RNA–Protein interactions for RNA: ENST00000522165.5

COL13A1-214, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-214ENST00000522165 PRR29P0C7W0 189 aa29.48■■■□□ 2.31
COL13A1-214ENST00000522165 NCAPHQ15003 741 aa29.48■■■□□ 2.31
COL13A1-214ENST00000522165 CCDC93Q567U6 631 aa29.48■■■□□ 2.31
COL13A1-214ENST00000522165 SH3BP5LQ7L8J4 393 aa29.48■■■□□ 2.31
COL13A1-214ENST00000522165 MPHOSPH10O00566 681 aaKnown RBP29.47■■■□□ 2.31
COL13A1-214ENST00000522165 SARSP49591 514 aaKnown RBP29.47■■■□□ 2.31
COL13A1-214ENST00000522165 IL17AQ16552 155 aa29.47■■■□□ 2.31
COL13A1-214ENST00000522165 RTKN2Q8IZC4 609 aa29.47■■■□□ 2.31
COL13A1-214ENST00000522165 DHX58Q96C10 678 aa29.47■■■□□ 2.31
COL13A1-214ENST00000522165 KCNF1Q9H3M0 494 aa29.47■■■□□ 2.31
COL13A1-214ENST00000522165 PPP4R3BQ5MIZ7 849 aa29.46■■■□□ 2.31
COL13A1-214ENST00000522165 GRAMD1CQ8IYS0 662 aa29.46■■■□□ 2.31
COL13A1-214ENST00000522165 C6orf50Q9HD87 102 aa29.46■■■□□ 2.31
COL13A1-214ENST00000522165 MAN1B1Q9UKM7 699 aa29.46■■■□□ 2.31
COL13A1-214ENST00000522165 SMCO2A6NFE2 343 aa29.45■■■□□ 2.31
COL13A1-214ENST00000522165 hCG_1984214I3L0E3 225 aa29.45■■■□□ 2.31
COL13A1-214ENST00000522165 SLFN14P0C7P3 912 aa29.45■■■□□ 2.31
COL13A1-214ENST00000522165 GNA11P29992 359 aa29.45■■■□□ 2.31
COL13A1-214ENST00000522165 ZNF543Q08ER8 600 aa29.45■■■□□ 2.31
COL13A1-214ENST00000522165 INF2Q27J81 1249 aa29.45■■■□□ 2.31
COL13A1-214ENST00000522165 ZNF713Q8N859 430 aaPredicted RBP29.45■■■□□ 2.31
COL13A1-214ENST00000522165 SLC16A10Q8TF71 515 aa29.45■■■□□ 2.31
COL13A1-214ENST00000522165 SMARCE1Q969G3 411 aa29.45■■■□□ 2.31
COL13A1-214ENST00000522165 PSMD1Q99460 953 aa29.45■■■□□ 2.31
COL13A1-214ENST00000522165 KCNA3P22001 575 aa29.44■■■□□ 2.3
COL13A1-214ENST00000522165 BMP6P22004 513 aa29.44■■■□□ 2.3
COL13A1-214ENST00000522165 PTGS1P23219 599 aa29.44■■■□□ 2.3
COL13A1-214ENST00000522165 CFAP100Q494V2 611 aa29.44■■■□□ 2.3
COL13A1-214ENST00000522165 PSME4Q14997 1843 aa29.44■■■□□ 2.3
COL13A1-214ENST00000522165 TPM4P67936 248 aa29.44■■■□□ 2.3
COL13A1-214ENST00000522165 SOGA3Q5TF21 947 aa29.44■■■□□ 2.3
COL13A1-214ENST00000522165 CCDC186Q7Z3E2 898 aa29.44■■■□□ 2.3
COL13A1-214ENST00000522165 KRT25Q7Z3Z0 450 aa29.44■■■□□ 2.3
COL13A1-214ENST00000522165 ZSCAN29Q8IWY8 852 aaPredicted RBP29.44■■■□□ 2.3
COL13A1-214ENST00000522165 SPATA20Q8TB22 786 aa29.44■■■□□ 2.3
COL13A1-214ENST00000522165 CCDC34Q96HJ3 373 aa29.44■■■□□ 2.3
COL13A1-214ENST00000522165 TDRD3Q9H7E2 651 aaKnown RBP29.44■■■□□ 2.3
COL13A1-214ENST00000522165 GPCPD1Q9NPB8 672 aa29.44■■■□□ 2.3
COL13A1-214ENST00000522165 NRBP1Q9UHY1 535 aa29.44■■■□□ 2.3
COL13A1-214ENST00000522165 ESYT2A0FGR8 921 aa29.43■■■□□ 2.3
COL13A1-214ENST00000522165 DPEP1P16444 411 aa29.43■■■□□ 2.3
COL13A1-214ENST00000522165 SH3RF1Q7Z6J0 888 aa29.43■■■□□ 2.3
COL13A1-214ENST00000522165 MYH4Q9Y623 1939 aa29.43■■■□□ 2.3
COL13A1-214ENST00000522165 FAM196BA6NMK8 535 aa29.43■■■□□ 2.3
COL13A1-214ENST00000522165 LONP1P36776 959 aaKnown RBP29.42■■■□□ 2.3
COL13A1-214ENST00000522165 MORC3Q14149 939 aa29.42■■■□□ 2.3
COL13A1-214ENST00000522165 CERKLQ49MI3 558 aaPredicted RBP29.42■■■□□ 2.3
COL13A1-214ENST00000522165 TRIML1Q8N9V2 468 aa29.42■■■□□ 2.3
COL13A1-214ENST00000522165 ENTPD3O75355 529 aa29.41■■■□□ 2.3
COL13A1-214ENST00000522165 OFD1O75665 1012 aa29.41■■■□□ 2.3
COL13A1-214ENST00000522165 ATP2B2Q01814 1243 aa29.41■■■□□ 2.3
COL13A1-214ENST00000522165 TATDN1Q6P1N9 297 aa29.41■■■□□ 2.3
COL13A1-214ENST00000522165 PAGE5Q96GU1 130 aa29.41■■■□□ 2.3
COL13A1-214ENST00000522165 PRMT6Q96LA8 375 aaPredicted RBP29.41■■■□□ 2.3
COL13A1-214ENST00000522165 MYL5Q02045 173 aa29.41■■■□□ 2.3
COL13A1-214ENST00000522165 GPATCH4Q5T3I0 446 aaKnown RBP29.41■■■□□ 2.3
COL13A1-214ENST00000522165 ATRNL1Q5VV63 1379 aa29.41■■■□□ 2.3
COL13A1-214ENST00000522165 NONOQ15233 471 aaKnown RBP eCLIP29.4■■■□□ 2.3
COL13A1-214ENST00000522165 TRIM34Q9BYJ4 488 aa29.4■■■□□ 2.3
COL13A1-214ENST00000522165 HSD3B7Q9H2F3 369 aa29.4■■■□□ 2.3
COL13A1-214ENST00000522165 E2F4Q16254 413 aa29.4■■■□□ 2.3
COL13A1-214ENST00000522165 RSBN1LQ6PCB5 846 aaPredicted RBP29.4■■■□□ 2.3
COL13A1-214ENST00000522165 PYM1Q9BRP8 204 aaKnown RBP29.4■■■□□ 2.3
COL13A1-214ENST00000522165 JMJD4Q9H9V9 463 aa29.4■■■□□ 2.3
COL13A1-214ENST00000522165 SMC2O95347 1197 aa29.39■■■□□ 2.3
COL13A1-214ENST00000522165 ADGRF4Q8IZF3 695 aa29.39■■■□□ 2.3
COL13A1-214ENST00000522165 MLKLQ8NB16 471 aa29.39■■■□□ 2.3
COL13A1-214ENST00000522165 MKL1Q969V6 931 aa29.39■■■□□ 2.3
COL13A1-214ENST00000522165 TMEM60Q9H2L4 133 aa29.39■■■□□ 2.3
COL13A1-214ENST00000522165 KANSL2Q9H9L4 492 aa29.39■■■□□ 2.3
COL13A1-214ENST00000522165 NYAP2Q9P242 653 aa29.39■■■□□ 2.3
COL13A1-214ENST00000522165 SHROOM1Q2M3G4 852 aaPredicted RBP29.38■■■□□ 2.29
COL13A1-214ENST00000522165 CCDC144BQ3MJ40 725 aa29.38■■■□□ 2.29
COL13A1-214ENST00000522165 TTBK2Q6IQ55 1244 aa29.38■■■□□ 2.29
COL13A1-214ENST00000522165 LARGE2Q8N3Y3 721 aa29.38■■■□□ 2.29
COL13A1-214ENST00000522165 IQUBQ8NA54 791 aa29.38■■■□□ 2.29
COL13A1-214ENST00000522165 COL2A1P02458 1487 aaPredicted RBP29.38■■■□□ 2.29
COL13A1-214ENST00000522165 PNMA6FA0A0J9YX94 578 aa29.38■■■□□ 2.29
COL13A1-214ENST00000522165 LAD1O00515 517 aa29.38■■■□□ 2.29
COL13A1-214ENST00000522165 AFMP43652 599 aa29.38■■■□□ 2.29
COL13A1-214ENST00000522165 CCDC96Q2M329 555 aa29.38■■■□□ 2.29
COL13A1-214ENST00000522165 ZNF277Q9NRM2 450 aaPredicted RBP29.38■■■□□ 2.29
COL13A1-214ENST00000522165 VIL1P09327 827 aaKnown RBP29.37■■■□□ 2.29
COL13A1-214ENST00000522165 EEF2P13639 858 aaKnown RBP29.37■■■□□ 2.29
COL13A1-214ENST00000522165 DTHD1Q6ZMT9 781 aa29.37■■■□□ 2.29
COL13A1-214ENST00000522165 REXO1Q8N1G1 1221 aaKnown RBP29.37■■■□□ 2.29
COL13A1-214ENST00000522165 COA7Q96BR5 231 aa29.37■■■□□ 2.29
COL13A1-214ENST00000522165 PSMD14O00487 310 aa29.36■■■□□ 2.29
COL13A1-214ENST00000522165 LMOD1P29536 600 aaPredicted RBP29.36■■■□□ 2.29
COL13A1-214ENST00000522165 PDZRN4Q6ZMN7 1036 aaPredicted RBP29.36■■■□□ 2.29
COL13A1-214ENST00000522165 GMLQ99445 158 aa29.36■■■□□ 2.29
COL13A1-214ENST00000522165 DACH1Q9UI36 760 aa29.36■■■□□ 2.29
COL13A1-214ENST00000522165 PYCARDQ9ULZ3 195 aa29.36■■■□□ 2.29
COL13A1-214ENST00000522165 COL4A5P29400 1685 aa29.36■■■□□ 2.29
COL13A1-214ENST00000522165 KIF13BQ9NQT8 1826 aa29.36■■■□□ 2.29
COL13A1-214ENST00000522165 RAD17O75943 681 aa29.36■■■□□ 2.29
COL13A1-214ENST00000522165 PRPHP41219 470 aa29.36■■■□□ 2.29
COL13A1-214ENST00000522165 DPYDQ12882 1025 aa29.36■■■□□ 2.29
COL13A1-214ENST00000522165 KIAA1524Q8TCG1 905 aa29.36■■■□□ 2.29
COL13A1-214ENST00000522165 PPP1R18Q6NYC8 613 aa29.35■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms