RNA–Protein interactions for RNA: ENST00000462122.1

TRAF3IP1-204, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 922 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-204ENST00000462122 HOXD10P28358 340 aa13.62□□□□□ -0.23
TRAF3IP1-204ENST00000462122 MAPK4P31152 587 aa13.62□□□□□ -0.23
TRAF3IP1-204ENST00000462122 PSMC4P43686 418 aa13.62□□□□□ -0.23
TRAF3IP1-204ENST00000462122 OAZ1P54368 228 aa13.62□□□□□ -0.23
TRAF3IP1-204ENST00000462122 FGD1P98174 961 aa13.62□□□□□ -0.23
TRAF3IP1-204ENST00000462122 TROAPQ12815 778 aa13.62□□□□□ -0.23
TRAF3IP1-204ENST00000462122 COL9A3Q14050 684 aaPredicted RBP13.62□□□□□ -0.23
TRAF3IP1-204ENST00000462122 PKN2Q16513 984 aaKnown RBP13.62□□□□□ -0.23
TRAF3IP1-204ENST00000462122 POTEEQ6S8J3 1075 aa13.62□□□□□ -0.23
TRAF3IP1-204ENST00000462122 NFXL1Q6ZNB6 911 aa13.62□□□□□ -0.23
TRAF3IP1-204ENST00000462122 SGMS1Q86VZ5 419 aa13.62□□□□□ -0.23
TRAF3IP1-204ENST00000462122 REPS2Q8NFH8 660 aa13.62□□□□□ -0.23
TRAF3IP1-204ENST00000462122 MAP3K14Q99558 947 aa13.62□□□□□ -0.23
TRAF3IP1-204ENST00000462122 SPATC1LQ9H0A9 340 aa13.62□□□□□ -0.23
TRAF3IP1-204ENST00000462122 SLC38A10Q9HBR0 1119 aa13.62□□□□□ -0.23
TRAF3IP1-204ENST00000462122 GPCPD1Q9NPB8 672 aa13.62□□□□□ -0.23
TRAF3IP1-204ENST00000462122 PARP14Q460N5 1801 aa13.62□□□□□ -0.23
TRAF3IP1-204ENST00000462122 TNPO2O14787 897 aaKnown RBP13.61□□□□□ -0.23
TRAF3IP1-204ENST00000462122 ATP2A1O14983 1001 aa13.61□□□□□ -0.23
TRAF3IP1-204ENST00000462122 SLC25A27O95847 323 aa13.61□□□□□ -0.23
TRAF3IP1-204ENST00000462122 CALM1P0DP23 149 aa13.61□□□□□ -0.23
TRAF3IP1-204ENST00000462122 CALM2P0DP24 149 aa13.61□□□□□ -0.23
TRAF3IP1-204ENST00000462122 CALM3P0DP25 149 aa13.61□□□□□ -0.23
TRAF3IP1-204ENST00000462122 COPB2P35606 906 aa13.61□□□□□ -0.23
TRAF3IP1-204ENST00000462122 PRMT2P55345 433 aa13.61□□□□□ -0.23
TRAF3IP1-204ENST00000462122 PLS1Q14651 629 aa13.61□□□□□ -0.23
TRAF3IP1-204ENST00000462122 TMEM132BQ14DG7 1078 aa13.61□□□□□ -0.23
TRAF3IP1-204ENST00000462122 Q3C1V9 767 aa13.61□□□□□ -0.23
TRAF3IP1-204ENST00000462122 SYDE2Q5VT97 1194 aa13.61□□□□□ -0.23
TRAF3IP1-204ENST00000462122 OTOP1Q7RTM1 612 aa13.61□□□□□ -0.23
TRAF3IP1-204ENST00000462122 ZNF654Q8IZM8 581 aa13.61□□□□□ -0.23
TRAF3IP1-204ENST00000462122 FBXL16Q8N461 479 aa13.61□□□□□ -0.23
TRAF3IP1-204ENST00000462122 SHCBP1Q8NEM2 672 aa13.61□□□□□ -0.23
TRAF3IP1-204ENST00000462122 COA7Q96BR5 231 aa13.61□□□□□ -0.23
TRAF3IP1-204ENST00000462122 CHMP4CQ96CF2 233 aa13.61□□□□□ -0.23
TRAF3IP1-204ENST00000462122 IL17RAQ96F46 866 aa13.61□□□□□ -0.23
TRAF3IP1-204ENST00000462122 TRIM47Q96LD4 638 aa13.61□□□□□ -0.23
TRAF3IP1-204ENST00000462122 TEX13BQ9BXU2 312 aa13.61□□□□□ -0.23
TRAF3IP1-204ENST00000462122 LRRC2Q9BYS8 371 aa13.61□□□□□ -0.23
TRAF3IP1-204ENST00000462122 ARHGAP39Q9C0H5 1083 aa13.61□□□□□ -0.23
TRAF3IP1-204ENST00000462122 SENP2Q9HC62 589 aa13.61□□□□□ -0.23
TRAF3IP1-204ENST00000462122 ZSWIM6Q9HCJ5 1215 aa13.61□□□□□ -0.23
TRAF3IP1-204ENST00000462122 ZNF214Q9UL59 606 aaPredicted RBP13.61□□□□□ -0.23
TRAF3IP1-204ENST00000462122 PRR12Q9ULL5 1215 aa13.61□□□□□ -0.23
TRAF3IP1-204ENST00000462122 TRIM17Q9Y577 477 aa13.61□□□□□ -0.23
TRAF3IP1-204ENST00000462122 SLC12A7Q9Y666 1083 aa13.61□□□□□ -0.23
TRAF3IP1-204ENST00000462122 CYP46A1Q9Y6A2 500 aa13.61□□□□□ -0.23
TRAF3IP1-204ENST00000462122 CASP8AP2Q9UKL3 1982 aa13.6□□□□□ -0.23
TRAF3IP1-204ENST00000462122 PEX10O60683 326 aa13.6□□□□□ -0.23
TRAF3IP1-204ENST00000462122 GOLGA8HP0CJ92 632 aa13.6□□□□□ -0.23
TRAF3IP1-204ENST00000462122 CTGFP29279 349 aa13.6□□□□□ -0.23
TRAF3IP1-204ENST00000462122 KIF5BP33176 963 aa13.6□□□□□ -0.23
TRAF3IP1-204ENST00000462122 STAT3P40763 770 aa13.6□□□□□ -0.23
TRAF3IP1-204ENST00000462122 GRM4Q14833 912 aa13.6□□□□□ -0.23
TRAF3IP1-204ENST00000462122 TTBK2Q6IQ55 1244 aa13.6□□□□□ -0.23
TRAF3IP1-204ENST00000462122 SYNE3Q6ZMZ3 975 aa13.6□□□□□ -0.23
TRAF3IP1-204ENST00000462122 RUFY3Q7L099 469 aa13.6□□□□□ -0.23
TRAF3IP1-204ENST00000462122 RIOX2Q8IUF8 465 aa13.6□□□□□ -0.23
TRAF3IP1-204ENST00000462122 CTCFLQ8NI51 663 aaPredicted RBP13.6□□□□□ -0.23
TRAF3IP1-204ENST00000462122 TCEANC2Q96MN5 208 aa13.6□□□□□ -0.23
TRAF3IP1-204ENST00000462122 MOV10L1Q9BXT6 1211 aaKnown RBP13.6□□□□□ -0.23
TRAF3IP1-204ENST00000462122 PORCNQ9H237 461 aa13.6□□□□□ -0.23
TRAF3IP1-204ENST00000462122 MROH8Q9H579 483 aa13.6□□□□□ -0.23
TRAF3IP1-204ENST00000462122 UPF2Q9HAU5 1272 aaKnown RBP13.6□□□□□ -0.23
TRAF3IP1-204ENST00000462122 CWC22Q9HCG8 908 aaKnown RBP13.6□□□□□ -0.23
TRAF3IP1-204ENST00000462122 GPHNQ9NQX3 736 aaPredicted RBP13.6□□□□□ -0.23
TRAF3IP1-204ENST00000462122 MAD2L2Q9UI95 211 aa13.6□□□□□ -0.23
TRAF3IP1-204ENST00000462122 PNMA2Q9UL42 364 aa13.6□□□□□ -0.23
TRAF3IP1-204ENST00000462122 PALM3A6NDB9 673 aaPredicted RBP13.59□□□□□ -0.23
TRAF3IP1-204ENST00000462122 CPA1P15085 419 aa13.59□□□□□ -0.23
TRAF3IP1-204ENST00000462122 ERCC3P19447 782 aa13.59□□□□□ -0.23
TRAF3IP1-204ENST00000462122 SLC16A2P36021 539 aa13.59□□□□□ -0.23
TRAF3IP1-204ENST00000462122 RCAN1P53805 252 aa13.59□□□□□ -0.23
TRAF3IP1-204ENST00000462122 SNRNP48Q6IEG0 339 aaKnown RBP13.59□□□□□ -0.23
TRAF3IP1-204ENST00000462122 Q6ZUG5 572 aa13.59□□□□□ -0.23
TRAF3IP1-204ENST00000462122 GPR142Q7Z601 462 aa13.59□□□□□ -0.23
TRAF3IP1-204ENST00000462122 NUP133Q8WUM0 1156 aa13.59□□□□□ -0.23
TRAF3IP1-204ENST00000462122 SOCS4Q8WXH5 440 aa13.59□□□□□ -0.23
TRAF3IP1-204ENST00000462122 AGXT2Q9BYV1 514 aa13.59□□□□□ -0.23
TRAF3IP1-204ENST00000462122 RANBP17Q9H2T7 1088 aaKnown RBP13.59□□□□□ -0.23
TRAF3IP1-204ENST00000462122 SRRDQ9UH36 339 aa13.59□□□□□ -0.23
TRAF3IP1-204ENST00000462122 IVNS1ABPQ9Y6Y0 642 aa13.59□□□□□ -0.23
TRAF3IP1-204ENST00000462122 KLRF2D3W0D1 207 aa13.58□□□□□ -0.24
TRAF3IP1-204ENST00000462122 ECM2O94769 699 aaPredicted RBP13.58□□□□□ -0.24
TRAF3IP1-204ENST00000462122 ICAM1P05362 532 aa13.58□□□□□ -0.24
TRAF3IP1-204ENST00000462122 GNAQP50148 359 aa13.58□□□□□ -0.24
TRAF3IP1-204ENST00000462122 CAP1Q01518 475 aa13.58□□□□□ -0.24
TRAF3IP1-204ENST00000462122 COL13A1Q5TAT6 717 aaPredicted RBP13.58□□□□□ -0.24
TRAF3IP1-204ENST00000462122 WDR78Q5VTH9 848 aa13.58□□□□□ -0.24
TRAF3IP1-204ENST00000462122 APOA5Q6Q788 366 aa13.58□□□□□ -0.24
TRAF3IP1-204ENST00000462122 PLEKHH3Q7Z736 793 aa13.58□□□□□ -0.24
TRAF3IP1-204ENST00000462122 NCAPG2Q86XI2 1143 aa13.58□□□□□ -0.24
TRAF3IP1-204ENST00000462122 CPXCR1Q8N123 301 aa13.58□□□□□ -0.24
TRAF3IP1-204ENST00000462122 LZTS2Q9BRK4 669 aa13.58□□□□□ -0.24
TRAF3IP1-204ENST00000462122 RAVER2Q9HCJ3 691 aaKnown RBP13.58□□□□□ -0.24
TRAF3IP1-204ENST00000462122 PTPN22Q9Y2R2 807 aa13.58□□□□□ -0.24
TRAF3IP1-204ENST00000462122 HTTP42858 3142 aa13.58□□□□□ -0.24
TRAF3IP1-204ENST00000462122 KLF18A0A0U1RQI7 1052 aa13.57□□□□□ -0.24
TRAF3IP1-204ENST00000462122 ZBTB43O43298 467 aa13.57□□□□□ -0.24
TRAF3IP1-204ENST00000462122 STRNO43815 780 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms