RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 IBSPP21815 317 aaPredicted RBP6.84□□□□□ -1.31
ECHDC1-215ENST00000475319 CES1P23141 567 aa6.84□□□□□ -1.31
ECHDC1-215ENST00000475319 TPP2P29144 1249 aaPredicted RBP6.84□□□□□ -1.31
ECHDC1-215ENST00000475319 FCGRTP55899 365 aa6.84□□□□□ -1.31
ECHDC1-215ENST00000475319 DDR1Q08345 913 aa6.84□□□□□ -1.31
ECHDC1-215ENST00000475319 IQCB1Q15051 598 aa6.84□□□□□ -1.31
ECHDC1-215ENST00000475319 MAP3K11Q16584 847 aa6.84□□□□□ -1.31
ECHDC1-215ENST00000475319 KIAA0319Q5VV43 1072 aa6.84□□□□□ -1.31
ECHDC1-215ENST00000475319 FBXL19Q6PCT2 694 aa6.84□□□□□ -1.31
ECHDC1-215ENST00000475319 SPATA21Q7Z572 469 aa6.84□□□□□ -1.31
ECHDC1-215ENST00000475319 TADA2BQ86TJ2 420 aa6.84□□□□□ -1.31
ECHDC1-215ENST00000475319 HSCBQ8IWL3 235 aa6.84□□□□□ -1.31
ECHDC1-215ENST00000475319 ZIC5Q96T25 663 aa6.84□□□□□ -1.31
ECHDC1-215ENST00000475319 SNTG2Q9NY99 539 aa6.84□□□□□ -1.31
ECHDC1-215ENST00000475319 MCM8Q9UJA3 840 aa6.84□□□□□ -1.31
ECHDC1-215ENST00000475319 FANCAO15360 1455 aa6.84□□□□□ -1.31
ECHDC1-215ENST00000475319 ABCA9Q8IUA7 1624 aa6.84□□□□□ -1.32
ECHDC1-215ENST00000475319 RAPGEF6Q8TEU7 1601 aa6.84□□□□□ -1.32
ECHDC1-215ENST00000475319 A0A1W2PP55 124 aa6.83□□□□□ -1.32
ECHDC1-215ENST00000475319 SPATA31C2B4DYI2 1134 aa6.83□□□□□ -1.32
ECHDC1-215ENST00000475319 GOLGA6L19H0YKK7 550 aa6.83□□□□□ -1.32
ECHDC1-215ENST00000475319 SASH1O94885 1247 aa6.83□□□□□ -1.32
ECHDC1-215ENST00000475319 ZNF24P17028 368 aa6.83□□□□□ -1.32
ECHDC1-215ENST00000475319 YY1P25490 414 aa6.83□□□□□ -1.32
ECHDC1-215ENST00000475319 SOX9P48436 509 aa6.83□□□□□ -1.32
ECHDC1-215ENST00000475319 RAB27AP51159 221 aa6.83□□□□□ -1.32
ECHDC1-215ENST00000475319 FAM160A1Q05DH4 1040 aa6.83□□□□□ -1.32
ECHDC1-215ENST00000475319 RAB33AQ14088 237 aa6.83□□□□□ -1.32
ECHDC1-215ENST00000475319 ARSJQ5FYB0 599 aaPredicted RBP6.83□□□□□ -1.32
ECHDC1-215ENST00000475319 KCNV1Q6PIU1 500 aa6.83□□□□□ -1.32
ECHDC1-215ENST00000475319 NEK11Q8NG66 645 aa6.83□□□□□ -1.32
ECHDC1-215ENST00000475319 PMEPA1Q969W9 287 aa6.83□□□□□ -1.32
ECHDC1-215ENST00000475319 RBSNQ9H1K0 784 aa6.83□□□□□ -1.32
ECHDC1-215ENST00000475319 KANSL3Q9P2N6 904 aa6.83□□□□□ -1.32
ECHDC1-215ENST00000475319 PUF60Q9UHX1 559 aaKnown RBP6.83□□□□□ -1.32
ECHDC1-215ENST00000475319 STRIP2Q9ULQ0 834 aa6.83□□□□□ -1.32
ECHDC1-215ENST00000475319 BARX2Q9UMQ3 279 aaPredicted RBP6.83□□□□□ -1.32
ECHDC1-215ENST00000475319 ATP8A1Q9Y2Q0 1164 aa6.83□□□□□ -1.32
ECHDC1-215ENST00000475319 PTPRCP08575 1304 aa6.83□□□□□ -1.32
ECHDC1-215ENST00000475319 EIF3AQ14152 1382 aaKnown RBP6.83□□□□□ -1.32
ECHDC1-215ENST00000475319 PLEKHH1Q9ULM0 1364 aa6.83□□□□□ -1.32
ECHDC1-215ENST00000475319 PTPRMP28827 1452 aa6.83□□□□□ -1.32
ECHDC1-215ENST00000475319 KIF21BO75037 1637 aa6.83□□□□□ -1.32
ECHDC1-215ENST00000475319 BICDL2A1A5D9 508 aa6.82□□□□□ -1.32
ECHDC1-215ENST00000475319 FAM221BA6H8Z2 402 aa6.82□□□□□ -1.32
ECHDC1-215ENST00000475319 PDLIM1O00151 329 aa6.82□□□□□ -1.32
ECHDC1-215ENST00000475319 RTN2O75298 545 aa6.82□□□□□ -1.32
ECHDC1-215ENST00000475319 KRT38O76015 456 aa6.82□□□□□ -1.32
ECHDC1-215ENST00000475319 CYP2E1P05181 493 aaPredicted RBP6.82□□□□□ -1.32
ECHDC1-215ENST00000475319 EPB42P16452 691 aa6.82□□□□□ -1.32
ECHDC1-215ENST00000475319 XBP1P17861 261 aa6.82□□□□□ -1.32
ECHDC1-215ENST00000475319 RBM6P78332 1123 aaKnown RBP6.82□□□□□ -1.32
ECHDC1-215ENST00000475319 TYRO3Q06418 890 aa6.82□□□□□ -1.32
ECHDC1-215ENST00000475319 POU4F2Q12837 409 aa6.82□□□□□ -1.32
ECHDC1-215ENST00000475319 INF2Q27J81 1249 aa6.82□□□□□ -1.32
ECHDC1-215ENST00000475319 EFCAB2Q5VUJ9 269 aa6.82□□□□□ -1.32
ECHDC1-215ENST00000475319 PEAR1Q5VY43 1037 aaPredicted RBP6.82□□□□□ -1.32
ECHDC1-215ENST00000475319 LRSAM1Q6UWE0 723 aa6.82□□□□□ -1.32
ECHDC1-215ENST00000475319 WDR63Q8IWG1 891 aa6.82□□□□□ -1.32
ECHDC1-215ENST00000475319 SMC5Q8IY18 1101 aa6.82□□□□□ -1.32
ECHDC1-215ENST00000475319 AMOTL1Q8IY63 956 aa6.82□□□□□ -1.32
ECHDC1-215ENST00000475319 CCDC112Q8NEF3 446 aa6.82□□□□□ -1.32
ECHDC1-215ENST00000475319 ARID1BQ8NFD5 2236 aaPredicted RBP6.82□□□□□ -1.32
ECHDC1-215ENST00000475319 CTCFLQ8NI51 663 aaPredicted RBP6.82□□□□□ -1.32
ECHDC1-215ENST00000475319 ANAPC16Q96DE5 110 aa6.82□□□□□ -1.32
ECHDC1-215ENST00000475319 RHOVQ96L33 236 aa6.82□□□□□ -1.32
ECHDC1-215ENST00000475319 DEPDC7Q96QD5 511 aa6.82□□□□□ -1.32
ECHDC1-215ENST00000475319 NT5C1AQ9BXI3 368 aa6.82□□□□□ -1.32
ECHDC1-215ENST00000475319 UBP1Q9NZI7 540 aa6.82□□□□□ -1.32
ECHDC1-215ENST00000475319 LMCD1Q9NZU5 365 aa6.82□□□□□ -1.32
ECHDC1-215ENST00000475319 SPATA7Q9P0W8 599 aa6.82□□□□□ -1.32
ECHDC1-215ENST00000475319 MYO6Q9UM54 1294 aa6.82□□□□□ -1.32
ECHDC1-215ENST00000475319 TLR6Q9Y2C9 796 aa6.82□□□□□ -1.32
ECHDC1-215ENST00000475319 TMEM98Q9Y2Y6 226 aa6.82□□□□□ -1.32
ECHDC1-215ENST00000475319 COMMD10Q9Y6G5 202 aa6.82□□□□□ -1.32
ECHDC1-215ENST00000475319 CLIP1P30622 1438 aa6.81□□□□□ -1.32
ECHDC1-215ENST00000475319 GOLGA6L10A6NI86 522 aa6.81□□□□□ -1.32
ECHDC1-215ENST00000475319 CCDC85CA6NKD9 419 aa6.81□□□□□ -1.32
ECHDC1-215ENST00000475319 CREB3O43889 395 aa6.81□□□□□ -1.32
ECHDC1-215ENST00000475319 OPA1O60313 960 aa6.81□□□□□ -1.32
ECHDC1-215ENST00000475319 RTN3O95197 1032 aaPredicted RBP6.81□□□□□ -1.32
ECHDC1-215ENST00000475319 GCKP35557 465 aa6.81□□□□□ -1.32
ECHDC1-215ENST00000475319 CCNHP51946 323 aaPredicted RBP6.81□□□□□ -1.32
ECHDC1-215ENST00000475319 KRT72Q14CN4 511 aa6.81□□□□□ -1.32
ECHDC1-215ENST00000475319 ZSCAN23Q3MJ62 389 aa6.81□□□□□ -1.32
ECHDC1-215ENST00000475319 TTC39BQ5VTQ0 682 aaPredicted RBP6.81□□□□□ -1.32
ECHDC1-215ENST00000475319 SYNE3Q6ZMZ3 975 aa6.81□□□□□ -1.32
ECHDC1-215ENST00000475319 MICALCLQ6ZW33 695 aa6.81□□□□□ -1.32
ECHDC1-215ENST00000475319 FAM114A1Q8IWE2 563 aa6.81□□□□□ -1.32
ECHDC1-215ENST00000475319 CPLX3Q8WVH0 158 aa6.81□□□□□ -1.32
ECHDC1-215ENST00000475319 N4BP2L2Q92802 583 aaPredicted RBP6.81□□□□□ -1.32
ECHDC1-215ENST00000475319 DTNBP1Q96EV8 351 aa6.81□□□□□ -1.32
ECHDC1-215ENST00000475319 ERO1AQ96HE7 468 aa6.81□□□□□ -1.32
ECHDC1-215ENST00000475319 FAM81BQ96LP2 452 aa6.81□□□□□ -1.32
ECHDC1-215ENST00000475319 CEP63Q96MT8 703 aa6.81□□□□□ -1.32
ECHDC1-215ENST00000475319 STK31Q9BXU1 1019 aa6.81□□□□□ -1.32
ECHDC1-215ENST00000475319 KRTAP4-11Q9BYQ6 195 aa6.81□□□□□ -1.32
ECHDC1-215ENST00000475319 IFT57Q9NWB7 429 aa6.81□□□□□ -1.32
ECHDC1-215ENST00000475319 COL4A3BPQ9Y5P4 624 aa6.81□□□□□ -1.32
ECHDC1-215ENST00000475319 EFCAB5A4FU69 1503 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms