RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 ITGB5P18084 799 aa6.28□□□□□ -1.4
LINC00393-202ENST00000452852 ATF4P18848 351 aaPredicted RBP6.28□□□□□ -1.4
LINC00393-202ENST00000452852 NBPF12Q5TAG4 269 aaPredicted RBP6.28□□□□□ -1.4
LINC00393-202ENST00000452852 FBXW10Q5XX13 1052 aa6.28□□□□□ -1.4
LINC00393-202ENST00000452852 TMPRSS7Q7RTY8 843 aa6.28□□□□□ -1.4
LINC00393-202ENST00000452852 CREG2Q8IUH2 290 aa6.28□□□□□ -1.4
LINC00393-202ENST00000452852 GPRASP2Q96D09 838 aa6.28□□□□□ -1.4
LINC00393-202ENST00000452852 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.28□□□□□ -1.4
LINC00393-202ENST00000452852 GPATCH2Q9NW75 528 aa6.28□□□□□ -1.4
LINC00393-202ENST00000452852 MAPKBP1O60336 1514 aa6.28□□□□□ -1.4
LINC00393-202ENST00000452852 IQGAP2Q13576 1575 aa6.27□□□□□ -1.41
LINC00393-202ENST00000452852 CARMIL2Q6F5E8 1435 aa6.27□□□□□ -1.41
LINC00393-202ENST00000452852 SHISA3A0PJX4 238 aa6.27□□□□□ -1.41
LINC00393-202ENST00000452852 TNFRSF10CO14798 259 aa6.27□□□□□ -1.41
LINC00393-202ENST00000452852 PAPLNO95428 1278 aa6.27□□□□□ -1.41
LINC00393-202ENST00000452852 IMPDH2P12268 514 aa6.27□□□□□ -1.41
LINC00393-202ENST00000452852 CCNFP41002 786 aa6.27□□□□□ -1.41
LINC00393-202ENST00000452852 GJA8P48165 433 aa6.27□□□□□ -1.41
LINC00393-202ENST00000452852 RNF4P78317 190 aa6.27□□□□□ -1.41
LINC00393-202ENST00000452852 GAB4Q2WGN9 574 aa6.27□□□□□ -1.41
LINC00393-202ENST00000452852 ATG4DQ86TL0 474 aaPredicted RBP6.27□□□□□ -1.41
LINC00393-202ENST00000452852 TSPYL5Q86VY4 417 aaPredicted RBP6.27□□□□□ -1.41
LINC00393-202ENST00000452852 TMEM192Q8IY95 271 aa6.27□□□□□ -1.41
LINC00393-202ENST00000452852 ZNF512BQ96KM6 892 aaPredicted RBP6.27□□□□□ -1.41
LINC00393-202ENST00000452852 SLC9A7Q96T83 725 aa6.27□□□□□ -1.41
LINC00393-202ENST00000452852 HIRIP3Q9BW71 556 aaPredicted RBP6.27□□□□□ -1.41
LINC00393-202ENST00000452852 EFR3BQ9Y2G0 817 aa6.27□□□□□ -1.41
LINC00393-202ENST00000452852 TMA7Q9Y2S6 64 aaKnown RBP6.27□□□□□ -1.41
LINC00393-202ENST00000452852 DIP2BQ9P265 1576 aa6.27□□□□□ -1.41
LINC00393-202ENST00000452852 FAM86C2PA6NEL3 165 aa6.26□□□□□ -1.41
LINC00393-202ENST00000452852 CLEC3AO75596 197 aa6.26□□□□□ -1.41
LINC00393-202ENST00000452852 ACRP10323 421 aa6.26□□□□□ -1.41
LINC00393-202ENST00000452852 JUNBP17275 347 aaPredicted RBP6.26□□□□□ -1.41
LINC00393-202ENST00000452852 COL9A2Q14055 689 aaPredicted RBP6.26□□□□□ -1.41
LINC00393-202ENST00000452852 BMS1Q14692 1282 aaKnown RBP6.26□□□□□ -1.41
LINC00393-202ENST00000452852 CCDC81Q6ZN84 652 aa6.26□□□□□ -1.41
LINC00393-202ENST00000452852 RASGRP4Q8TDF6 673 aa6.26□□□□□ -1.41
LINC00393-202ENST00000452852 SLC6A18Q96N87 628 aa6.26□□□□□ -1.41
LINC00393-202ENST00000452852 OSBPL2Q9H1P3 480 aa6.26□□□□□ -1.41
LINC00393-202ENST00000452852 DUSP13Q9UII6 198 aa6.26□□□□□ -1.41
LINC00393-202ENST00000452852 CTNND2Q9UQB3 1225 aa6.26□□□□□ -1.41
LINC00393-202ENST00000452852 CARMIL1Q5VZK9 1371 aa6.26□□□□□ -1.41
LINC00393-202ENST00000452852 ABCC10Q5T3U5 1492 aa6.26□□□□□ -1.41
LINC00393-202ENST00000452852 CTTNBP2Q8WZ74 1663 aa6.26□□□□□ -1.41
LINC00393-202ENST00000452852 TTBK1Q5TCY1 1321 aaPredicted RBP6.25□□□□□ -1.41
LINC00393-202ENST00000452852 BIN1O00499 593 aa6.25□□□□□ -1.41
LINC00393-202ENST00000452852 SOX9P48436 509 aa6.25□□□□□ -1.41
LINC00393-202ENST00000452852 NBPF9Q3BBW0 867 aa6.25□□□□□ -1.41
LINC00393-202ENST00000452852 INTS3Q68E01 1043 aaKnown RBP6.25□□□□□ -1.41
LINC00393-202ENST00000452852 RUFY4Q6ZNE9 571 aa6.25□□□□□ -1.41
LINC00393-202ENST00000452852 RBBP8NLQ8NC74 664 aaPredicted RBP6.25□□□□□ -1.41
LINC00393-202ENST00000452852 ALPK1Q96QP1 1244 aa6.25□□□□□ -1.41
LINC00393-202ENST00000452852 SLAMF8Q9P0V8 285 aa6.25□□□□□ -1.41
LINC00393-202ENST00000452852 KDM6BO15054 1643 aa6.25□□□□□ -1.41
LINC00393-202ENST00000452852 DNAJC25-GNG10A0A024R161 153 aa6.24□□□□□ -1.41
LINC00393-202ENST00000452852 NCLP19338 710 aaKnown RBP6.24□□□□□ -1.41
LINC00393-202ENST00000452852 LTKP29376 864 aa6.24□□□□□ -1.41
LINC00393-202ENST00000452852 EGR3Q06889 387 aa6.24□□□□□ -1.41
LINC00393-202ENST00000452852 NMIQ13287 307 aaPredicted RBP6.24□□□□□ -1.41
LINC00393-202ENST00000452852 SNW1Q13573 536 aaKnown RBP6.24□□□□□ -1.41
LINC00393-202ENST00000452852 CLEC16AQ2KHT3 1053 aa6.24□□□□□ -1.41
LINC00393-202ENST00000452852 RALGPS1Q5JS13 557 aa6.24□□□□□ -1.41
LINC00393-202ENST00000452852 LCE5AQ5TCM9 118 aa6.24□□□□□ -1.41
LINC00393-202ENST00000452852 SOGA3Q5TF21 947 aa6.24□□□□□ -1.41
LINC00393-202ENST00000452852 SDE2Q6IQ49 451 aa6.24□□□□□ -1.41
LINC00393-202ENST00000452852 TMC3Q7Z5M5 1100 aa6.24□□□□□ -1.41
LINC00393-202ENST00000452852 LSRQ86X29 649 aaPredicted RBP6.24□□□□□ -1.41
LINC00393-202ENST00000452852 FLAD1Q8NFF5 587 aa6.24□□□□□ -1.41
LINC00393-202ENST00000452852 TM9SF2Q99805 663 aa6.24□□□□□ -1.41
LINC00393-202ENST00000452852 ASCC2Q9H1I8 757 aaPredicted RBP6.24□□□□□ -1.41
LINC00393-202ENST00000452852 C19orf73Q9NVV2 129 aa6.24□□□□□ -1.41
LINC00393-202ENST00000452852 PCDHA11Q9Y5I1 949 aa6.24□□□□□ -1.41
LINC00393-202ENST00000452852 PTPRGP23470 1445 aa6.24□□□□□ -1.41
LINC00393-202ENST00000452852 TNIKQ9UKE5 1360 aa6.23□□□□□ -1.41
LINC00393-202ENST00000452852 SBNO2Q9Y2G9 1366 aa6.23□□□□□ -1.41
LINC00393-202ENST00000452852 TAB3Q8N5C8 712 aaPredicted RBP6.23□□□□□ -1.41
LINC00393-202ENST00000452852 CRBNQ96SW2 442 aa6.23□□□□□ -1.41
LINC00393-202ENST00000452852 MKRN2Q9H000 416 aaKnown RBP6.23□□□□□ -1.41
LINC00393-202ENST00000452852 ADAMTS10Q9H324 1103 aa6.23□□□□□ -1.41
LINC00393-202ENST00000452852 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.23□□□□□ -1.41
LINC00393-202ENST00000452852 TBX22Q9Y458 520 aa6.23□□□□□ -1.41
LINC00393-202ENST00000452852 RAPGEF2Q9Y4G8 1499 aa6.22□□□□□ -1.41
LINC00393-202ENST00000452852 SSBP05455 408 aaKnown RBP eCLIP6.22□□□□□ -1.41
LINC00393-202ENST00000452852 GUCY2CP25092 1073 aa6.22□□□□□ -1.41
LINC00393-202ENST00000452852 GDNFP39905 211 aa6.22□□□□□ -1.41
LINC00393-202ENST00000452852 NASPP49321 788 aaPredicted RBP6.22□□□□□ -1.41
LINC00393-202ENST00000452852 EIF6P56537 245 aaKnown RBP6.22□□□□□ -1.41
LINC00393-202ENST00000452852 ZYXQ15942 572 aaKnown RBP6.22□□□□□ -1.41
LINC00393-202ENST00000452852 FYB2Q5VWT5 728 aa6.22□□□□□ -1.41
LINC00393-202ENST00000452852 TTC6Q86TZ1 520 aa6.22□□□□□ -1.41
LINC00393-202ENST00000452852 JAZF1Q86VZ6 243 aa6.22□□□□□ -1.41
LINC00393-202ENST00000452852 NLGN1Q8N2Q7 840 aa6.22□□□□□ -1.41
LINC00393-202ENST00000452852 ENOX1Q8TC92 643 aaKnown RBP6.22□□□□□ -1.41
LINC00393-202ENST00000452852 SYTL5Q8TDW5 730 aaPredicted RBP6.22□□□□□ -1.41
LINC00393-202ENST00000452852 DHRS1Q96LJ7 313 aa6.22□□□□□ -1.41
LINC00393-202ENST00000452852 HDAC8Q9BY41 377 aa6.22□□□□□ -1.41
LINC00393-202ENST00000452852 PRDM14Q9GZV8 571 aa6.22□□□□□ -1.41
LINC00393-202ENST00000452852 SUCOQ9UBS9 1254 aaKnown RBP6.22□□□□□ -1.41
LINC00393-202ENST00000452852 TMEM59LQ9UK28 342 aa6.22□□□□□ -1.41
LINC00393-202ENST00000452852 MRVI1Q9Y6F6 885 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms