RNA–Protein interactions for RNA: ENST00000493521.5

SOX2-OT-215, SOX2 overlapping transcript, humanhuman

TSL 3 BASIC

Gene SOX2-OT, Length 1,239 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-215ENST00000493521 RIOX2Q8IUF8 465 aa12.15□□□□□ -0.46
SOX2-OT-215ENST00000493521 TDHQ8IZJ6 230 aa12.15□□□□□ -0.46
SOX2-OT-215ENST00000493521 CEP95Q96GE4 821 aa12.15□□□□□ -0.46
SOX2-OT-215ENST00000493521 GPATCH3Q96I76 525 aa12.15□□□□□ -0.46
SOX2-OT-215ENST00000493521 CCDC17Q96LX7 622 aa12.15□□□□□ -0.46
SOX2-OT-215ENST00000493521 UBE2OQ9C0C9 1292 aaKnown RBP12.15□□□□□ -0.46
SOX2-OT-215ENST00000493521 KANSL2Q9H9L4 492 aa12.15□□□□□ -0.46
SOX2-OT-215ENST00000493521 ATP11BQ9Y2G3 1177 aa12.15□□□□□ -0.46
SOX2-OT-215ENST00000493521 CDH23Q9H251 3354 aa12.14□□□□□ -0.47
SOX2-OT-215ENST00000493521 TRIM43BA6NCK2 446 aa12.14□□□□□ -0.47
SOX2-OT-215ENST00000493521 MYADML2A6NDP7 307 aa12.14□□□□□ -0.47
SOX2-OT-215ENST00000493521 F5H6K3 240 aa12.14□□□□□ -0.47
SOX2-OT-215ENST00000493521 DNM1LO00429 736 aa12.14□□□□□ -0.47
SOX2-OT-215ENST00000493521 SEPT4O43236 478 aa12.14□□□□□ -0.47
SOX2-OT-215ENST00000493521 NMT2O60551 498 aa12.14□□□□□ -0.47
SOX2-OT-215ENST00000493521 PGK1P00558 417 aa12.14□□□□□ -0.47
SOX2-OT-215ENST00000493521 ZNF865P0CJ78 1059 aaPredicted RBP12.14□□□□□ -0.47
SOX2-OT-215ENST00000493521 ADCYAP1R1P41586 468 aa12.14□□□□□ -0.47
SOX2-OT-215ENST00000493521 SNAP25P60880 206 aa12.14□□□□□ -0.47
SOX2-OT-215ENST00000493521 KLRC3Q07444 240 aa12.14□□□□□ -0.47
SOX2-OT-215ENST00000493521 LRRC41Q15345 812 aa12.14□□□□□ -0.47
SOX2-OT-215ENST00000493521 TRIM60Q495X7 471 aa12.14□□□□□ -0.47
SOX2-OT-215ENST00000493521 C9orf50Q5SZB4 431 aa12.14□□□□□ -0.47
SOX2-OT-215ENST00000493521 VPS53Q5VIR6 699 aa12.14□□□□□ -0.47
SOX2-OT-215ENST00000493521 SLC39A5Q6ZMH5 540 aa12.14□□□□□ -0.47
SOX2-OT-215ENST00000493521 IFNL3Q8IZI9 196 aa12.14□□□□□ -0.47
SOX2-OT-215ENST00000493521 TRIM43Q96BQ3 446 aaPredicted RBP12.14□□□□□ -0.47
SOX2-OT-215ENST00000493521 MMP19Q99542 508 aa12.14□□□□□ -0.47
SOX2-OT-215ENST00000493521 RAVER2Q9HCJ3 691 aaKnown RBP12.14□□□□□ -0.47
SOX2-OT-215ENST00000493521 ARPP21Q9UBL0 812 aaPredicted RBP12.14□□□□□ -0.47
SOX2-OT-215ENST00000493521 CLIP2Q9UDT6 1046 aa12.14□□□□□ -0.47
SOX2-OT-215ENST00000493521 MCM3APO60318 1980 aa12.14□□□□□ -0.47
SOX2-OT-215ENST00000493521 PRUNE2Q8WUY3 3088 aa12.13□□□□□ -0.47
SOX2-OT-215ENST00000493521 A0A1W2PPC1 479 aa12.13□□□□□ -0.47
SOX2-OT-215ENST00000493521 TRIM6-TRIM34B2RNG4 842 aa12.13□□□□□ -0.47
SOX2-OT-215ENST00000493521 ERC2O15083 957 aa12.13□□□□□ -0.47
SOX2-OT-215ENST00000493521 STRNO43815 780 aa12.13□□□□□ -0.47
SOX2-OT-215ENST00000493521 SNAI1O95863 264 aaPredicted RBP12.13□□□□□ -0.47
SOX2-OT-215ENST00000493521 STAT3P40763 770 aa12.13□□□□□ -0.47
SOX2-OT-215ENST00000493521 EPHB4P54760 987 aa12.13□□□□□ -0.47
SOX2-OT-215ENST00000493521 CTDSPL2Q05D32 466 aa12.13□□□□□ -0.47
SOX2-OT-215ENST00000493521 CPXCR1Q8N123 301 aa12.13□□□□□ -0.47
SOX2-OT-215ENST00000493521 DEFB123Q8N688 67 aa12.13□□□□□ -0.47
SOX2-OT-215ENST00000493521 MROH8Q9H579 483 aa12.13□□□□□ -0.47
SOX2-OT-215ENST00000493521 APPP05067 770 aa12.12□□□□□ -0.47
SOX2-OT-215ENST00000493521 FCER1AP12319 257 aa12.12□□□□□ -0.47
SOX2-OT-215ENST00000493521 CAPN2P17655 700 aa12.12□□□□□ -0.47
SOX2-OT-215ENST00000493521 TDO2P48775 406 aa12.12□□□□□ -0.47
SOX2-OT-215ENST00000493521 MFAP1P55081 439 aaKnown RBP12.12□□□□□ -0.47
SOX2-OT-215ENST00000493521 LRIT3Q3SXY7 679 aa12.12□□□□□ -0.47
SOX2-OT-215ENST00000493521 ZMYM1Q5SVZ6 1142 aa12.12□□□□□ -0.47
SOX2-OT-215ENST00000493521 TMEM63BQ5T3F8 832 aa12.12□□□□□ -0.47
SOX2-OT-215ENST00000493521 SNRNP48Q6IEG0 339 aaKnown RBP12.12□□□□□ -0.47
SOX2-OT-215ENST00000493521 ZSCAN25Q6NSZ9 544 aa12.12□□□□□ -0.47
SOX2-OT-215ENST00000493521 MB21D1Q8N884 522 aa12.12□□□□□ -0.47
SOX2-OT-215ENST00000493521 RILPL2Q969X0 211 aa12.12□□□□□ -0.47
SOX2-OT-215ENST00000493521 FAM161BQ96MY7 647 aa12.12□□□□□ -0.47
SOX2-OT-215ENST00000493521 PURBQ96QR8 312 aaKnown RBP12.12□□□□□ -0.47
SOX2-OT-215ENST00000493521 TINF2Q9BSI4 451 aa12.12□□□□□ -0.47
SOX2-OT-215ENST00000493521 MKNK2Q9HBH9 465 aa12.12□□□□□ -0.47
SOX2-OT-215ENST00000493521 GOPCQ9HD26 462 aa12.12□□□□□ -0.47
SOX2-OT-215ENST00000493521 PDLIM7Q9NR12 457 aa12.12□□□□□ -0.47
SOX2-OT-215ENST00000493521 NYAP2Q9P242 653 aa12.12□□□□□ -0.47
SOX2-OT-215ENST00000493521 LCTP09848 1927 aa12.11□□□□□ -0.47
SOX2-OT-215ENST00000493521 PATL2C9JE40 543 aaKnown RBP12.11□□□□□ -0.47
SOX2-OT-215ENST00000493521 SHHQ15465 462 aa12.11□□□□□ -0.47
SOX2-OT-215ENST00000493521 ABRAQ8N0Z2 381 aa12.11□□□□□ -0.47
SOX2-OT-215ENST00000493521 BADQ92934 168 aa12.11□□□□□ -0.47
SOX2-OT-215ENST00000493521 KIFC2Q96AC6 838 aa12.11□□□□□ -0.47
SOX2-OT-215ENST00000493521 SLF1Q9BQI6 1058 aa12.11□□□□□ -0.47
SOX2-OT-215ENST00000493521 SH2D4AQ9H788 454 aa12.11□□□□□ -0.47
SOX2-OT-215ENST00000493521 PRDM5Q9NQX1 630 aaPredicted RBP12.11□□□□□ -0.47
SOX2-OT-215ENST00000493521 IL17RBQ9NRM6 502 aa12.11□□□□□ -0.47
SOX2-OT-215ENST00000493521 MTMR10Q9NXD2 777 aa12.11□□□□□ -0.47
SOX2-OT-215ENST00000493521 MTMR4Q9NYA4 1195 aa12.11□□□□□ -0.47
SOX2-OT-215ENST00000493521 ASTN1O14525 1302 aa12.11□□□□□ -0.47
SOX2-OT-215ENST00000493521 ZNF536O15090 1300 aa12.11□□□□□ -0.47
SOX2-OT-215ENST00000493521 DNAJC25-GNG10A0A024R161 153 aa12.1□□□□□ -0.47
SOX2-OT-215ENST00000493521 ADAMTS4O75173 837 aa12.1□□□□□ -0.47
SOX2-OT-215ENST00000493521 SLC25A27O95847 323 aa12.1□□□□□ -0.47
SOX2-OT-215ENST00000493521 CNTN2Q02246 1040 aa12.1□□□□□ -0.47
SOX2-OT-215ENST00000493521 PPARAQ07869 468 aa12.1□□□□□ -0.47
SOX2-OT-215ENST00000493521 SNX17Q15036 470 aa12.1□□□□□ -0.47
SOX2-OT-215ENST00000493521 GIMAP6Q6P9H5 292 aa12.1□□□□□ -0.47
SOX2-OT-215ENST00000493521 CASC1Q6TDU7 716 aa12.1□□□□□ -0.47
SOX2-OT-215ENST00000493521 AMOTL1Q8IY63 956 aa12.1□□□□□ -0.47
SOX2-OT-215ENST00000493521 FAM227BQ96M60 508 aa12.1□□□□□ -0.47
SOX2-OT-215ENST00000493521 GUCD1Q96NT3 240 aa12.1□□□□□ -0.47
SOX2-OT-215ENST00000493521 FSD1Q9BTV5 496 aa12.1□□□□□ -0.47
SOX2-OT-215ENST00000493521 UPF2Q9HAU5 1272 aaKnown RBP12.1□□□□□ -0.47
SOX2-OT-215ENST00000493521 HOMER2Q9NSB8 354 aa12.1□□□□□ -0.47
SOX2-OT-215ENST00000493521 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.1□□□□□ -0.47
SOX2-OT-215ENST00000493521 LRRC37A2A6NM11 1700 aa12.09□□□□□ -0.47
SOX2-OT-215ENST00000493521 A0A0D9SFI3 127 aa12.09□□□□□ -0.47
SOX2-OT-215ENST00000493521 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.09□□□□□ -0.47
SOX2-OT-215ENST00000493521 A0A1W2PQ45 241 aaPredicted RBP12.09□□□□□ -0.47
SOX2-OT-215ENST00000493521 A0A1W2PQY0 241 aa12.09□□□□□ -0.47
SOX2-OT-215ENST00000493521 MSCO60682 206 aa12.09□□□□□ -0.47
SOX2-OT-215ENST00000493521 TFAP4Q01664 338 aa12.09□□□□□ -0.47
SOX2-OT-215ENST00000493521 TLE2Q04725 743 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms