RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 CTSKP43235 329 aa7.62□□□□□ -1.19
SMARCC1-207ENST00000485833 ANKRD39Q53RE8 183 aa7.62□□□□□ -1.19
SMARCC1-207ENST00000485833 AXDND1Q5T1B0 1012 aaPredicted RBP7.62□□□□□ -1.19
SMARCC1-207ENST00000485833 ZNF648Q5T619 568 aaPredicted RBP7.62□□□□□ -1.19
SMARCC1-207ENST00000485833 DCAF15Q66K64 600 aa7.62□□□□□ -1.19
SMARCC1-207ENST00000485833 SHDQ96IW2 340 aa7.62□□□□□ -1.19
SMARCC1-207ENST00000485833 C19orf44Q9H6X5 657 aa7.62□□□□□ -1.19
SMARCC1-207ENST00000485833 ZMYM5Q9UJ78 669 aa7.62□□□□□ -1.19
SMARCC1-207ENST00000485833 LTBP3Q9NS15 1303 aa7.61□□□□□ -1.19
SMARCC1-207ENST00000485833 BMP8BP34820 402 aa7.61□□□□□ -1.19
SMARCC1-207ENST00000485833 TIGD5Q53EQ6 642 aa7.61□□□□□ -1.19
SMARCC1-207ENST00000485833 CPLX3Q8WVH0 158 aa7.61□□□□□ -1.19
SMARCC1-207ENST00000485833 MAP6Q96JE9 813 aa7.61□□□□□ -1.19
SMARCC1-207ENST00000485833 DSCC1Q9BVC3 393 aa7.61□□□□□ -1.19
SMARCC1-207ENST00000485833 RNF32Q9H0A6 362 aa7.61□□□□□ -1.19
SMARCC1-207ENST00000485833 FAM86C1Q9NVL1 165 aa7.61□□□□□ -1.19
SMARCC1-207ENST00000485833 STRIP2Q9ULQ0 834 aa7.61□□□□□ -1.19
SMARCC1-207ENST00000485833 A0A1W2PQH9 124 aa7.6□□□□□ -1.19
SMARCC1-207ENST00000485833 ZNF205O95201 554 aa7.6□□□□□ -1.19
SMARCC1-207ENST00000485833 TP53P04637 393 aaPredicted RBP7.6□□□□□ -1.19
SMARCC1-207ENST00000485833 C8AP07357 584 aa7.6□□□□□ -1.19
SMARCC1-207ENST00000485833 YBX3P16989 372 aaKnown RBP eCLIP7.6□□□□□ -1.191e-11■■□□□ 12.3
SMARCC1-207ENST00000485833 ENDOUP21128 410 aaKnown RBP7.6□□□□□ -1.19
SMARCC1-207ENST00000485833 MESP2Q0VG99 397 aa7.6□□□□□ -1.19
SMARCC1-207ENST00000485833 CRTC3Q6UUV7 619 aa7.6□□□□□ -1.19
SMARCC1-207ENST00000485833 PRR23BQ6ZRT6 265 aa7.6□□□□□ -1.19
SMARCC1-207ENST00000485833 FCRL2Q96LA5 508 aaPredicted RBP7.6□□□□□ -1.19
SMARCC1-207ENST00000485833 PHAXQ9H814 394 aaKnown RBP7.6□□□□□ -1.19
SMARCC1-207ENST00000485833 GP6Q9HCN6 339 aa7.6□□□□□ -1.19
SMARCC1-207ENST00000485833 USP2O75604 605 aaPredicted RBP7.59□□□□□ -1.19
SMARCC1-207ENST00000485833 GSNP06396 782 aa7.59□□□□□ -1.19
SMARCC1-207ENST00000485833 CD247P20963 164 aa7.59□□□□□ -1.19
SMARCC1-207ENST00000485833 KIR2DL1P43626 348 aaPredicted RBP7.59□□□□□ -1.19
SMARCC1-207ENST00000485833 KIR2DL2P43627 348 aaPredicted RBP7.59□□□□□ -1.19
SMARCC1-207ENST00000485833 RBM25P49756 843 aaKnown RBP7.59□□□□□ -1.19
SMARCC1-207ENST00000485833 FAM84AQ96KN4 292 aa7.59□□□□□ -1.19
SMARCC1-207ENST00000485833 NSUN3Q9H649 340 aaKnown RBP7.59□□□□□ -1.19
SMARCC1-207ENST00000485833 CAPN10Q9HC96 672 aa7.59□□□□□ -1.19
SMARCC1-207ENST00000485833 CWC22Q9HCG8 908 aaKnown RBP7.59□□□□□ -1.19
SMARCC1-207ENST00000485833 GPR160Q9UJ42 338 aa7.59□□□□□ -1.19
SMARCC1-207ENST00000485833 CUX2O14529 1486 aa7.59□□□□□ -1.19
SMARCC1-207ENST00000485833 ITGA4P13612 1032 aa7.58□□□□□ -1.2
SMARCC1-207ENST00000485833 VAV1P15498 845 aa7.58□□□□□ -1.2
SMARCC1-207ENST00000485833 ATF4P18848 351 aaPredicted RBP7.58□□□□□ -1.2
SMARCC1-207ENST00000485833 ZNF445P59923 1031 aa7.58□□□□□ -1.2
SMARCC1-207ENST00000485833 SNX17Q15036 470 aa7.58□□□□□ -1.2
SMARCC1-207ENST00000485833 NOL9Q5SY16 702 aaKnown RBP7.58□□□□□ -1.2
SMARCC1-207ENST00000485833 ZPBP2Q6X784 338 aa7.58□□□□□ -1.2
SMARCC1-207ENST00000485833 KSR1Q8IVT5 923 aa7.58□□□□□ -1.2
SMARCC1-207ENST00000485833 HHIPL1Q96JK4 782 aa7.58□□□□□ -1.2
SMARCC1-207ENST00000485833 DIRC2Q96SL1 478 aa7.58□□□□□ -1.2
SMARCC1-207ENST00000485833 SLC38A3Q99624 504 aa7.58□□□□□ -1.2
SMARCC1-207ENST00000485833 PODXL2Q9NZ53 605 aa7.58□□□□□ -1.2
SMARCC1-207ENST00000485833 ZNF451Q9Y4E5 1061 aa7.58□□□□□ -1.2
SMARCC1-207ENST00000485833 FHOD1Q9Y613 1164 aa7.58□□□□□ -1.2
SMARCC1-207ENST00000485833 NOTOA8MTQ0 251 aa7.57□□□□□ -1.2
SMARCC1-207ENST00000485833 CBFA2T2O43439 604 aa7.57□□□□□ -1.2
SMARCC1-207ENST00000485833 CASP7P55210 303 aa7.57□□□□□ -1.2
SMARCC1-207ENST00000485833 PPP2R5EQ16537 467 aa7.57□□□□□ -1.2
SMARCC1-207ENST00000485833 GNPTABQ3T906 1256 aa7.57□□□□□ -1.2
SMARCC1-207ENST00000485833 CWF19L1Q69YN2 538 aaKnown RBP7.57□□□□□ -1.2
SMARCC1-207ENST00000485833 CEP128Q6ZU80 1094 aa7.57□□□□□ -1.2
SMARCC1-207ENST00000485833 HAUS7Q99871 368 aa7.57□□□□□ -1.2
SMARCC1-207ENST00000485833 CDADC1Q9BWV3 514 aa7.57□□□□□ -1.2
SMARCC1-207ENST00000485833 SLC6A17Q9H1V8 727 aa7.57□□□□□ -1.2
SMARCC1-207ENST00000485833 EPB41L4BQ9H329 900 aa7.57□□□□□ -1.2
SMARCC1-207ENST00000485833 YBX2Q9Y2T7 364 aaKnown RBP7.57□□□□□ -1.2
SMARCC1-207ENST00000485833 H0Y8X5 98 aa7.56□□□□□ -1.2
SMARCC1-207ENST00000485833 NRDCO43847 1150 aa7.56□□□□□ -1.2
SMARCC1-207ENST00000485833 PSPNO60542 156 aa7.56□□□□□ -1.2
SMARCC1-207ENST00000485833 SLC7A5Q01650 507 aa7.56□□□□□ -1.2
SMARCC1-207ENST00000485833 TCEAL1Q15170 157 aa7.56□□□□□ -1.2
SMARCC1-207ENST00000485833 LCE3BQ5TA77 95 aa7.56□□□□□ -1.2
SMARCC1-207ENST00000485833 IRF2BP1Q8IU81 584 aa7.56□□□□□ -1.2
SMARCC1-207ENST00000485833 FIBCD1Q8N539 461 aa7.56□□□□□ -1.2
SMARCC1-207ENST00000485833 FAM169BQ8N8A8 192 aa7.56□□□□□ -1.2
SMARCC1-207ENST00000485833 FBXO15Q8NCQ5 510 aaPredicted RBP7.56□□□□□ -1.2
SMARCC1-207ENST00000485833 BHLHE22Q8NFJ8 381 aaPredicted RBP7.56□□□□□ -1.2
SMARCC1-207ENST00000485833 BRF1Q92994 677 aa7.56□□□□□ -1.2
SMARCC1-207ENST00000485833 SHISA4Q96DD7 197 aa7.56□□□□□ -1.2
SMARCC1-207ENST00000485833 ANAPC16Q96DE5 110 aa7.56□□□□□ -1.2
SMARCC1-207ENST00000485833 INTS4Q96HW7 963 aaKnown RBP7.56□□□□□ -1.2
SMARCC1-207ENST00000485833 ERVK13-1Q9NX77 482 aa7.56□□□□□ -1.2
SMARCC1-207ENST00000485833 TNFRSF10DQ9UBN6 386 aa7.56□□□□□ -1.2
SMARCC1-207ENST00000485833 PCDHB10Q9UN67 800 aa7.56□□□□□ -1.2
SMARCC1-207ENST00000485833 SLC14A2Q15849 920 aa7.55□□□□□ -1.2
SMARCC1-207ENST00000485833 PKN1Q16512 942 aa7.55□□□□□ -1.2
SMARCC1-207ENST00000485833 RTP2Q5QGT7 225 aa7.55□□□□□ -1.2
SMARCC1-207ENST00000485833 NLRX1Q86UT6 975 aa7.55□□□□□ -1.2
SMARCC1-207ENST00000485833 VPS37DQ86XT2 251 aa7.55□□□□□ -1.2
SMARCC1-207ENST00000485833 KLHL6Q8WZ60 621 aa7.55□□□□□ -1.2
SMARCC1-207ENST00000485833 SLC12A9Q9BXP2 914 aa7.55□□□□□ -1.2
SMARCC1-207ENST00000485833 KLHL25Q9H0H3 589 aa7.55□□□□□ -1.2
SMARCC1-207ENST00000485833 NOL6Q9H6R4 1146 aaKnown RBP7.55□□□□□ -1.2
SMARCC1-207ENST00000485833 DCP1AQ9NPI6 582 aaPredicted RBP7.55□□□□□ -1.2
SMARCC1-207ENST00000485833 AP5S1Q9NUS5 200 aa7.55□□□□□ -1.2
SMARCC1-207ENST00000485833 WHRNQ9P202 907 aa7.55□□□□□ -1.2
SMARCC1-207ENST00000485833 GPR55Q9Y2T6 319 aaPredicted RBP7.55□□□□□ -1.2
SMARCC1-207ENST00000485833 SF3B6Q9Y3B4 125 aaKnown RBP7.55□□□□□ -1.2
SMARCC1-207ENST00000485833 A0A087WZG4 1122 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms