RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 STAT3P40763 770 aa12.66□□□□□ -0.38
ATG4B-219ENST00000479941 OAZ1P54368 228 aa12.66□□□□□ -0.38
ATG4B-219ENST00000479941 PLS1Q14651 629 aa12.66□□□□□ -0.38
ATG4B-219ENST00000479941 TMEM132BQ14DG7 1078 aa12.66□□□□□ -0.38
ATG4B-219ENST00000479941 C8orf34Q49A92 452 aa12.66□□□□□ -0.38
ATG4B-219ENST00000479941 ASPRV1Q53RT3 343 aa12.66□□□□□ -0.38
ATG4B-219ENST00000479941 RASGRP2Q7LDG7 609 aa12.66□□□□□ -0.38
ATG4B-219ENST00000479941 CATIPQ7Z7H3 387 aa12.66□□□□□ -0.38
ATG4B-219ENST00000479941 SHCBP1Q8NEM2 672 aa12.66□□□□□ -0.38
ATG4B-219ENST00000479941 REPS2Q8NFH8 660 aa12.66□□□□□ -0.38
ATG4B-219ENST00000479941 JAKMIP1Q96N16 626 aaKnown RBP12.66□□□□□ -0.38
ATG4B-219ENST00000479941 MOV10L1Q9BXT6 1211 aaKnown RBP12.66□□□□□ -0.38
ATG4B-219ENST00000479941 PORCNQ9H237 461 aa12.66□□□□□ -0.38
ATG4B-219ENST00000479941 LY9Q9HBG7 655 aa12.66□□□□□ -0.38
ATG4B-219ENST00000479941 CWC22Q9HCG8 908 aaKnown RBP12.66□□□□□ -0.38
ATG4B-219ENST00000479941 SRRDQ9UH36 339 aa12.66□□□□□ -0.38
ATG4B-219ENST00000479941 ZNF214Q9UL59 606 aaPredicted RBP12.66□□□□□ -0.38
ATG4B-219ENST00000479941 PRR12Q9ULL5 1215 aa12.66□□□□□ -0.38
ATG4B-219ENST00000479941 PTPN22Q9Y2R2 807 aa12.66□□□□□ -0.38
ATG4B-219ENST00000479941 FRMPD2Q68DX3 1309 aaPredicted RBP12.65□□□□□ -0.38
ATG4B-219ENST00000479941 PARP14Q460N5 1801 aa12.65□□□□□ -0.38
ATG4B-219ENST00000479941 CENPFP49454 3210 aa12.65□□□□□ -0.38
ATG4B-219ENST00000479941 CCDC69A6NI79 296 aa12.65□□□□□ -0.38
ATG4B-219ENST00000479941 SLC25A27O95847 323 aa12.65□□□□□ -0.38
ATG4B-219ENST00000479941 COPB2P35606 906 aa12.65□□□□□ -0.38
ATG4B-219ENST00000479941 TROAPQ12815 778 aa12.65□□□□□ -0.38
ATG4B-219ENST00000479941 COL9A3Q14050 684 aaPredicted RBP12.65□□□□□ -0.38
ATG4B-219ENST00000479941 TTBK2Q6IQ55 1244 aa12.65□□□□□ -0.38
ATG4B-219ENST00000479941 FBXO46Q6PJ61 603 aaPredicted RBP12.65□□□□□ -0.38
ATG4B-219ENST00000479941 BLOC1S2Q6QNY1 142 aa12.65□□□□□ -0.38
ATG4B-219ENST00000479941 NFXL1Q6ZNB6 911 aa12.65□□□□□ -0.38
ATG4B-219ENST00000479941 GPR142Q7Z601 462 aa12.65□□□□□ -0.38
ATG4B-219ENST00000479941 PLEKHH3Q7Z736 793 aa12.65□□□□□ -0.38
ATG4B-219ENST00000479941 TEX13BQ9BXU2 312 aa12.65□□□□□ -0.38
ATG4B-219ENST00000479941 MCOLN1Q9GZU1 580 aa12.65□□□□□ -0.38
ATG4B-219ENST00000479941 MROH8Q9H579 483 aa12.65□□□□□ -0.38
ATG4B-219ENST00000479941 SENP2Q9HC62 589 aa12.65□□□□□ -0.38
ATG4B-219ENST00000479941 GPCPD1Q9NPB8 672 aa12.65□□□□□ -0.38
ATG4B-219ENST00000479941 DDAH1O94760 285 aa12.64□□□□□ -0.39
ATG4B-219ENST00000479941 SEC24BO95487 1268 aa12.64□□□□□ -0.39
ATG4B-219ENST00000479941 GOLGA8HP0CJ92 632 aa12.64□□□□□ -0.39
ATG4B-219ENST00000479941 ERCC3P19447 782 aa12.64□□□□□ -0.39
ATG4B-219ENST00000479941 SLC16A2P36021 539 aa12.64□□□□□ -0.39
ATG4B-219ENST00000479941 ANAPC15P60006 121 aa12.64□□□□□ -0.39
ATG4B-219ENST00000479941 SYDE2Q5VT97 1194 aa12.64□□□□□ -0.39
ATG4B-219ENST00000479941 SGMS1Q86VZ5 419 aa12.64□□□□□ -0.39
ATG4B-219ENST00000479941 RIOX2Q8IUF8 465 aa12.64□□□□□ -0.39
ATG4B-219ENST00000479941 ZNF654Q8IZM8 581 aa12.64□□□□□ -0.39
ATG4B-219ENST00000479941 MAP3K14Q99558 947 aa12.64□□□□□ -0.39
ATG4B-219ENST00000479941 LRRC2Q9BYS8 371 aa12.64□□□□□ -0.39
ATG4B-219ENST00000479941 TM6SF1Q9BZW5 370 aa12.64□□□□□ -0.39
ATG4B-219ENST00000479941 IVNS1ABPQ9Y6Y0 642 aa12.64□□□□□ -0.39
ATG4B-219ENST00000479941 PALM3A6NDB9 673 aaPredicted RBP12.63□□□□□ -0.39
ATG4B-219ENST00000479941 STRNO43815 780 aa12.63□□□□□ -0.39
ATG4B-219ENST00000479941 CALM1P0DP23 149 aa12.63□□□□□ -0.39
ATG4B-219ENST00000479941 CALM2P0DP24 149 aa12.63□□□□□ -0.39
ATG4B-219ENST00000479941 CALM3P0DP25 149 aa12.63□□□□□ -0.39
ATG4B-219ENST00000479941 CASTP20810 708 aaKnown RBP12.63□□□□□ -0.39
ATG4B-219ENST00000479941 RPS6KB1P23443 525 aa12.63□□□□□ -0.39
ATG4B-219ENST00000479941 FGD1P98174 961 aa12.63□□□□□ -0.39
ATG4B-219ENST00000479941 PRKCZQ05513 592 aa12.63□□□□□ -0.39
ATG4B-219ENST00000479941 GRM4Q14833 912 aa12.63□□□□□ -0.39
ATG4B-219ENST00000479941 WDR78Q5VTH9 848 aa12.63□□□□□ -0.39
ATG4B-219ENST00000479941 SNRNP48Q6IEG0 339 aaKnown RBP12.63□□□□□ -0.39
ATG4B-219ENST00000479941 SYNE3Q6ZMZ3 975 aa12.63□□□□□ -0.39
ATG4B-219ENST00000479941 NCAPG2Q86XI2 1143 aa12.63□□□□□ -0.39
ATG4B-219ENST00000479941 TNS4Q8IZW8 715 aa12.63□□□□□ -0.39
ATG4B-219ENST00000479941 CPXCR1Q8N123 301 aa12.63□□□□□ -0.39
ATG4B-219ENST00000479941 FBXL16Q8N461 479 aa12.63□□□□□ -0.39
ATG4B-219ENST00000479941 RAET1EQ8TD07 263 aa12.63□□□□□ -0.39
ATG4B-219ENST00000479941 SOCS4Q8WXH5 440 aa12.63□□□□□ -0.39
ATG4B-219ENST00000479941 NUDT12Q9BQG2 462 aa12.63□□□□□ -0.39
ATG4B-219ENST00000479941 RANBP17Q9H2T7 1088 aaKnown RBP12.63□□□□□ -0.39
ATG4B-219ENST00000479941 RAVER2Q9HCJ3 691 aaKnown RBP12.63□□□□□ -0.39
ATG4B-219ENST00000479941 ZSWIM6Q9HCJ5 1215 aa12.63□□□□□ -0.39
ATG4B-219ENST00000479941 GPHNQ9NQX3 736 aaPredicted RBP12.63□□□□□ -0.39
ATG4B-219ENST00000479941 MAD2L2Q9UI95 211 aa12.63□□□□□ -0.39
ATG4B-219ENST00000479941 PNMA2Q9UL42 364 aa12.63□□□□□ -0.39
ATG4B-219ENST00000479941 SLC12A7Q9Y666 1083 aa12.63□□□□□ -0.39
ATG4B-219ENST00000479941 MGAMO43451 1857 aa12.63□□□□□ -0.39
ATG4B-219ENST00000479941 SLC15A5A6NIM6 579 aa12.62□□□□□ -0.39
ATG4B-219ENST00000479941 KLRF2D3W0D1 207 aa12.62□□□□□ -0.39
ATG4B-219ENST00000479941 CPA1P15085 419 aa12.62□□□□□ -0.39
ATG4B-219ENST00000479941 PTPREP23469 700 aa12.62□□□□□ -0.39
ATG4B-219ENST00000479941 KIF5BP33176 963 aa12.62□□□□□ -0.39
ATG4B-219ENST00000479941 FLT3LGP49771 235 aa12.62□□□□□ -0.39
ATG4B-219ENST00000479941 IRF5Q13568 498 aa12.62□□□□□ -0.39
ATG4B-219ENST00000479941 TKFCQ3LXA3 575 aa12.62□□□□□ -0.39
ATG4B-219ENST00000479941 Q6ZUG5 572 aa12.62□□□□□ -0.39
ATG4B-219ENST00000479941 RUFY3Q7L099 469 aa12.62□□□□□ -0.39
ATG4B-219ENST00000479941 ABRAQ8N0Z2 381 aa12.62□□□□□ -0.39
ATG4B-219ENST00000479941 CTCFLQ8NI51 663 aaPredicted RBP12.62□□□□□ -0.39
ATG4B-219ENST00000479941 NUP133Q8WUM0 1156 aa12.62□□□□□ -0.39
ATG4B-219ENST00000479941 TCEANC2Q96MN5 208 aa12.62□□□□□ -0.39
ATG4B-219ENST00000479941 UBA5Q9GZZ9 404 aa12.62□□□□□ -0.39
ATG4B-219ENST00000479941 FBXO40Q9UH90 709 aa12.62□□□□□ -0.39
ATG4B-219ENST00000479941 GJD2Q9UKL4 321 aa12.62□□□□□ -0.39
ATG4B-219ENST00000479941 GABRQQ9UN88 632 aa12.62□□□□□ -0.39
ATG4B-219ENST00000479941 CYP46A1Q9Y6A2 500 aa12.62□□□□□ -0.39
ATG4B-219ENST00000479941 PTCH2Q9Y6C5 1203 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms