
AP003555.3-201ENST00000534086 ARRDC4Q8NCT1 418 aa21.01■□□□□ 0.95
AP003555.3-201ENST00000534086 TINF2Q9BSI4 451 aa21.01■□□□□ 0.95
AP003555.3-201ENST00000534086 SENP6Q9GZR1 1112 aaPredicted RBP21.01■□□□□ 0.95
AP003555.3-201ENST00000534086 ZMYND8Q9ULU4 1186 aaPredicted RBP21.01■□□□□ 0.95
AP003555.3-201ENST00000534086 ZMYM6O95789 1325 aa21.01■□□□□ 0.95
AP003555.3-201ENST00000534086 OAZ1P54368 228 aa21■□□□□ 0.95
AP003555.3-201ENST00000534086 STAG1Q8WVM7 1258 aa21■□□□□ 0.95
AP003555.3-201ENST00000534086 PRO3102Q9H379 93 aa21■□□□□ 0.95
AP003555.3-201ENST00000534086 NRBP1Q9UHY1 535 aa21■□□□□ 0.95
AP003555.3-201ENST00000534086 PLXNA1Q9UIW2 1896 aa20.99■□□□□ 0.95
AP003555.3-201ENST00000534086 DNM1LO00429 736 aa20.99■□□□□ 0.95
AP003555.3-201ENST00000534086 HAND2P61296 217 aa20.99■□□□□ 0.95
AP003555.3-201ENST00000534086 LRRC26Q2I0M4 334 aa20.99■□□□□ 0.95
AP003555.3-201ENST00000534086 GJC2Q5T442 439 aaPredicted RBP20.99■□□□□ 0.95
AP003555.3-201ENST00000534086 RCSD1Q6JBY9 416 aa20.99■□□□□ 0.95
AP003555.3-201ENST00000534086 CWC27Q6UX04 472 aaKnown RBP20.99■□□□□ 0.95
AP003555.3-201ENST00000534086 DIAPH3Q9NSV4 1193 aa20.99■□□□□ 0.95
AP003555.3-201ENST00000534086 HIP1O00291 1037 aa20.98■□□□□ 0.95
AP003555.3-201ENST00000534086 PLA2G6O60733 806 aa20.98■□□□□ 0.95
AP003555.3-201ENST00000534086 NOVP48745 357 aa20.98■□□□□ 0.95
AP003555.3-201ENST00000534086 KCTD1Q719H9 257 aa20.98■□□□□ 0.95
AP003555.3-201ENST00000534086 CHST13Q8NET6 341 aa20.98■□□□□ 0.95
AP003555.3-201ENST00000534086 FBXO40Q9UH90 709 aa20.98■□□□□ 0.95
AP003555.3-201ENST00000534086 MTMR7Q9Y216 660 aa20.98■□□□□ 0.95
AP003555.3-201ENST00000534086 TRIOBPQ9H2D6 2365 aa20.98■□□□□ 0.95
AP003555.3-201ENST00000534086 RANBP2P49792 3224 aaKnown RBP20.98■□□□□ 0.95
AP003555.3-201ENST00000534086 DNAJC25-GNG10A0A024R161 153 aa20.97■□□□□ 0.95
AP003555.3-201ENST00000534086 KBTBD13C9JR72 458 aa20.97■□□□□ 0.95
AP003555.3-201ENST00000534086 MYCNP04198 464 aaPredicted RBP20.97■□□□□ 0.95
AP003555.3-201ENST00000534086 SYN1P17600 705 aa20.97■□□□□ 0.95
AP003555.3-201ENST00000534086 IRX6P78412 446 aaPredicted RBP20.97■□□□□ 0.95
AP003555.3-201ENST00000534086 AKNAD1Q5T1N1 836 aa20.97■□□□□ 0.95
AP003555.3-201ENST00000534086 MFSD6Q6ZSS7 791 aa20.97■□□□□ 0.95
AP003555.3-201ENST00000534086 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.97■□□□□ 0.95
AP003555.3-201ENST00000534086 ANKRD35Q8N283 1001 aa20.97■□□□□ 0.95
AP003555.3-201ENST00000534086 TCP11L1Q9NUJ3 509 aa20.97■□□□□ 0.95
AP003555.3-201ENST00000534086 SMCHD1A6NHR9 2005 aa20.96■□□□□ 0.95
AP003555.3-201ENST00000534086 PCP11498 1178 aaKnown RBP20.96■□□□□ 0.95
AP003555.3-201ENST00000534086 TAL1P17542 331 aaPredicted RBP20.96■□□□□ 0.95
AP003555.3-201ENST00000534086 MSL3Q8N5Y2 521 aaKnown RBP20.96■□□□□ 0.95
AP003555.3-201ENST00000534086 HOMER2Q9NSB8 354 aa20.96■□□□□ 0.95
AP003555.3-201ENST00000534086 CNPY2Q9Y2B0 182 aa20.96■□□□□ 0.95
AP003555.3-201ENST00000534086 ZNF213O14771 459 aa20.95■□□□□ 0.94
AP003555.3-201ENST00000534086 RARBP10826 455 aa20.95■□□□□ 0.94
AP003555.3-201ENST00000534086 TOP1P11387 765 aaKnown RBP20.95■□□□□ 0.94
AP003555.3-201ENST00000534086 ATN1P54259 1190 aaPredicted RBP20.95■□□□□ 0.94
AP003555.3-201ENST00000534086 CCDC96Q2M329 555 aa20.95■□□□□ 0.94
AP003555.3-201ENST00000534086 DCAF4Q8WV16 495 aa20.95■□□□□ 0.94
AP003555.3-201ENST00000534086 AGBL1Q96MI9 1066 aa20.95■□□□□ 0.94
AP003555.3-201ENST00000534086 GDF15Q99988 308 aa20.95■□□□□ 0.94
AP003555.3-201ENST00000534086 TMEM47Q9BQJ4 181 aa20.95■□□□□ 0.94
AP003555.3-201ENST00000534086 RNF41Q9H4P4 317 aaPredicted RBP20.95■□□□□ 0.94
AP003555.3-201ENST00000534086 A0A1W2PPC1 479 aa20.94■□□□□ 0.94
AP003555.3-201ENST00000534086 ZNF865P0CJ78 1059 aaPredicted RBP20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms