RNA–Protein interactions for RNA: ENST00000522227.5

CTNNA1-234, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-234ENST00000522227 SNAI1O95863 264 aaPredicted RBP13.53□□□□□ -0.24
CTNNA1-234ENST00000522227 KCNA5P22460 613 aa13.53□□□□□ -0.24
CTNNA1-234ENST00000522227 SLC4A3P48751 1232 aa13.53□□□□□ -0.24
CTNNA1-234ENST00000522227 PPP4CP60510 307 aa13.53□□□□□ -0.24
CTNNA1-234ENST00000522227 CCDC184Q52MB2 194 aa13.53□□□□□ -0.24
CTNNA1-234ENST00000522227 HFE2Q6ZVN8 426 aa13.53□□□□□ -0.24
CTNNA1-234ENST00000522227 WDR63Q8IWG1 891 aa13.53□□□□□ -0.24
CTNNA1-234ENST00000522227 MRPL50Q8N5N7 158 aaKnown RBP13.53□□□□□ -0.24
CTNNA1-234ENST00000522227 NOC4LQ9BVI4 516 aaKnown RBP13.53□□□□□ -0.24
CTNNA1-234ENST00000522227 KCNH6Q9H252 994 aa13.53□□□□□ -0.24
CTNNA1-234ENST00000522227 UBE2ZQ9H832 354 aaPredicted RBP13.53□□□□□ -0.24
CTNNA1-234ENST00000522227 SERPINB13Q9UIV8 391 aa13.53□□□□□ -0.24
CTNNA1-234ENST00000522227 ROBO3Q96MS0 1386 aa13.53□□□□□ -0.24
CTNNA1-234ENST00000522227 SLC25A27O95847 323 aa13.52□□□□□ -0.25
CTNNA1-234ENST00000522227 CXCL17Q6UXB2 119 aa13.52□□□□□ -0.25
CTNNA1-234ENST00000522227 MIGA1Q8NAN2 632 aa13.52□□□□□ -0.25
CTNNA1-234ENST00000522227 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.52□□□□□ -0.25
CTNNA1-234ENST00000522227 MYH1P12882 1939 aa13.51□□□□□ -0.25
CTNNA1-234ENST00000522227 CST5P28325 142 aaPredicted RBP13.51□□□□□ -0.25
CTNNA1-234ENST00000522227 ARID4AP29374 1257 aaPredicted RBP13.51□□□□□ -0.25
CTNNA1-234ENST00000522227 SHMT1P34896 483 aa13.51□□□□□ -0.25
CTNNA1-234ENST00000522227 PTCRAQ6ISU1 281 aaPredicted RBP13.51□□□□□ -0.25
CTNNA1-234ENST00000522227 NOL8Q76FK4 1167 aaKnown RBP13.51□□□□□ -0.25
CTNNA1-234ENST00000522227 CLEC10AQ8IUN9 316 aa13.51□□□□□ -0.25
CTNNA1-234ENST00000522227 VWCEQ96DN2 955 aa13.51□□□□□ -0.25
CTNNA1-234ENST00000522227 MTUS1Q9ULD2 1270 aa13.51□□□□□ -0.25
CTNNA1-234ENST00000522227 DIS3Q9Y2L1 958 aaKnown RBP13.51□□□□□ -0.25
CTNNA1-234ENST00000522227 WDFY4Q6ZS81 3184 aa13.51□□□□□ -0.25
CTNNA1-234ENST00000522227 FOCADQ5VW36 1801 aa13.5□□□□□ -0.25
CTNNA1-234ENST00000522227 BRWD1Q9NSI6 2320 aa13.5□□□□□ -0.25
CTNNA1-234ENST00000522227 ZNF536O15090 1300 aa13.5□□□□□ -0.25
CTNNA1-234ENST00000522227 B4GALT4O60513 344 aa13.5□□□□□ -0.25
CTNNA1-234ENST00000522227 LPXNO60711 386 aa13.5□□□□□ -0.25
CTNNA1-234ENST00000522227 CYP7A1P22680 504 aa13.5□□□□□ -0.25
CTNNA1-234ENST00000522227 PLCD1P51178 756 aa13.5□□□□□ -0.25
CTNNA1-234ENST00000522227 ACVR2BQ13705 512 aa13.5□□□□□ -0.25
CTNNA1-234ENST00000522227 CCDC144BQ3MJ40 725 aa13.5□□□□□ -0.25
CTNNA1-234ENST00000522227 PRSS33Q8NF86 280 aa13.5□□□□□ -0.25
CTNNA1-234ENST00000522227 DDX11Q96FC9 970 aa13.5□□□□□ -0.25
CTNNA1-234ENST00000522227 COPRSQ9NQ92 184 aa13.5□□□□□ -0.25
CTNNA1-234ENST00000522227 FBXO28Q9NVF7 368 aa13.5□□□□□ -0.25
CTNNA1-234ENST00000522227 TRANK1O15050 2925 aa13.5□□□□□ -0.25
CTNNA1-234ENST00000522227 RAD21O60216 631 aa13.49□□□□□ -0.25
CTNNA1-234ENST00000522227 STAT3P40763 770 aa13.49□□□□□ -0.25
CTNNA1-234ENST00000522227 GJA9P57773 515 aa13.49□□□□□ -0.25
CTNNA1-234ENST00000522227 PSMC6P62333 389 aa13.49□□□□□ -0.25
CTNNA1-234ENST00000522227 EVX2Q03828 476 aa13.49□□□□□ -0.25
CTNNA1-234ENST00000522227 ITGA7Q13683 1181 aa13.49□□□□□ -0.25
CTNNA1-234ENST00000522227 LEXMQ3ZCV2 418 aa13.49□□□□□ -0.25
CTNNA1-234ENST00000522227 EP400NLQ6ZTU2 488 aa13.49□□□□□ -0.25
CTNNA1-234ENST00000522227 TTC6Q86TZ1 520 aa13.49□□□□□ -0.25
CTNNA1-234ENST00000522227 RIOX2Q8IUF8 465 aa13.49□□□□□ -0.25
CTNNA1-234ENST00000522227 FAM86C1Q9NVL1 165 aa13.49□□□□□ -0.25
CTNNA1-234ENST00000522227 COL4A4P53420 1690 aaPredicted RBP13.49□□□□□ -0.25
CTNNA1-234ENST00000522227 PTPRCP08575 1304 aa13.48□□□□□ -0.25
CTNNA1-234ENST00000522227 KIF28PB7ZC32 967 aa13.48□□□□□ -0.25
CTNNA1-234ENST00000522227 H3BQ06 376 aaPredicted RBP13.48□□□□□ -0.25
CTNNA1-234ENST00000522227 UQCRFS1P1P0C7P4 283 aa13.48□□□□□ -0.25
CTNNA1-234ENST00000522227 CYP2C9P11712 490 aa13.48□□□□□ -0.25
CTNNA1-234ENST00000522227 PTGS1P23219 599 aa13.48□□□□□ -0.25
CTNNA1-234ENST00000522227 TTC39AQ5SRH9 613 aa13.48□□□□□ -0.25
CTNNA1-234ENST00000522227 TMCO2Q7Z6W1 182 aaPredicted RBP13.48□□□□□ -0.25
CTNNA1-234ENST00000522227 MFSD14AQ96MC6 490 aa13.48□□□□□ -0.25
CTNNA1-234ENST00000522227 AGBL1Q96MI9 1066 aa13.48□□□□□ -0.25
CTNNA1-234ENST00000522227 UPF3AQ9H1J1 476 aaKnown RBP13.48□□□□□ -0.25
CTNNA1-234ENST00000522227 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.48□□□□□ -0.25
CTNNA1-234ENST00000522227 COL11A1P12107 1806 aaPredicted RBP13.48□□□□□ -0.25
CTNNA1-234ENST00000522227 GRIN2DO15399 1336 aa13.47□□□□□ -0.25
CTNNA1-234ENST00000522227 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.47□□□□□ -0.25
CTNNA1-234ENST00000522227 LCHNA4D1U4 455 aa13.47□□□□□ -0.25
CTNNA1-234ENST00000522227 CTAGE5O15320 804 aa13.47□□□□□ -0.25
CTNNA1-234ENST00000522227 GFRA3O60609 400 aa13.47□□□□□ -0.25
CTNNA1-234ENST00000522227 POLR3DP05423 398 aaPredicted RBP13.47□□□□□ -0.25
CTNNA1-234ENST00000522227 ACTN1P12814 892 aa13.47□□□□□ -0.25
CTNNA1-234ENST00000522227 IER5LQ5T953 404 aa13.47□□□□□ -0.25
CTNNA1-234ENST00000522227 HERC6Q8IVU3 1022 aa13.47□□□□□ -0.25
CTNNA1-234ENST00000522227 SLC9A7Q96T83 725 aa13.47□□□□□ -0.25
CTNNA1-234ENST00000522227 FTOQ9C0B1 505 aaKnown RBP eCLIP13.47□□□□□ -0.25
CTNNA1-234ENST00000522227 EHD4Q9H223 541 aa13.47□□□□□ -0.25
CTNNA1-234ENST00000522227 PIH1D3Q9NQM4 214 aaKnown RBP13.47□□□□□ -0.25
CTNNA1-234ENST00000522227 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.46□□□□□ -0.25
CTNNA1-234ENST00000522227 POTEB3A0JP26 581 aa13.46□□□□□ -0.25
CTNNA1-234ENST00000522227 GRXCR2A6NFK2 248 aa13.46□□□□□ -0.25
CTNNA1-234ENST00000522227 CYP2E1P05181 493 aaPredicted RBP13.46□□□□□ -0.25
CTNNA1-234ENST00000522227 FOXK2Q01167 660 aa13.46□□□□□ -0.25
CTNNA1-234ENST00000522227 POTEBQ6S5H4 581 aa13.46□□□□□ -0.25
CTNNA1-234ENST00000522227 SLC43A3Q8NBI5 491 aa13.46□□□□□ -0.25
CTNNA1-234ENST00000522227 SCN5AQ14524 2016 aa13.46□□□□□ -0.26
CTNNA1-234ENST00000522227 ZNF318Q5VUA4 2279 aa13.45□□□□□ -0.26
CTNNA1-234ENST00000522227 MYO5AQ9Y4I1 1855 aaKnown RBP13.45□□□□□ -0.26
CTNNA1-234ENST00000522227 ZAP70P43403 619 aa13.45□□□□□ -0.26
CTNNA1-234ENST00000522227 PTPN5P54829 565 aa13.45□□□□□ -0.26
CTNNA1-234ENST00000522227 PPP1R13LQ8WUF5 828 aa13.45□□□□□ -0.26
CTNNA1-234ENST00000522227 ZBED2Q9BTP6 218 aa13.45□□□□□ -0.26
CTNNA1-234ENST00000522227 VCPKMTQ9H867 229 aa13.45□□□□□ -0.26
CTNNA1-234ENST00000522227 TRMT13Q9NUP7 481 aaKnown RBP13.45□□□□□ -0.26
CTNNA1-234ENST00000522227 ZDBF2Q9HCK1 2354 aa13.45□□□□□ -0.26
CTNNA1-234ENST00000522227 ASTN1O14525 1302 aa13.44□□□□□ -0.26
CTNNA1-234ENST00000522227 MCM3APO60318 1980 aa13.44□□□□□ -0.26
CTNNA1-234ENST00000522227 RBAK-RBAKDNI3L0D1 243 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms