RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 C1orf53Q5VUE5 145 aa9.52□□□□□ -0.89
CDC42BPA-210ENST00000462553 NCAPG2Q86XI2 1143 aa9.52□□□□□ -0.89
CDC42BPA-210ENST00000462553 SMC5Q8IY18 1101 aa9.52□□□□□ -0.89
CDC42BPA-210ENST00000462553 ARRDC4Q8NCT1 418 aa9.52□□□□□ -0.89
CDC42BPA-210ENST00000462553 TRIM43Q96BQ3 446 aaPredicted RBP9.52□□□□□ -0.89
CDC42BPA-210ENST00000462553 FAM161BQ96MY7 647 aa9.52□□□□□ -0.89
CDC42BPA-210ENST00000462553 LBHD1Q9BQE6 289 aaPredicted RBP9.52□□□□□ -0.89
CDC42BPA-210ENST00000462553 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.52□□□□□ -0.89
CDC42BPA-210ENST00000462553 COL25A1Q9BXS0 654 aaPredicted RBP9.52□□□□□ -0.89
CDC42BPA-210ENST00000462553 ARHGEF10LQ9HCE6 1279 aa9.52□□□□□ -0.89
CDC42BPA-210ENST00000462553 ATP8A2Q9NTI2 1148 aa9.52□□□□□ -0.89
CDC42BPA-210ENST00000462553 ECHDC1Q9NTX5 307 aa9.52□□□□□ -0.89
CDC42BPA-210ENST00000462553 ZNF214Q9UL59 606 aaPredicted RBP9.52□□□□□ -0.89
CDC42BPA-210ENST00000462553 PGK2P07205 417 aa9.51□□□□□ -0.89
CDC42BPA-210ENST00000462553 EEF2P13639 858 aaKnown RBP9.51□□□□□ -0.89
CDC42BPA-210ENST00000462553 TAL1P17542 331 aaPredicted RBP9.51□□□□□ -0.89
CDC42BPA-210ENST00000462553 ADCYAP1R1P41586 468 aa9.51□□□□□ -0.89
CDC42BPA-210ENST00000462553 PLS1Q14651 629 aa9.51□□□□□ -0.89
CDC42BPA-210ENST00000462553 RIOX2Q8IUF8 465 aa9.51□□□□□ -0.89
CDC42BPA-210ENST00000462553 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.51□□□□□ -0.89
CDC42BPA-210ENST00000462553 BADQ92934 168 aa9.51□□□□□ -0.89
CDC42BPA-210ENST00000462553 FERMT2Q96AC1 680 aa9.51□□□□□ -0.89
CDC42BPA-210ENST00000462553 LENG1Q96BZ8 264 aaPredicted RBP9.51□□□□□ -0.89
CDC42BPA-210ENST00000462553 TTYH1Q9H313 450 aaPredicted RBP9.51□□□□□ -0.89
CDC42BPA-210ENST00000462553 SH2D4AQ9H788 454 aa9.51□□□□□ -0.89
CDC42BPA-210ENST00000462553 PRDM5Q9NQX1 630 aaPredicted RBP9.51□□□□□ -0.89
CDC42BPA-210ENST00000462553 PPP1R9AQ9ULJ8 1098 aa9.51□□□□□ -0.89
CDC42BPA-210ENST00000462553 PHF24Q9UPV7 400 aa9.51□□□□□ -0.89
CDC42BPA-210ENST00000462553 TTC41PQ6P2S7 1318 aa9.51□□□□□ -0.89
CDC42BPA-210ENST00000462553 USP17L12C9JPN9 530 aa9.5□□□□□ -0.89
CDC42BPA-210ENST00000462553 USP17L21D6R901 530 aa9.5□□□□□ -0.89
CDC42BPA-210ENST00000462553 VWA5AO00534 786 aa9.5□□□□□ -0.89
CDC42BPA-210ENST00000462553 SLC25A27O95847 323 aa9.5□□□□□ -0.89
CDC42BPA-210ENST00000462553 ZNF865P0CJ78 1059 aaPredicted RBP9.5□□□□□ -0.89
CDC42BPA-210ENST00000462553 FCER1AP12319 257 aa9.5□□□□□ -0.89
CDC42BPA-210ENST00000462553 EPHB4P54760 987 aa9.5□□□□□ -0.89
CDC42BPA-210ENST00000462553 UBE3CQ15386 1083 aa9.5□□□□□ -0.89
CDC42BPA-210ENST00000462553 ZNF792Q3KQV3 632 aa9.5□□□□□ -0.89
CDC42BPA-210ENST00000462553 ZNF697Q5TEC3 545 aa9.5□□□□□ -0.89
CDC42BPA-210ENST00000462553 ANKRD45Q5TZF3 282 aa9.5□□□□□ -0.89
CDC42BPA-210ENST00000462553 CTR9Q6PD62 1173 aa9.5□□□□□ -0.89
CDC42BPA-210ENST00000462553 CCDC17Q96LX7 622 aa9.5□□□□□ -0.89
CDC42BPA-210ENST00000462553 MMP19Q99542 508 aa9.5□□□□□ -0.89
CDC42BPA-210ENST00000462553 TINF2Q9BSI4 451 aa9.5□□□□□ -0.89
CDC42BPA-210ENST00000462553 PUS7LQ9H0K6 701 aaKnown RBP9.5□□□□□ -0.89
CDC42BPA-210ENST00000462553 PRKAG2Q9UGJ0 569 aa9.5□□□□□ -0.89
CDC42BPA-210ENST00000462553 NRBP1Q9UHY1 535 aa9.5□□□□□ -0.89
CDC42BPA-210ENST00000462553 A0A1W2PQ45 241 aaPredicted RBP9.49□□□□□ -0.89
CDC42BPA-210ENST00000462553 A0A1W2PQY0 241 aa9.49□□□□□ -0.89
CDC42BPA-210ENST00000462553 ADAMTS4O75173 837 aa9.49□□□□□ -0.89
CDC42BPA-210ENST00000462553 PGK1P00558 417 aa9.49□□□□□ -0.89
CDC42BPA-210ENST00000462553 MX1P20591 662 aa9.49□□□□□ -0.89
CDC42BPA-210ENST00000462553 TLE2Q04725 743 aa9.49□□□□□ -0.89
CDC42BPA-210ENST00000462553 FAM83BQ5T0W9 1011 aa9.49□□□□□ -0.89
CDC42BPA-210ENST00000462553 KBTBD3Q8NAB2 608 aa9.49□□□□□ -0.89
CDC42BPA-210ENST00000462553 GPATCH3Q96I76 525 aa9.49□□□□□ -0.89
CDC42BPA-210ENST00000462553 CDX2Q99626 313 aaPredicted RBP9.49□□□□□ -0.89
CDC42BPA-210ENST00000462553 LNPKQ9C0E8 428 aa9.49□□□□□ -0.89
CDC42BPA-210ENST00000462553 KANSL2Q9H9L4 492 aa9.49□□□□□ -0.89
CDC42BPA-210ENST00000462553 XPNPEP3Q9NQH7 507 aa9.49□□□□□ -0.89
CDC42BPA-210ENST00000462553 SLC5A4Q9NY91 659 aa9.49□□□□□ -0.89
CDC42BPA-210ENST00000462553 DIS3Q9Y2L1 958 aaKnown RBP9.49□□□□□ -0.89
CDC42BPA-210ENST00000462553 SLC4A4Q9Y6R1 1079 aa9.49□□□□□ -0.89
CDC42BPA-210ENST00000462553 SYNRGQ9UMZ2 1314 aa9.49□□□□□ -0.89
CDC42BPA-210ENST00000462553 LAMA4Q16363 1823 aa9.49□□□□□ -0.89
CDC42BPA-210ENST00000462553 KIAA0355O15063 1070 aa9.48□□□□□ -0.89
CDC42BPA-210ENST00000462553 ADCY6O43306 1168 aa9.48□□□□□ -0.89
CDC42BPA-210ENST00000462553 CLTBP09497 229 aa9.48□□□□□ -0.89
CDC42BPA-210ENST00000462553 RARBP10826 455 aa9.48□□□□□ -0.89
CDC42BPA-210ENST00000462553 RASA1P20936 1047 aa9.48□□□□□ -0.89
CDC42BPA-210ENST00000462553 STAT3P40763 770 aa9.48□□□□□ -0.89
CDC42BPA-210ENST00000462553 PDE1AP54750 535 aa9.48□□□□□ -0.89
CDC42BPA-210ENST00000462553 SMAD3P84022 425 aaKnown RBP9.48□□□□□ -0.89
CDC42BPA-210ENST00000462553 FGD4Q96M96 766 aa9.48□□□□□ -0.89
CDC42BPA-210ENST00000462553 NUP88Q99567 741 aaPredicted RBP9.48□□□□□ -0.89
CDC42BPA-210ENST00000462553 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.48□□□□□ -0.89
CDC42BPA-210ENST00000462553 SEMA6BQ9H3T3 888 aa9.48□□□□□ -0.89
CDC42BPA-210ENST00000462553 EPB41L4AQ9HCS5 686 aaPredicted RBP9.48□□□□□ -0.89
CDC42BPA-210ENST00000462553 GOPCQ9HD26 462 aa9.48□□□□□ -0.89
CDC42BPA-210ENST00000462553 ARPP21Q9UBL0 812 aaPredicted RBP9.48□□□□□ -0.89
CDC42BPA-210ENST00000462553 RIPK3Q9Y572 518 aa9.48□□□□□ -0.89
CDC42BPA-210ENST00000462553 DNAJC25-GNG10A0A024R161 153 aa9.47□□□□□ -0.89
CDC42BPA-210ENST00000462553 IGKV6D-41A0A0C4DH26 115 aa9.47□□□□□ -0.89
CDC42BPA-210ENST00000462553 MYADML2A6NDP7 307 aa9.47□□□□□ -0.89
CDC42BPA-210ENST00000462553 ERC2O15083 957 aa9.47□□□□□ -0.89
CDC42BPA-210ENST00000462553 SNAI1O95863 264 aaPredicted RBP9.47□□□□□ -0.89
CDC42BPA-210ENST00000462553 NDUFB10O96000 172 aa9.47□□□□□ -0.89
CDC42BPA-210ENST00000462553 AKR1A1P14550 325 aa9.47□□□□□ -0.89
CDC42BPA-210ENST00000462553 NUCB1Q02818 461 aa9.47□□□□□ -0.89
CDC42BPA-210ENST00000462553 KCTD2Q14681 263 aa9.47□□□□□ -0.89
CDC42BPA-210ENST00000462553 CCSAPQ6IQ19 270 aaPredicted RBP9.47□□□□□ -0.89
CDC42BPA-210ENST00000462553 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.47□□□□□ -0.89
CDC42BPA-210ENST00000462553 RNF180Q86T96 592 aa9.47□□□□□ -0.89
CDC42BPA-210ENST00000462553 MAFAQ8NHW3 353 aaPredicted RBP9.47□□□□□ -0.89
CDC42BPA-210ENST00000462553 MYLIPQ8WY64 445 aa9.47□□□□□ -0.89
CDC42BPA-210ENST00000462553 OSBP2Q969R2 916 aa9.47□□□□□ -0.89
CDC42BPA-210ENST00000462553 SLF1Q9BQI6 1058 aa9.47□□□□□ -0.89
CDC42BPA-210ENST00000462553 RWDD1Q9H446 243 aaPredicted RBP9.47□□□□□ -0.89
CDC42BPA-210ENST00000462553 SYNGAP1Q96PV0 1343 aa9.47□□□□□ -0.89
CDC42BPA-210ENST00000462553 PLIN4Q96Q06 1357 aa9.47□□□□□ -0.89
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