RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 ACTN4O43707 911 aaKnown RBP15.1■□□□□ 0.01
GPC1-209ENST00000495100 FAM196AQ6ZSG2 479 aa15.1■□□□□ 0.01
GPC1-209ENST00000495100 REXO1L1PQ8IX06 675 aa15.1■□□□□ 0.01
GPC1-209ENST00000495100 CNBD1Q8NA66 436 aa15.1■□□□□ 0.01
GPC1-209ENST00000495100 FBXO3Q9UK99 471 aa15.1■□□□□ 0.01
GPC1-209ENST00000495100 BCS1LQ9Y276 419 aa15.1■□□□□ 0.01
GPC1-209ENST00000495100 LMTK3Q96Q04 1460 aa15.1■□□□□ 0.01
GPC1-209ENST00000495100 POTEMA6NI47 508 aa15.1■□□□□ 0.01
GPC1-209ENST00000495100 CAPN2P17655 700 aa15.1■□□□□ 0.01
GPC1-209ENST00000495100 SPA17Q15506 151 aa15.1■□□□□ 0.01
GPC1-209ENST00000495100 KCTD1Q719H9 257 aa15.1■□□□□ 0.01
GPC1-209ENST00000495100 C2CD5Q86YS7 1000 aa15.1■□□□□ 0.01
GPC1-209ENST00000495100 C10orf67Q8IYJ2 551 aa15.1■□□□□ 0.01
GPC1-209ENST00000495100 LINC00116Q8NCU8 138 aa15.1■□□□□ 0.01
GPC1-209ENST00000495100 TMX4Q9H1E5 349 aaPredicted RBP15.1■□□□□ 0.01
GPC1-209ENST00000495100 HPSEQ9Y251 543 aa15.1■□□□□ 0.01
GPC1-209ENST00000495100 RNF225M0QZC1 329 aaPredicted RBP15.1■□□□□ 0.01
GPC1-209ENST00000495100 BTDP43251 543 aa15.1■□□□□ 0.01
GPC1-209ENST00000495100 SLC30A10Q6XR72 485 aa15.1■□□□□ 0.01
GPC1-209ENST00000495100 TMTC3Q6ZXV5 915 aa15.1■□□□□ 0.01
GPC1-209ENST00000495100 ENOX1Q8TC92 643 aaKnown RBP15.1■□□□□ 0.01
GPC1-209ENST00000495100 CCDC42Q96M95 316 aa15.1■□□□□ 0.01
GPC1-209ENST00000495100 HSD3B7Q9H2F3 369 aa15.1■□□□□ 0.01
GPC1-209ENST00000495100 RSPH14Q9UHP6 348 aa15.1■□□□□ 0.01
GPC1-209ENST00000495100 DUSP10Q9Y6W6 482 aa15.1■□□□□ 0.01
GPC1-209ENST00000495100 NALCNQ8IZF0 1738 aa15.09■□□□□ 0.01
GPC1-209ENST00000495100 RIC1Q4ADV7 1423 aa15.09■□□□□ 0.01
GPC1-209ENST00000495100 NTSR2O95665 410 aa15.09■□□□□ 0.01
GPC1-209ENST00000495100 CABP7Q86V35 215 aa15.09■□□□□ 0.01
GPC1-209ENST00000495100 CCDC155Q8N6L0 562 aa15.09■□□□□ 0.01
GPC1-209ENST00000495100 TIGD1Q96MW7 591 aa15.09■□□□□ 0.01
GPC1-209ENST00000495100 FAM205AQ6ZU69 1335 aa15.09■□□□□ 0.01
GPC1-209ENST00000495100 N4BP1O75113 896 aaKnown RBP15.09■□□□□ 0.01
GPC1-209ENST00000495100 PARP1P09874 1014 aaKnown RBP15.09■□□□□ 0.01
GPC1-209ENST00000495100 FGFR2P21802 821 aa15.09■□□□□ 0.01
GPC1-209ENST00000495100 PKN1Q16512 942 aa15.09■□□□□ 0.01
GPC1-209ENST00000495100 FCHSD1Q86WN1 690 aa15.09■□□□□ 0.01
GPC1-209ENST00000495100 RIN2Q8WYP3 895 aaPredicted RBP15.09■□□□□ 0.01
GPC1-209ENST00000495100 GTPBP4Q9BZE4 634 aaKnown RBP15.09■□□□□ 0.01
GPC1-209ENST00000495100 PRDM4Q9UKN5 801 aa15.09■□□□□ 0.01
GPC1-209ENST00000495100 PARP3Q9Y6F1 533 aa15.09■□□□□ 0.01
GPC1-209ENST00000495100 UBAP1LF5GYI3 381 aa15.09■□□□□ 0.01
GPC1-209ENST00000495100 ZNF185O15231 689 aa15.09■□□□□ 0.01
GPC1-209ENST00000495100 STX10O60499 249 aa15.09■□□□□ 0.01
GPC1-209ENST00000495100 PLCG1P19174 1290 aa15.09■□□□□ 0.01
GPC1-209ENST00000495100 UBXN2AP68543 259 aa15.09■□□□□ 0.01
GPC1-209ENST00000495100 SLC7A5Q01650 507 aa15.09■□□□□ 0.01
GPC1-209ENST00000495100 TROAPQ12815 778 aa15.09■□□□□ 0.01
GPC1-209ENST00000495100 SPICE1Q8N0Z3 855 aa15.09■□□□□ 0.01
GPC1-209ENST00000495100 FNBP4Q8N3X1 1017 aaPredicted RBP15.09■□□□□ 0.01
GPC1-209ENST00000495100 NSUN4Q96CB9 384 aaKnown RBP15.09■□□□□ 0.01
GPC1-209ENST00000495100 AGPAT5Q9NUQ2 364 aa15.09■□□□□ 0.01
GPC1-209ENST00000495100 CHMP2AO43633 222 aa15.08■□□□□ 0.01
GPC1-209ENST00000495100 CALM1P0DP23 149 aa15.08■□□□□ 0.01
GPC1-209ENST00000495100 CALM2P0DP24 149 aa15.08■□□□□ 0.01
GPC1-209ENST00000495100 CALM3P0DP25 149 aa15.08■□□□□ 0.01
GPC1-209ENST00000495100 PMS1P54277 932 aaKnown RBP15.08■□□□□ 0.01
GPC1-209ENST00000495100 TERF2Q15554 542 aa15.08■□□□□ 0.01
GPC1-209ENST00000495100 CNGA4Q8IV77 575 aa15.08■□□□□ 0.01
GPC1-209ENST00000495100 IFT81Q8WYA0 676 aa15.08■□□□□ 0.01
GPC1-209ENST00000495100 CALML4Q96GE6 196 aa15.08■□□□□ 0.01
GPC1-209ENST00000495100 CACNA1FO60840 1977 aa15.08■□□□□ 0
GPC1-209ENST00000495100 ABCC12Q96J65 1359 aa15.08■□□□□ 0
GPC1-209ENST00000495100 TTC26A0AVF1 554 aa15.08■□□□□ 0
GPC1-209ENST00000495100 CCDC66A2RUB6 948 aa15.08■□□□□ 0
GPC1-209ENST00000495100 ERVV-1B6SEH8 477 aa15.08■□□□□ 0
GPC1-209ENST00000495100 TRAF5O00463 557 aa15.08■□□□□ 0
GPC1-209ENST00000495100 TMC4Q7Z404 712 aa15.08■□□□□ 0
GPC1-209ENST00000495100 CDHR2Q9BYE9 1310 aa15.08■□□□□ 0
GPC1-209ENST00000495100 NOP2P46087 812 aaKnown RBP15.08■□□□□ 0
GPC1-209ENST00000495100 CYP4A11Q02928 519 aa15.08■□□□□ 0
GPC1-209ENST00000495100 NKX1-1Q15270 411 aaPredicted RBP15.08■□□□□ 0
GPC1-209ENST00000495100 RRAGAQ7L523 313 aa15.08■□□□□ 0
GPC1-209ENST00000495100 CCDC148Q8NFR7 591 aa15.08■□□□□ 0
GPC1-209ENST00000495100 MED15Q96RN5 788 aa15.08■□□□□ 0
GPC1-209ENST00000495100 TXNRD1Q16881 649 aa15.07■□□□□ 0
GPC1-209ENST00000495100 LONRF2Q1L5Z9 754 aa15.07■□□□□ 0
GPC1-209ENST00000495100 DPP8Q6V1X1 898 aaPredicted RBP15.07■□□□□ 0
GPC1-209ENST00000495100 KIAA0825Q8IV33 1275 aa15.07■□□□□ 0
GPC1-209ENST00000495100 TBCKQ8TEA7 893 aa15.07■□□□□ 0
GPC1-209ENST00000495100 CTAGE1Q96RT6 745 aa15.07■□□□□ 0
GPC1-209ENST00000495100 NAPGQ99747 312 aaPredicted RBP15.07■□□□□ 0
GPC1-209ENST00000495100 PLA2G12BQ9BX93 195 aa15.07■□□□□ 0
GPC1-209ENST00000495100 RBM28Q9NW13 759 aaKnown RBP15.07■□□□□ 0
GPC1-209ENST00000495100 EHD2Q9NZN4 543 aa15.07■□□□□ 0
GPC1-209ENST00000495100 TMCO5BA8MYB1 307 aa15.07■□□□□ 0
GPC1-209ENST00000495100 MEIS1O00470 390 aa15.07■□□□□ 0
GPC1-209ENST00000495100 ERLIN1O75477 346 aa15.07■□□□□ 0
GPC1-209ENST00000495100 SNX29Q8TEQ0 813 aa15.07■□□□□ 0
GPC1-209ENST00000495100 ADGRG1Q9Y653 693 aa15.07■□□□□ 0
GPC1-209ENST00000495100 USP17L5A8MUK1 530 aa15.06■□□□□ 0
GPC1-209ENST00000495100 ZNF76P36508 570 aa15.06■□□□□ 0
GPC1-209ENST00000495100 UBE4AQ14139 1066 aa15.06■□□□□ 0
GPC1-209ENST00000495100 TRAPPC3LQ5T215 181 aa15.06■□□□□ 0
GPC1-209ENST00000495100 TRIM65Q6PJ69 517 aa15.06■□□□□ 0
GPC1-209ENST00000495100 LEKR1Q6ZMV7 388 aa15.06■□□□□ 0
GPC1-209ENST00000495100 FERMT2Q96AC1 680 aa15.06■□□□□ 0
GPC1-209ENST00000495100 SHISA4Q96DD7 197 aa15.06■□□□□ 0
GPC1-209ENST00000495100 ABCB6Q9NP58 842 aa15.06■□□□□ 0
GPC1-209ENST00000495100 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms