RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 TRIM34Q9BYJ4 488 aa20.23■□□□□ 0.83
LMNA-208ENST00000448611 VAT1LQ9HCJ6 419 aa20.23■□□□□ 0.83
LMNA-208ENST00000448611 NAPAP54920 295 aa20.23■□□□□ 0.83
LMNA-208ENST00000448611 PTGDRQ13258 359 aa20.23■□□□□ 0.83
LMNA-208ENST00000448611 MKL1Q969V6 931 aa20.23■□□□□ 0.83
LMNA-208ENST00000448611 KANSL2Q9H9L4 492 aa20.23■□□□□ 0.83
LMNA-208ENST00000448611 NYAP2Q9P242 653 aa20.23■□□□□ 0.83
LMNA-208ENST00000448611 TUBE1Q9UJT0 475 aa20.23■□□□□ 0.83
LMNA-208ENST00000448611 DLGAP5Q15398 846 aa20.22■□□□□ 0.83
LMNA-208ENST00000448611 USP49Q70CQ1 688 aa20.22■□□□□ 0.83
LMNA-208ENST00000448611 OGFOD1Q8N543 542 aa20.22■□□□□ 0.83
LMNA-208ENST00000448611 AGBL3Q8NEM8 1001 aa20.22■□□□□ 0.83
LMNA-208ENST00000448611 GPCPD1Q9NPB8 672 aa20.22■□□□□ 0.83
LMNA-208ENST00000448611 TMOD2Q9NZR1 351 aa20.22■□□□□ 0.83
LMNA-208ENST00000448611 MYH4Q9Y623 1939 aa20.22■□□□□ 0.83
LMNA-208ENST00000448611 CCDC194A0A1B0GVG4 234 aa20.21■□□□□ 0.83
LMNA-208ENST00000448611 ESPNB1AK53 854 aa20.21■□□□□ 0.83
LMNA-208ENST00000448611 hCG_1984214I3L0E3 225 aa20.21■□□□□ 0.83
LMNA-208ENST00000448611 EEF2P13639 858 aaKnown RBP20.21■□□□□ 0.83
LMNA-208ENST00000448611 ATP2B2Q01814 1243 aa20.21■□□□□ 0.83
LMNA-208ENST00000448611 GPATCH4Q5T3I0 446 aaKnown RBP20.21■□□□□ 0.83
LMNA-208ENST00000448611 SIAH1Q8IUQ4 282 aa20.21■□□□□ 0.83
LMNA-208ENST00000448611 CEP57L1Q8IYX8 460 aa20.21■□□□□ 0.83
LMNA-208ENST00000448611 ZNF713Q8N859 430 aaPredicted RBP20.21■□□□□ 0.83
LMNA-208ENST00000448611 CNNM3Q8NE01 707 aa20.21■□□□□ 0.83
LMNA-208ENST00000448611 RRAGDQ9NQL2 400 aaPredicted RBP20.21■□□□□ 0.83
LMNA-208ENST00000448611 ZNF70Q9UC06 446 aaPredicted RBP20.21■□□□□ 0.83
LMNA-208ENST00000448611 ESYT2A0FGR8 921 aa20.21■□□□□ 0.83
LMNA-208ENST00000448611 MDM2Q00987 491 aaPredicted RBP20.21■□□□□ 0.83
LMNA-208ENST00000448611 CXCL9Q07325 125 aa20.21■□□□□ 0.83
LMNA-208ENST00000448611 TMEM179Q6ZVK1 233 aa20.21■□□□□ 0.83
LMNA-208ENST00000448611 CSRNP1Q96S65 589 aa20.21■□□□□ 0.83
LMNA-208ENST00000448611 TAOK3Q9H2K8 898 aa20.21■□□□□ 0.83
LMNA-208ENST00000448611 FER1L6Q2WGJ9 1857 aa20.2■□□□□ 0.82
LMNA-208ENST00000448611 CLRN2A0PK11 232 aa20.2■□□□□ 0.82
LMNA-208ENST00000448611 SMCO2A6NFE2 343 aa20.2■□□□□ 0.82
LMNA-208ENST00000448611 TCP10L2B9ZVM9 353 aa20.2■□□□□ 0.82
LMNA-208ENST00000448611 POLR2DO15514 142 aaKnown RBP20.2■□□□□ 0.82
LMNA-208ENST00000448611 MCM7P33993 719 aa20.2■□□□□ 0.82
LMNA-208ENST00000448611 PLCB2Q00722 1185 aa20.2■□□□□ 0.82
LMNA-208ENST00000448611 SEPT2Q15019 361 aa20.2■□□□□ 0.82
LMNA-208ENST00000448611 DPCR1Q3MIW9 517 aa20.2■□□□□ 0.82
LMNA-208ENST00000448611 SPDYE2Q495Y8 402 aa20.2■□□□□ 0.82
LMNA-208ENST00000448611 C4orf32Q8N8J7 132 aa20.2■□□□□ 0.82
LMNA-208ENST00000448611 MTMR14Q8NCE2 650 aa20.2■□□□□ 0.82
LMNA-208ENST00000448611 JMJD4Q9H9V9 463 aa20.2■□□□□ 0.82
LMNA-208ENST00000448611 C6orf50Q9HD87 102 aa20.2■□□□□ 0.82
LMNA-208ENST00000448611 CCDC39Q9UFE4 941 aa20.2■□□□□ 0.82
LMNA-208ENST00000448611 GNA11P29992 359 aa20.19■□□□□ 0.82
LMNA-208ENST00000448611 NLRP12P59046 1061 aa20.19■□□□□ 0.82
LMNA-208ENST00000448611 PNOCQ13519 176 aa20.19■□□□□ 0.82
LMNA-208ENST00000448611 ABCB5Q2M3G0 1257 aa20.19■□□□□ 0.82
LMNA-208ENST00000448611 TTBK2Q6IQ55 1244 aa20.19■□□□□ 0.82
LMNA-208ENST00000448611 DHX40Q8IX18 779 aaKnown RBP20.19■□□□□ 0.82
LMNA-208ENST00000448611 ADGRF4Q8IZF3 695 aa20.19■□□□□ 0.82
LMNA-208ENST00000448611 GDF11O95390 407 aa20.19■□□□□ 0.82
LMNA-208ENST00000448611 ZRSR1Q15695 479 aaKnown RBP20.19■□□□□ 0.82
LMNA-208ENST00000448611 FAM151AQ8WW52 585 aa20.19■□□□□ 0.82
LMNA-208ENST00000448611 EPSTI1Q96J88 318 aa20.19■□□□□ 0.82
LMNA-208ENST00000448611 NAT10Q9H0A0 1025 aaKnown RBP20.19■□□□□ 0.82
LMNA-208ENST00000448611 HERC5Q9UII4 1024 aaKnown RBP20.19■□□□□ 0.82
LMNA-208ENST00000448611 CNTNAP1P78357 1384 aa20.19■□□□□ 0.82
LMNA-208ENST00000448611 VWA3AA6NCI4 1184 aa20.18■□□□□ 0.82
LMNA-208ENST00000448611 BIN1O00499 593 aa20.18■□□□□ 0.82
LMNA-208ENST00000448611 ACTN4O43707 911 aaKnown RBP20.18■□□□□ 0.82
LMNA-208ENST00000448611 JAG1P78504 1218 aa20.18■□□□□ 0.82
LMNA-208ENST00000448611 ICA1Q05084 483 aa20.18■□□□□ 0.82
LMNA-208ENST00000448611 RRP1BQ14684 758 aaKnown RBP20.18■□□□□ 0.82
LMNA-208ENST00000448611 IL17AQ16552 155 aa20.18■□□□□ 0.82
LMNA-208ENST00000448611 INF2Q27J81 1249 aa20.18■□□□□ 0.82
LMNA-208ENST00000448611 CCDC96Q2M329 555 aa20.18■□□□□ 0.82
LMNA-208ENST00000448611 ARL6IP4Q66PJ3 421 aaKnown RBP20.18■□□□□ 0.82
LMNA-208ENST00000448611 KRT25Q7Z3Z0 450 aa20.18■□□□□ 0.82
LMNA-208ENST00000448611 ZSCAN30Q86W11 494 aa20.18■□□□□ 0.82
LMNA-208ENST00000448611 SYMPKQ92797 1274 aaKnown RBP20.18■□□□□ 0.82
LMNA-208ENST00000448611 BPIFA3Q9BQP9 254 aa20.18■□□□□ 0.82
LMNA-208ENST00000448611 SERTAD1Q9UHV2 236 aa20.18■□□□□ 0.82
LMNA-208ENST00000448611 A0A087X0B3 334 aa20.17■□□□□ 0.82
LMNA-208ENST00000448611 PNMA6FA0A0J9YX94 578 aa20.17■□□□□ 0.82
LMNA-208ENST00000448611 NFKBIEO00221 500 aa20.17■□□□□ 0.82
LMNA-208ENST00000448611 FOXN1O15353 648 aa20.17■□□□□ 0.82
LMNA-208ENST00000448611 KCTD1Q719H9 257 aa20.17■□□□□ 0.82
LMNA-208ENST00000448611 DCAF4Q8WV16 495 aa20.17■□□□□ 0.82
LMNA-208ENST00000448611 MTMR8Q96EF0 704 aa20.17■□□□□ 0.82
LMNA-208ENST00000448611 ZBED3Q96IU2 234 aaPredicted RBP20.17■□□□□ 0.82
LMNA-208ENST00000448611 RTN4Q9NQC3 1192 aaKnown RBP20.17■□□□□ 0.82
LMNA-208ENST00000448611 FKBP1CQ5VVH2 108 aa20.17■□□□□ 0.82
LMNA-208ENST00000448611 PDILTQ8N807 584 aa20.17■□□□□ 0.82
LMNA-208ENST00000448611 GOLGA6L19H0YKK7 550 aa20.16■□□□□ 0.82
LMNA-208ENST00000448611 PPP1R11O60927 126 aaPredicted RBP20.16■□□□□ 0.82
LMNA-208ENST00000448611 SLC16A2P36021 539 aa20.16■□□□□ 0.82
LMNA-208ENST00000448611 RBM26Q5T8P6 1007 aaKnown RBP20.16■□□□□ 0.82
LMNA-208ENST00000448611 SLFN13Q68D06 897 aa20.16■□□□□ 0.82
LMNA-208ENST00000448611 CIAPIN1Q6FI81 312 aa20.16■□□□□ 0.82
LMNA-208ENST00000448611 COA7Q96BR5 231 aa20.16■□□□□ 0.82
LMNA-208ENST00000448611 HOOK1Q9UJC3 728 aaKnown RBP20.16■□□□□ 0.82
LMNA-208ENST00000448611 PCDHA5Q9Y5H7 936 aa20.16■□□□□ 0.82
LMNA-208ENST00000448611 ARFGEF1Q9Y6D6 1849 aa20.16■□□□□ 0.82
LMNA-208ENST00000448611 GH2P01242 217 aa20.15■□□□□ 0.82
LMNA-208ENST00000448611 YBX3P16989 372 aaKnown RBP eCLIP20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms